RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 EDDM13A0A1B0GTR0 161 aa11.29□□□□□ -0.6
SNX13-202ENST00000409604 TMEM247A6NEH6 219 aa11.29□□□□□ -0.6
SNX13-202ENST00000409604 ANKDD1BA6NHY2 528 aa11.29□□□□□ -0.6
SNX13-202ENST00000409604 FAM170BA6NMN3 283 aa11.29□□□□□ -0.6
SNX13-202ENST00000409604 RPL38P63173 70 aaKnown RBP11.29□□□□□ -0.6
SNX13-202ENST00000409604 ACSM2AQ08AH3 577 aa11.29□□□□□ -0.6
SNX13-202ENST00000409604 ILF3Q12906 894 aaKnown RBP eCLIP11.29□□□□□ -0.6
SNX13-202ENST00000409604 CYTH1Q15438 398 aa11.29□□□□□ -0.6
SNX13-202ENST00000409604 DGKKQ5KSL6 1271 aa11.29□□□□□ -0.6
SNX13-202ENST00000409604 GPRC6AQ5T6X5 926 aa11.29□□□□□ -0.6
SNX13-202ENST00000409604 ACBD5Q5T8D3 534 aaPredicted RBP11.29□□□□□ -0.6
SNX13-202ENST00000409604 ACSM2BQ68CK6 577 aa11.29□□□□□ -0.6
SNX13-202ENST00000409604 ZBTB2Q8N680 514 aa11.29□□□□□ -0.6
SNX13-202ENST00000409604 CCDC126Q96EE4 140 aa11.29□□□□□ -0.6
SNX13-202ENST00000409604 IMP4Q96G21 291 aaKnown RBP11.29□□□□□ -0.6
SNX13-202ENST00000409604 MTERF1Q99551 399 aaKnown RBP11.29□□□□□ -0.6
SNX13-202ENST00000409604 NOL11Q9H8H0 719 aaKnown RBP11.29□□□□□ -0.6
SNX13-202ENST00000409604 I6L893 689 aaPredicted RBP11.29□□□□□ -0.6
SNX13-202ENST00000409604 ALAS2P22557 587 aa11.29□□□□□ -0.6
SNX13-202ENST00000409604 ABCE1P61221 599 aaKnown RBP11.29□□□□□ -0.6
SNX13-202ENST00000409604 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.29□□□□□ -0.6
SNX13-202ENST00000409604 ATP6AP1LQ52LC2 224 aa11.29□□□□□ -0.6
SNX13-202ENST00000409604 PLD6Q8N2A8 252 aaKnown RBP11.29□□□□□ -0.6
SNX13-202ENST00000409604 FAR2Q96K12 515 aa11.29□□□□□ -0.6
SNX13-202ENST00000409604 PADI4Q9UM07 663 aa11.29□□□□□ -0.6
SNX13-202ENST00000409604 RNF103-CHMP3A0A140T963 221 aa11.29□□□□□ -0.6
SNX13-202ENST00000409604 TMEM233B4DJY2 109 aa11.29□□□□□ -0.6
SNX13-202ENST00000409604 ARHGEF15O94989 841 aa11.29□□□□□ -0.6
SNX13-202ENST00000409604 HGFP14210 728 aa11.29□□□□□ -0.6
SNX13-202ENST00000409604 TNNI3P19429 210 aa11.29□□□□□ -0.6
SNX13-202ENST00000409604 HOXD9P28356 352 aaPredicted RBP11.29□□□□□ -0.6
SNX13-202ENST00000409604 SCAPQ12770 1279 aa11.29□□□□□ -0.6
SNX13-202ENST00000409604 TEDDM1Q5T9Z0 273 aa11.29□□□□□ -0.6
SNX13-202ENST00000409604 ZNF776Q68DI1 518 aaPredicted RBP11.29□□□□□ -0.6
SNX13-202ENST00000409604 PLD3Q8IV08 490 aa11.29□□□□□ -0.6
SNX13-202ENST00000409604 ADGRG2Q8IZP9 1017 aa11.29□□□□□ -0.6
SNX13-202ENST00000409604 MREGQ8N565 214 aa11.29□□□□□ -0.6
SNX13-202ENST00000409604 OVCA2Q8WZ82 227 aa11.29□□□□□ -0.6
SNX13-202ENST00000409604 PIGKQ92643 395 aa11.29□□□□□ -0.6
SNX13-202ENST00000409604 SKA1Q96BD8 255 aa11.29□□□□□ -0.6
SNX13-202ENST00000409604 ECSITQ9BQ95 431 aa11.29□□□□□ -0.6
SNX13-202ENST00000409604 FPGTO14772 594 aa11.28□□□□□ -0.6
SNX13-202ENST00000409604 ULK1O75385 1050 aa11.28□□□□□ -0.6
SNX13-202ENST00000409604 ASLP04424 464 aa11.28□□□□□ -0.6
SNX13-202ENST00000409604 IDSP22304 550 aa11.28□□□□□ -0.6
SNX13-202ENST00000409604 TCHHL1Q5QJ38 904 aaPredicted RBP11.28□□□□□ -0.6
SNX13-202ENST00000409604 CACHD1Q5VU97 1274 aa11.28□□□□□ -0.6
SNX13-202ENST00000409604 IRGCQ6NXR0 463 aa11.28□□□□□ -0.6
SNX13-202ENST00000409604 CD300LGQ6UXG3 332 aa11.28□□□□□ -0.6
SNX13-202ENST00000409604 MBOAT1Q6ZNC8 495 aa11.28□□□□□ -0.6
SNX13-202ENST00000409604 HEATR4Q86WZ0 1026 aa11.28□□□□□ -0.6
SNX13-202ENST00000409604 SNX32Q86XE0 403 aa11.28□□□□□ -0.6
SNX13-202ENST00000409604 PIWIL2Q8TC59 973 aaKnown RBP11.28□□□□□ -0.6
SNX13-202ENST00000409604 WFIKKN2Q8TEU8 576 aa11.28□□□□□ -0.6
SNX13-202ENST00000409604 SDCCAG3Q96C92 435 aa11.28□□□□□ -0.6
SNX13-202ENST00000409604 SERPINI1Q99574 410 aa11.28□□□□□ -0.6
SNX13-202ENST00000409604 GATA5Q9BWX5 397 aaPredicted RBP11.28□□□□□ -0.6
SNX13-202ENST00000409604 KDM4CQ9H3R0 1056 aa11.28□□□□□ -0.6
SNX13-202ENST00000409604 EIF3LQ9Y262 564 aaKnown RBP11.28□□□□□ -0.6
SNX13-202ENST00000409604 PGLSO95336 258 aa11.28□□□□□ -0.6
SNX13-202ENST00000409604 HOXB8P17481 243 aaPredicted RBP11.28□□□□□ -0.6
SNX13-202ENST00000409604 CASP9P55211 416 aa11.28□□□□□ -0.6
SNX13-202ENST00000409604 ARF5P84085 180 aa11.28□□□□□ -0.6
SNX13-202ENST00000409604 RPL6Q02878 288 aaKnown RBP11.28□□□□□ -0.6
SNX13-202ENST00000409604 NFATC2Q13469 925 aa11.28□□□□□ -0.6
SNX13-202ENST00000409604 ATP13A5Q4VNC0 1218 aa11.28□□□□□ -0.6
SNX13-202ENST00000409604 ISLR2Q6UXK2 745 aa11.28□□□□□ -0.6
SNX13-202ENST00000409604 CYP2R1Q6VVX0 501 aa11.28□□□□□ -0.6
SNX13-202ENST00000409604 SLC22A9Q8IVM8 553 aa11.28□□□□□ -0.6
SNX13-202ENST00000409604 FIBINQ8TAL6 211 aa11.28□□□□□ -0.6
SNX13-202ENST00000409604 OSCP1Q8WVF1 389 aa11.28□□□□□ -0.6
SNX13-202ENST00000409604 FGF14Q92915 247 aa11.28□□□□□ -0.6
SNX13-202ENST00000409604 TSACCQ96A04 125 aaPredicted RBP11.28□□□□□ -0.6
SNX13-202ENST00000409604 MYADMQ96S97 322 aa11.28□□□□□ -0.6
SNX13-202ENST00000409604 NPIPB15A6NHN6 443 aaPredicted RBP11.28□□□□□ -0.6
SNX13-202ENST00000409604 TRPC5OSA6NMA1 111 aa11.28□□□□□ -0.6
SNX13-202ENST00000409604 SLC7A4O43246 635 aa11.28□□□□□ -0.6
SNX13-202ENST00000409604 ABHD2P08910 425 aa11.28□□□□□ -0.6
SNX13-202ENST00000409604 POLD2P49005 469 aa11.28□□□□□ -0.6
SNX13-202ENST00000409604 MEF2AQ02078 507 aaPredicted RBP11.28□□□□□ -0.6
SNX13-202ENST00000409604 DLX2Q07687 328 aaPredicted RBP11.28□□□□□ -0.6
SNX13-202ENST00000409604 NFYCQ13952 458 aa11.28□□□□□ -0.6
SNX13-202ENST00000409604 RFTN1Q14699 578 aaPredicted RBP11.28□□□□□ -0.6
SNX13-202ENST00000409604 PDE12Q6L8Q7 609 aaKnown RBP11.28□□□□□ -0.6
SNX13-202ENST00000409604 TRAF7Q6Q0C0 670 aa11.28□□□□□ -0.6
SNX13-202ENST00000409604 ADGRD1Q6QNK2 874 aa11.28□□□□□ -0.6
SNX13-202ENST00000409604 KYAT3Q6YP21 454 aaKnown RBP11.28□□□□□ -0.6
SNX13-202ENST00000409604 AMZ2Q86W34 360 aa11.28□□□□□ -0.6
SNX13-202ENST00000409604 CKAP2Q8WWK9 683 aa11.28□□□□□ -0.6
SNX13-202ENST00000409604 LMLNQ96KR4 655 aa11.28□□□□□ -0.6
SNX13-202ENST00000409604 MRPL57Q9BQC6 102 aaKnown RBP11.28□□□□□ -0.6
SNX13-202ENST00000409604 TDRD1Q9BXT4 1180 aaKnown RBP11.28□□□□□ -0.6
SNX13-202ENST00000409604 IPPKQ9H8X2 491 aa11.28□□□□□ -0.6
SNX13-202ENST00000409604 COMMD8Q9NX08 183 aa11.28□□□□□ -0.6
SNX13-202ENST00000409604 THEGQ9P2T0 379 aa11.28□□□□□ -0.6
SNX13-202ENST00000409604 GIMAP2Q9UG22 337 aa11.28□□□□□ -0.6
SNX13-202ENST00000409604 PPM1HQ9ULR3 514 aa11.28□□□□□ -0.6
SNX13-202ENST00000409604 PLLPQ9Y342 182 aa11.28□□□□□ -0.6
SNX13-202ENST00000409604 KCNE2Q9Y6J6 123 aa11.28□□□□□ -0.6
SNX13-202ENST00000409604 SBF1O95248 1867 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms