RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 PARVAQ9NVD7 372 aa16.39■□□□□ 0.21
CHMP3-203ENST00000409225 ASF1BQ9NVP2 202 aa16.39■□□□□ 0.21
CHMP3-203ENST00000409225 PKD2L2Q9NZM6 624 aa16.39■□□□□ 0.21
CHMP3-203ENST00000409225 ADGRG1Q9Y653 693 aa16.39■□□□□ 0.21
CHMP3-203ENST00000409225 FBN2P35556 2912 aa16.39■□□□□ 0.21
CHMP3-203ENST00000409225 C2CD3Q4AC94 2353 aa16.38■□□□□ 0.21
CHMP3-203ENST00000409225 C1orf232A0A0U1RR37 186 aa16.38■□□□□ 0.21
CHMP3-203ENST00000409225 OR52A4PA6NMU1 304 aa16.38■□□□□ 0.21
CHMP3-203ENST00000409225 TMCO5BA8MYB1 307 aa16.38■□□□□ 0.21
CHMP3-203ENST00000409225 TMEM63AO94886 807 aa16.38■□□□□ 0.21
CHMP3-203ENST00000409225 RPL10P27635 214 aaKnown RBP16.38■□□□□ 0.21
CHMP3-203ENST00000409225 ARL4AP40617 200 aa16.38■□□□□ 0.21
CHMP3-203ENST00000409225 DSC2Q02487 901 aa16.38■□□□□ 0.21
CHMP3-203ENST00000409225 RAPSNQ13702 412 aa16.38■□□□□ 0.21
CHMP3-203ENST00000409225 IHHQ14623 411 aa16.38■□□□□ 0.21
CHMP3-203ENST00000409225 ZRANB3Q5FWF4 1079 aa16.38■□□□□ 0.21
CHMP3-203ENST00000409225 FKBP15Q5T1M5 1219 aa16.38■□□□□ 0.21
CHMP3-203ENST00000409225 CERS6Q6ZMG9 384 aa16.38■□□□□ 0.21
CHMP3-203ENST00000409225 HPS6Q86YV9 775 aa16.38■□□□□ 0.21
CHMP3-203ENST00000409225 CISD2Q8N5K1 135 aaKnown RBP16.38■□□□□ 0.21
CHMP3-203ENST00000409225 CXorf40BQ96DE9 158 aa16.38■□□□□ 0.21
CHMP3-203ENST00000409225 SLC41A2Q96JW4 573 aa16.38■□□□□ 0.21
CHMP3-203ENST00000409225 FCRL4Q96PJ5 515 aa16.38■□□□□ 0.21
CHMP3-203ENST00000409225 POLR1EQ9GZS1 481 aaKnown RBP16.38■□□□□ 0.21
CHMP3-203ENST00000409225 SLC40A1Q9NP59 571 aa16.38■□□□□ 0.21
CHMP3-203ENST00000409225 TRIM10Q9UDY6 481 aa16.38■□□□□ 0.21
CHMP3-203ENST00000409225 EPHA6Q9UF33 1036 aa16.38■□□□□ 0.21
CHMP3-203ENST00000409225 TTLL3Q9Y4R7 772 aa16.38■□□□□ 0.21
CHMP3-203ENST00000409225 SSU72P8A0A1W2PR75 194 aa16.37■□□□□ 0.21
CHMP3-203ENST00000409225 ANKUB1A6NFN9 424 aa16.37■□□□□ 0.21
CHMP3-203ENST00000409225 TMEM191CA6NGB0 347 aa16.37■□□□□ 0.21
CHMP3-203ENST00000409225 CPNE3O75131 537 aaKnown RBP16.37■□□□□ 0.21
CHMP3-203ENST00000409225 PRLP01236 227 aa16.37■□□□□ 0.21
CHMP3-203ENST00000409225 BRAFP15056 766 aa16.37■□□□□ 0.21
CHMP3-203ENST00000409225 ZNF7P17097 686 aaPredicted RBP16.37■□□□□ 0.21
CHMP3-203ENST00000409225 ARL4DP49703 201 aa16.37■□□□□ 0.21
CHMP3-203ENST00000409225 DRG2P55039 364 aaKnown RBP16.37■□□□□ 0.21
CHMP3-203ENST00000409225 ACY1Q03154 408 aa16.37■□□□□ 0.21
CHMP3-203ENST00000409225 KRT31Q15323 416 aa16.37■□□□□ 0.21
CHMP3-203ENST00000409225 SMTNL2Q2TAL5 461 aa16.37■□□□□ 0.21
CHMP3-203ENST00000409225 ZNF569Q5MCW4 686 aa16.37■□□□□ 0.21
CHMP3-203ENST00000409225 FAM69BQ5VUD6 431 aa16.37■□□□□ 0.21
CHMP3-203ENST00000409225 PLEKHA7Q6IQ23 1121 aa16.37■□□□□ 0.21
CHMP3-203ENST00000409225 POLNQ7Z5Q5 900 aa16.37■□□□□ 0.21
CHMP3-203ENST00000409225 RAVER1Q8IY67 606 aaKnown RBP16.37■□□□□ 0.21
CHMP3-203ENST00000409225 IQCKQ8N0W5 287 aa16.37■□□□□ 0.21
CHMP3-203ENST00000409225 TEX26Q8N6G2 289 aa16.37■□□□□ 0.21
CHMP3-203ENST00000409225 NEK11Q8NG66 645 aa16.37■□□□□ 0.21
CHMP3-203ENST00000409225 ADAMTS17Q8TE56 1095 aa16.37■□□□□ 0.21
CHMP3-203ENST00000409225 UBXN4Q92575 508 aa16.37■□□□□ 0.21
CHMP3-203ENST00000409225 HSPH1Q92598 858 aa16.37■□□□□ 0.21
CHMP3-203ENST00000409225 MOCOSQ96EN8 888 aa16.37■□□□□ 0.21
CHMP3-203ENST00000409225 ZNF514Q96K75 400 aaPredicted RBP16.37■□□□□ 0.21
CHMP3-203ENST00000409225 CSPG4P5Q96PW8 444 aa16.37■□□□□ 0.21
CHMP3-203ENST00000409225 MLPHQ9BV36 600 aaPredicted RBP16.37■□□□□ 0.21
CHMP3-203ENST00000409225 SPATA16Q9BXB7 569 aa16.37■□□□□ 0.21
CHMP3-203ENST00000409225 TDRD1Q9BXT4 1180 aaKnown RBP16.37■□□□□ 0.21
CHMP3-203ENST00000409225 WASH6PQ9NQA3 447 aa16.37■□□□□ 0.21
CHMP3-203ENST00000409225 FGF21Q9NSA1 209 aa16.37■□□□□ 0.21
CHMP3-203ENST00000409225 GPR83Q9NYM4 423 aa16.37■□□□□ 0.21
CHMP3-203ENST00000409225 DTLQ9NZJ0 730 aa16.37■□□□□ 0.21
CHMP3-203ENST00000409225 SNX7Q9UNH6 387 aa16.37■□□□□ 0.21
CHMP3-203ENST00000409225 ARHGAP10A1A4S6 786 aa16.36■□□□□ 0.21
CHMP3-203ENST00000409225 SCRG1O75711 98 aa16.36■□□□□ 0.21
CHMP3-203ENST00000409225 SLC25A14O95258 325 aaPredicted RBP16.36■□□□□ 0.21
CHMP3-203ENST00000409225 TPM2P07951 284 aa16.36■□□□□ 0.21
CHMP3-203ENST00000409225 PRF1P14222 555 aa16.36■□□□□ 0.21
CHMP3-203ENST00000409225 IL4RP24394 825 aa16.36■□□□□ 0.21
CHMP3-203ENST00000409225 ITGA1P56199 1179 aa16.36■□□□□ 0.21
CHMP3-203ENST00000409225 CDK18Q07002 472 aa16.36■□□□□ 0.21
CHMP3-203ENST00000409225 GPS2Q13227 327 aa16.36■□□□□ 0.21
CHMP3-203ENST00000409225 ELOAQ14241 798 aaKnown RBP16.36■□□□□ 0.21
CHMP3-203ENST00000409225 NAA30Q147X3 362 aaPredicted RBP16.36■□□□□ 0.21
CHMP3-203ENST00000409225 DPYSL2Q16555 572 aa16.36■□□□□ 0.21
CHMP3-203ENST00000409225 PLEKHN1Q494U1 663 aaPredicted RBP16.36■□□□□ 0.21
CHMP3-203ENST00000409225 ANKRD20A8PQ5CZ79 823 aa16.36■□□□□ 0.21
CHMP3-203ENST00000409225 ALS2CLQ60I27 953 aa16.36■□□□□ 0.21
CHMP3-203ENST00000409225 ADGRG6Q86SQ4 1221 aa16.36■□□□□ 0.21
CHMP3-203ENST00000409225 LRRTM4Q86VH4 590 aa16.36■□□□□ 0.21
CHMP3-203ENST00000409225 TMEM126BQ8IUX1 230 aa16.36■□□□□ 0.21
CHMP3-203ENST00000409225 RBM12BQ8IXT5 1001 aaKnown RBP16.36■□□□□ 0.21
CHMP3-203ENST00000409225 SLC34A3Q8N130 599 aa16.36■□□□□ 0.21
CHMP3-203ENST00000409225 TTC30BQ8N4P2 665 aa16.36■□□□□ 0.21
CHMP3-203ENST00000409225 ENDOVQ8N8Q3 282 aaKnown RBP16.36■□□□□ 0.21
CHMP3-203ENST00000409225 CCHCR1Q8TD31 782 aa16.36■□□□□ 0.21
CHMP3-203ENST00000409225 MARVELD3Q96A59 401 aa16.36■□□□□ 0.21
CHMP3-203ENST00000409225 RANBP9Q96S59 729 aa16.36■□□□□ 0.21
CHMP3-203ENST00000409225 LYSMD1Q96S90 227 aa16.36■□□□□ 0.21
CHMP3-203ENST00000409225 RAB33BQ9H082 229 aa16.36■□□□□ 0.21
CHMP3-203ENST00000409225 CHST8Q9H2A9 424 aa16.36■□□□□ 0.21
CHMP3-203ENST00000409225 PCDH9Q9HC56 1237 aa16.36■□□□□ 0.21
CHMP3-203ENST00000409225 TRIM39Q9HCM9 518 aa16.36■□□□□ 0.21
CHMP3-203ENST00000409225 SEMA5BQ9P283 1151 aa16.36■□□□□ 0.21
CHMP3-203ENST00000409225 KMOO15229 486 aa16.35■□□□□ 0.21
CHMP3-203ENST00000409225 CA4P22748 312 aa16.35■□□□□ 0.21
CHMP3-203ENST00000409225 IL1R2P27930 398 aa16.35■□□□□ 0.21
CHMP3-203ENST00000409225 SERPINB6P35237 376 aa16.35■□□□□ 0.21
CHMP3-203ENST00000409225 IZUMO3Q5VZ72 239 aa16.35■□□□□ 0.21
CHMP3-203ENST00000409225 LCN10Q6JVE6 187 aa16.35■□□□□ 0.21
CHMP3-203ENST00000409225 ABRAXAS1Q6UWZ7 409 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms