RNA–Protein interactions for RNA: ENST00000409782.5

LSM5-203, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 649 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-203ENST00000409782 TEX22C9J3V5 150 aa6.31□□□□□ -1.4
LSM5-203ENST00000409782 ANKRD63C9JTQ0 380 aa6.31□□□□□ -1.4
LSM5-203ENST00000409782 I3L4J1 428 aa6.31□□□□□ -1.4
LSM5-203ENST00000409782 M0R296 226 aa6.31□□□□□ -1.4
LSM5-203ENST00000409782 VILLO15195 856 aa6.31□□□□□ -1.4
LSM5-203ENST00000409782 ZNF185O15231 689 aa6.31□□□□□ -1.4
LSM5-203ENST00000409782 POLR2DO15514 142 aaKnown RBP6.31□□□□□ -1.4
LSM5-203ENST00000409782 EXTL3O43909 919 aa6.31□□□□□ -1.4
LSM5-203ENST00000409782 SEC14L2O76054 403 aa6.31□□□□□ -1.4
LSM5-203ENST00000409782 OAZ2O95190 189 aa6.31□□□□□ -1.4
LSM5-203ENST00000409782 ONECUT2O95948 504 aa6.31□□□□□ -1.4
LSM5-203ENST00000409782 ODC1P11926 461 aa6.31□□□□□ -1.4
LSM5-203ENST00000409782 HARS2P49590 506 aaKnown RBP6.31□□□□□ -1.4
LSM5-203ENST00000409782 ACOT2P49753 483 aa6.31□□□□□ -1.4
LSM5-203ENST00000409782 SELENOPP49908 381 aa6.31□□□□□ -1.4
LSM5-203ENST00000409782 EIF3BP55884 814 aaKnown RBP6.31□□□□□ -1.4
LSM5-203ENST00000409782 TAS2R50P59544 299 aa6.31□□□□□ -1.4
LSM5-203ENST00000409782 SNRPFP62306 86 aaKnown RBP6.31□□□□□ -1.4
LSM5-203ENST00000409782 YWHAHQ04917 246 aaPredicted RBP6.31□□□□□ -1.4
LSM5-203ENST00000409782 SPAG1Q07617 926 aa6.31□□□□□ -1.4
LSM5-203ENST00000409782 PUM1Q14671 1186 aaKnown RBP eCLIP6.31□□□□□ -1.4
LSM5-203ENST00000409782 TBCCQ15814 346 aa6.31□□□□□ -1.4
LSM5-203ENST00000409782 CD300EQ496F6 205 aaPredicted RBP6.31□□□□□ -1.4
LSM5-203ENST00000409782 PLEKHS1Q5SXH7 462 aa6.31□□□□□ -1.4
LSM5-203ENST00000409782 C9orf57Q5W0N0 161 aa6.31□□□□□ -1.4
LSM5-203ENST00000409782 GRHL2Q6ISB3 625 aa6.31□□□□□ -1.4
LSM5-203ENST00000409782 ARMCX5Q6P1M9 558 aa6.31□□□□□ -1.4
LSM5-203ENST00000409782 WDR93Q6P2C0 686 aa6.31□□□□□ -1.4
LSM5-203ENST00000409782 ZNF585AQ6P3V2 769 aa6.31□□□□□ -1.4
LSM5-203ENST00000409782 SZRD1Q7Z422 152 aa6.31□□□□□ -1.4
LSM5-203ENST00000409782 GDF7Q7Z4P5 450 aa6.31□□□□□ -1.4
LSM5-203ENST00000409782 CAND1Q86VP6 1230 aaKnown RBP6.31□□□□□ -1.4
LSM5-203ENST00000409782 CEP57L1Q8IYX8 460 aa6.31□□□□□ -1.4
LSM5-203ENST00000409782 SYCP3Q8IZU3 236 aa6.31□□□□□ -1.4
LSM5-203ENST00000409782 ZNF461Q8TAF7 563 aa6.31□□□□□ -1.4
LSM5-203ENST00000409782 TMEM125Q96AQ2 219 aa6.31□□□□□ -1.4
LSM5-203ENST00000409782 CTHRC1Q96CG8 243 aa6.31□□□□□ -1.4
LSM5-203ENST00000409782 TRMT61AQ96FX7 289 aaKnown RBP6.31□□□□□ -1.4
LSM5-203ENST00000409782 ZNF560Q96MR9 790 aa6.31□□□□□ -1.4
LSM5-203ENST00000409782 CBWD1Q9BRT8 395 aa6.31□□□□□ -1.4
LSM5-203ENST00000409782 FAM213AQ9BRX8 229 aa6.31□□□□□ -1.4
LSM5-203ENST00000409782 FGFBP2Q9BYJ0 223 aa6.31□□□□□ -1.4
LSM5-203ENST00000409782 PANK2Q9BZ23 570 aa6.31□□□□□ -1.4
LSM5-203ENST00000409782 RBAKQ9NYW8 714 aaPredicted RBP6.31□□□□□ -1.4
LSM5-203ENST00000409782 RAB21Q9UL25 225 aa6.31□□□□□ -1.4
LSM5-203ENST00000409782 SLC12A4Q9UP95 1085 aa6.31□□□□□ -1.4
LSM5-203ENST00000409782 ZFP37Q9Y6Q3 630 aaPredicted RBP6.31□□□□□ -1.4
LSM5-203ENST00000409782 FAM237AA0A1B0GTK4 181 aa6.3□□□□□ -1.4
LSM5-203ENST00000409782 PVALEFA0A1B0GWK0 134 aa6.3□□□□□ -1.4
LSM5-203ENST00000409782 WDR27A2RRH5 827 aa6.3□□□□□ -1.4
LSM5-203ENST00000409782 PABPN1LA6NDY0 278 aaKnown RBP6.3□□□□□ -1.4
LSM5-203ENST00000409782 PIRO00625 290 aa6.3□□□□□ -1.4
LSM5-203ENST00000409782 PRRG1O14668 218 aa6.3□□□□□ -1.4
LSM5-203ENST00000409782 PPEF2O14830 753 aa6.3□□□□□ -1.4
LSM5-203ENST00000409782 N4BP1O75113 896 aaKnown RBP6.3□□□□□ -1.4
LSM5-203ENST00000409782 PFKFB1P16118 471 aa6.3□□□□□ -1.4
LSM5-203ENST00000409782 ZNF20P17024 532 aa6.3□□□□□ -1.4
LSM5-203ENST00000409782 CMA1P23946 247 aa6.3□□□□□ -1.4
LSM5-203ENST00000409782 TAF6P49848 677 aa6.3□□□□□ -1.4
LSM5-203ENST00000409782 TERF1P54274 439 aa6.3□□□□□ -1.4
LSM5-203ENST00000409782 AIMP2Q13155 320 aaKnown RBP6.3□□□□□ -1.4
LSM5-203ENST00000409782 PLD1Q13393 1074 aa6.3□□□□□ -1.4
LSM5-203ENST00000409782 MYBPC2Q14324 1141 aa6.3□□□□□ -1.4
LSM5-203ENST00000409782 GEN1Q17RS7 908 aa6.3□□□□□ -1.4
LSM5-203ENST00000409782 TMEM88Q6PEY1 159 aa6.3□□□□□ -1.4
LSM5-203ENST00000409782 C16orf89Q6UX73 402 aa6.3□□□□□ -1.4
LSM5-203ENST00000409782 CRELD2Q6UXH1 353 aaPredicted RBP6.3□□□□□ -1.4
LSM5-203ENST00000409782 GET4Q7L5D6 327 aaPredicted RBP6.3□□□□□ -1.4
LSM5-203ENST00000409782 GRASPQ7Z6J2 395 aaPredicted RBP6.3□□□□□ -1.4
LSM5-203ENST00000409782 ADGRG6Q86SQ4 1221 aa6.3□□□□□ -1.4
LSM5-203ENST00000409782 C12orf56Q8IXR9 622 aa6.3□□□□□ -1.4
LSM5-203ENST00000409782 EFCAB13Q8IY85 973 aa6.3□□□□□ -1.4
LSM5-203ENST00000409782 GPD1LQ8N335 351 aa6.3□□□□□ -1.4
LSM5-203ENST00000409782 TTC39CQ8N584 583 aa6.3□□□□□ -1.4
LSM5-203ENST00000409782 LRRC52Q8N7C0 313 aa6.3□□□□□ -1.4
LSM5-203ENST00000409782 ENDOVQ8N8Q3 282 aaKnown RBP6.3□□□□□ -1.4
LSM5-203ENST00000409782 PNPLA1Q8N8W4 532 aa6.3□□□□□ -1.4
LSM5-203ENST00000409782 LEMD2Q8NC56 503 aa6.3□□□□□ -1.4
LSM5-203ENST00000409782 BEND2Q8NDZ0 799 aa6.3□□□□□ -1.4
LSM5-203ENST00000409782 GOLGA5Q8TBA6 731 aa6.3□□□□□ -1.4
LSM5-203ENST00000409782 NACC2Q96BF6 587 aa6.3□□□□□ -1.4
LSM5-203ENST00000409782 MYADMQ96S97 322 aa6.3□□□□□ -1.4
LSM5-203ENST00000409782 C1QTNF3Q9BXJ4 246 aa6.3□□□□□ -1.4
LSM5-203ENST00000409782 GPR87Q9BY21 358 aa6.3□□□□□ -1.4
LSM5-203ENST00000409782 ACTRT3Q9BYD9 372 aa6.3□□□□□ -1.4
LSM5-203ENST00000409782 SCAND2PQ9GZW5 306 aaPredicted RBP6.3□□□□□ -1.4
LSM5-203ENST00000409782 IKZF4Q9H2S9 585 aa6.3□□□□□ -1.4
LSM5-203ENST00000409782 CDCP1Q9H5V8 836 aa6.3□□□□□ -1.4
LSM5-203ENST00000409782 AGPAT3Q9NRZ7 376 aa6.3□□□□□ -1.4
LSM5-203ENST00000409782 CGNQ9P2M7 1197 aaKnown RBP6.3□□□□□ -1.4
LSM5-203ENST00000409782 ITGA11Q9UKX5 1188 aa6.3□□□□□ -1.4
LSM5-203ENST00000409782 CDH7Q9ULB5 785 aa6.3□□□□□ -1.4
LSM5-203ENST00000409782 DUSP12Q9UNI6 340 aa6.3□□□□□ -1.4
LSM5-203ENST00000409782 YIPF1Q9Y548 306 aa6.3□□□□□ -1.4
LSM5-203ENST00000409782 INSL5Q9Y5Q6 135 aa6.3□□□□□ -1.4
LSM5-203ENST00000409782 COPG1Q9Y678 874 aaKnown RBP6.3□□□□□ -1.4
LSM5-203ENST00000409782 TRIOO75962 3097 aa6.3□□□□□ -1.4
LSM5-203ENST00000409782 A1L4Q6 167 aa6.29□□□□□ -1.4
LSM5-203ENST00000409782 ZNF233A6NK53 670 aa6.29□□□□□ -1.4
LSM5-203ENST00000409782 LIPT2A6NK58 231 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms