RNA–Protein interactions for RNA: ENST00000409441.5

LIMS1-204, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS1, Length 1,627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-204ENST00000409441 COQ10AQ96MF6 247 aa13.31□□□□□ -0.28
LIMS1-204ENST00000409441 RANBP9Q96S59 729 aa13.31□□□□□ -0.28
LIMS1-204ENST00000409441 C1QTNF2Q9BXJ5 285 aa13.31□□□□□ -0.28
LIMS1-204ENST00000409441 WWP1Q9H0M0 922 aa13.31□□□□□ -0.28
LIMS1-204ENST00000409441 FAM96AQ9H5X1 160 aa13.31□□□□□ -0.28
LIMS1-204ENST00000409441 BPIFA1Q9NP55 256 aa13.31□□□□□ -0.28
LIMS1-204ENST00000409441 IL17CQ9P0M4 197 aa13.31□□□□□ -0.28
LIMS1-204ENST00000409441 MID2Q9UJV3 735 aa13.31□□□□□ -0.28
LIMS1-204ENST00000409441 ANKRD6Q9Y2G4 727 aa13.31□□□□□ -0.28
LIMS1-204ENST00000409441 COQ6Q9Y2Z9 468 aa13.31□□□□□ -0.28
LIMS1-204ENST00000409441 NUMA1Q14980 2115 aa13.31□□□□□ -0.28
LIMS1-204ENST00000409441 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.31□□□□□ -0.28
LIMS1-204ENST00000409441 MROH6A6NGR9 719 aa13.31□□□□□ -0.28
LIMS1-204ENST00000409441 METTL12A8MUP2 240 aa13.31□□□□□ -0.28
LIMS1-204ENST00000409441 C10orf142B7Z368 130 aa13.31□□□□□ -0.28
LIMS1-204ENST00000409441 WNT9AO14904 365 aa13.31□□□□□ -0.28
LIMS1-204ENST00000409441 HGSO14964 777 aaPredicted RBP13.31□□□□□ -0.28
LIMS1-204ENST00000409441 CHUKO15111 745 aa13.31□□□□□ -0.28
LIMS1-204ENST00000409441 STX7O15400 261 aaKnown RBP13.31□□□□□ -0.28
LIMS1-204ENST00000409441 RECQL5O94762 991 aaPredicted RBP13.31□□□□□ -0.28
LIMS1-204ENST00000409441 ATP6V1G2O95670 118 aa13.31□□□□□ -0.28
LIMS1-204ENST00000409441 SERPINE1P05121 402 aa13.31□□□□□ -0.28
LIMS1-204ENST00000409441 IGHV4-34P06331 123 aa13.31□□□□□ -0.28
LIMS1-204ENST00000409441 C1SP09871 688 aa13.31□□□□□ -0.28
LIMS1-204ENST00000409441 MYL2P10916 166 aa13.31□□□□□ -0.28
LIMS1-204ENST00000409441 GM2AP17900 193 aa13.31□□□□□ -0.28
LIMS1-204ENST00000409441 PAMP19021 973 aa13.31□□□□□ -0.28
LIMS1-204ENST00000409441 CNR2P34972 360 aa13.31□□□□□ -0.28
LIMS1-204ENST00000409441 ETV3P41162 512 aa13.31□□□□□ -0.28
LIMS1-204ENST00000409441 SPINT3P49223 89 aa13.31□□□□□ -0.28
LIMS1-204ENST00000409441 CCR5P51681 352 aa13.31□□□□□ -0.28
LIMS1-204ENST00000409441 CREB5Q02930 508 aa13.31□□□□□ -0.28
LIMS1-204ENST00000409441 TECPR1Q7Z6L1 1165 aa13.31□□□□□ -0.28
LIMS1-204ENST00000409441 TMEFF1Q8IYR6 380 aa13.31□□□□□ -0.28
LIMS1-204ENST00000409441 OR4K2Q8NGD2 314 aa13.31□□□□□ -0.28
LIMS1-204ENST00000409441 BIRC7Q96CA5 298 aa13.31□□□□□ -0.28
LIMS1-204ENST00000409441 GPR22Q99680 433 aa13.31□□□□□ -0.28
LIMS1-204ENST00000409441 PCED1AQ9H1Q7 454 aa13.31□□□□□ -0.28
LIMS1-204ENST00000409441 RHOJQ9H4E5 214 aa13.31□□□□□ -0.28
LIMS1-204ENST00000409441 STN1Q9H668 368 aaKnown RBP13.31□□□□□ -0.28
LIMS1-204ENST00000409441 IARS2Q9NSE4 1012 aaKnown RBP13.31□□□□□ -0.28
LIMS1-204ENST00000409441 PKP3Q9Y446 797 aa13.31□□□□□ -0.28
LIMS1-204ENST00000409441 TCAF1Q9Y4C2 921 aa13.31□□□□□ -0.28
LIMS1-204ENST00000409441 PCDHGA2Q9Y5H1 932 aa13.31□□□□□ -0.28
LIMS1-204ENST00000409441 CCDC78A2IDD5 438 aa13.3□□□□□ -0.28
LIMS1-204ENST00000409441 RGSL1A5PLK6 1076 aa13.3□□□□□ -0.28
LIMS1-204ENST00000409441 SLC31A1O15431 190 aa13.3□□□□□ -0.28
LIMS1-204ENST00000409441 LATO43561 262 aa13.3□□□□□ -0.28
LIMS1-204ENST00000409441 H2AFYO75367 372 aaKnown RBP13.3□□□□□ -0.28
LIMS1-204ENST00000409441 APOA4P06727 396 aa13.3□□□□□ -0.28
LIMS1-204ENST00000409441 KRT16P08779 473 aa13.3□□□□□ -0.28
LIMS1-204ENST00000409441 T-ENOLP0DO92 83 aa13.3□□□□□ -0.28
LIMS1-204ENST00000409441 FGF3P11487 239 aaPredicted RBP13.3□□□□□ -0.28
LIMS1-204ENST00000409441 FGL2Q14314 439 aa13.3□□□□□ -0.28
LIMS1-204ENST00000409441 PCLAFQ15004 111 aa13.3□□□□□ -0.28
LIMS1-204ENST00000409441 C16orf46Q6P387 395 aa13.3□□□□□ -0.28
LIMS1-204ENST00000409441 CLEC14AQ86T13 490 aa13.3□□□□□ -0.28
LIMS1-204ENST00000409441 C11orf74Q86VG3 221 aa13.3□□□□□ -0.28
LIMS1-204ENST00000409441 RAVER1Q8IY67 606 aaKnown RBP13.3□□□□□ -0.28
LIMS1-204ENST00000409441 SREK1Q8WXA9 508 aaKnown RBP13.3□□□□□ -0.28
LIMS1-204ENST00000409441 ASB12Q8WXK4 309 aa13.3□□□□□ -0.28
LIMS1-204ENST00000409441 VPS39Q96JC1 886 aa13.3□□□□□ -0.28
LIMS1-204ENST00000409441 ZNF778Q96MU6 729 aa13.3□□□□□ -0.28
LIMS1-204ENST00000409441 AGAP2Q99490 1192 aa13.3□□□□□ -0.28
LIMS1-204ENST00000409441 DUSP15Q9H1R2 295 aaPredicted RBP13.3□□□□□ -0.28
LIMS1-204ENST00000409441 PKD2L2Q9NZM6 624 aa13.3□□□□□ -0.28
LIMS1-204ENST00000409441 IL1RAPL1Q9NZN1 696 aa13.3□□□□□ -0.28
LIMS1-204ENST00000409441 COPG2Q9UBF2 871 aa13.3□□□□□ -0.28
LIMS1-204ENST00000409441 HAO1Q9UJM8 370 aa13.3□□□□□ -0.28
LIMS1-204ENST00000409441 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.3□□□□□ -0.28
LIMS1-204ENST00000409441 WFS1O76024 890 aa13.29□□□□□ -0.28
LIMS1-204ENST00000409441 TOP3BO95985 862 aaKnown RBP13.29□□□□□ -0.28
LIMS1-204ENST00000409441 BPIP17213 487 aa13.29□□□□□ -0.28
LIMS1-204ENST00000409441 PTPN4P29074 926 aa13.29□□□□□ -0.28
LIMS1-204ENST00000409441 CSRP3P50461 194 aa13.29□□□□□ -0.28
LIMS1-204ENST00000409441 ZNF140P52738 457 aaPredicted RBP13.29□□□□□ -0.28
LIMS1-204ENST00000409441 AGERQ15109 404 aa13.29□□□□□ -0.28
LIMS1-204ENST00000409441 TSTD2Q5T7W7 516 aa13.29□□□□□ -0.28
LIMS1-204ENST00000409441 CES4AQ5XG92 561 aa13.29□□□□□ -0.28
LIMS1-204ENST00000409441 KIAA0930Q6ICG6 404 aaPredicted RBP13.29□□□□□ -0.28
LIMS1-204ENST00000409441 CEP68Q76N32 757 aa13.29□□□□□ -0.28
LIMS1-204ENST00000409441 LPCAT2Q7L5N7 544 aa13.29□□□□□ -0.28
LIMS1-204ENST00000409441 CYP2U1Q7Z449 544 aa13.29□□□□□ -0.28
LIMS1-204ENST00000409441 SLC41A1Q8IVJ1 513 aa13.29□□□□□ -0.28
LIMS1-204ENST00000409441 WDR75Q8IWA0 830 aaKnown RBP13.29□□□□□ -0.28
LIMS1-204ENST00000409441 NRSN1Q8IZ57 195 aa13.29□□□□□ -0.28
LIMS1-204ENST00000409441 OR13C4Q8NGS5 318 aa13.29□□□□□ -0.28
LIMS1-204ENST00000409441 GABPB2Q8TAK5 448 aaPredicted RBP13.29□□□□□ -0.28
LIMS1-204ENST00000409441 STYXQ8WUJ0 223 aa13.29□□□□□ -0.28
LIMS1-204ENST00000409441 FOXJ1Q92949 421 aa13.29□□□□□ -0.28
LIMS1-204ENST00000409441 SLC7A6OSQ96CW6 309 aaPredicted RBP13.29□□□□□ -0.28
LIMS1-204ENST00000409441 FAM83DQ9H4H8 585 aa13.29□□□□□ -0.28
LIMS1-204ENST00000409441 EBF2Q9HAK2 575 aa13.29□□□□□ -0.28
LIMS1-204ENST00000409441 NLE1Q9NVX2 485 aaPredicted RBP13.29□□□□□ -0.28
LIMS1-204ENST00000409441 TMEM216Q9P0N5 145 aa13.29□□□□□ -0.28
LIMS1-204ENST00000409441 SLC2A6Q9UGQ3 507 aa13.29□□□□□ -0.28
LIMS1-204ENST00000409441 CD84Q9UIB8 345 aa13.29□□□□□ -0.28
LIMS1-204ENST00000409441 KMT2EQ8IZD2 1858 aa13.29□□□□□ -0.28
LIMS1-204ENST00000409441 A0A096LPK6 155 aa13.28□□□□□ -0.28
LIMS1-204ENST00000409441 CCDC22O60826 627 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms