RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 CLDN19Q8N6F1 224 aa18.76■□□□□ 0.59
USP39-202ENST00000409025 MEAF6Q9HAF1 191 aa18.76■□□□□ 0.59
USP39-202ENST00000409025 TNFRSF12AQ9NP84 129 aa18.76■□□□□ 0.59
USP39-202ENST00000409025 UPK3BL1B0FP48 263 aa18.75■□□□□ 0.59
USP39-202ENST00000409025 UPK3BL2E5RIL1 263 aa18.75■□□□□ 0.59
USP39-202ENST00000409025 SNX2O60749 519 aa18.75■□□□□ 0.59
USP39-202ENST00000409025 TRIM16O95361 564 aa18.75■□□□□ 0.59
USP39-202ENST00000409025 ITGB6P18564 788 aa18.75■□□□□ 0.59
USP39-202ENST00000409025 NSG1P42857 185 aa18.75■□□□□ 0.59
USP39-202ENST00000409025 NAA25Q14CX7 972 aa18.75■□□□□ 0.59
USP39-202ENST00000409025 ZNF805Q5CZA5 627 aa18.75■□□□□ 0.59
USP39-202ENST00000409025 ANKS6Q68DC2 871 aa18.75■□□□□ 0.59
USP39-202ENST00000409025 CPSF7Q8N684 471 aaKnown RBP18.75■□□□□ 0.59
USP39-202ENST00000409025 POU5F2Q8N7G0 328 aa18.75■□□□□ 0.59
USP39-202ENST00000409025 CEP70Q8NHQ1 597 aa18.75■□□□□ 0.59
USP39-202ENST00000409025 HCAR2Q8TDS4 363 aa18.75■□□□□ 0.59
USP39-202ENST00000409025 MMADHCQ9H3L0 296 aaPredicted RBP18.75■□□□□ 0.59
USP39-202ENST00000409025 MTG2Q9H4K7 406 aa18.75■□□□□ 0.59
USP39-202ENST00000409025 DEC1Q9P2X7 70 aa18.75■□□□□ 0.59
USP39-202ENST00000409025 LRRC14BA6NHZ5 514 aa18.74■□□□□ 0.59
USP39-202ENST00000409025 SLC22A2O15244 555 aa18.74■□□□□ 0.59
USP39-202ENST00000409025 CTSLP07711 333 aa18.74■□□□□ 0.59
USP39-202ENST00000409025 XPAP23025 273 aaPredicted RBP18.74■□□□□ 0.59
USP39-202ENST00000409025 DGKAP23743 735 aa18.74■□□□□ 0.59
USP39-202ENST00000409025 PDGFRLQ15198 375 aa18.74■□□□□ 0.59
USP39-202ENST00000409025 ATP13A5Q4VNC0 1218 aa18.74■□□□□ 0.59
USP39-202ENST00000409025 RFLNAQ6ZTI6 216 aa18.74■□□□□ 0.59
USP39-202ENST00000409025 CLYBLQ8N0X4 340 aa18.74■□□□□ 0.59
USP39-202ENST00000409025 COPS8Q99627 209 aa18.74■□□□□ 0.59
USP39-202ENST00000409025 SLC28A3Q9HAS3 691 aa18.74■□□□□ 0.59
USP39-202ENST00000409025 TRPV4Q9HBA0 871 aa18.74■□□□□ 0.59
USP39-202ENST00000409025 MID1IP1Q9NPA3 183 aa18.74■□□□□ 0.59
USP39-202ENST00000409025 CD274Q9NZQ7 290 aa18.74■□□□□ 0.59
USP39-202ENST00000409025 DKK3Q9UBP4 350 aa18.74■□□□□ 0.59
USP39-202ENST00000409025 EPOPA6NHQ4 379 aa18.74■□□□□ 0.59
USP39-202ENST00000409025 NCF1BA6NI72 391 aaPredicted RBP18.74■□□□□ 0.59
USP39-202ENST00000409025 NCF1CA8MVU1 366 aaPredicted RBP18.74■□□□□ 0.59
USP39-202ENST00000409025 WFS1O76024 890 aa18.74■□□□□ 0.59
USP39-202ENST00000409025 CDK14O94921 469 aa18.74■□□□□ 0.59
USP39-202ENST00000409025 NCF1P14598 390 aaPredicted RBP18.74■□□□□ 0.59
USP39-202ENST00000409025 TIMP2P16035 220 aa18.74■□□□□ 0.59
USP39-202ENST00000409025 ADSLP30566 484 aaPredicted RBP18.74■□□□□ 0.59
USP39-202ENST00000409025 PGM1P36871 562 aa18.74■□□□□ 0.59
USP39-202ENST00000409025 SLC6A11P48066 632 aa18.74■□□□□ 0.59
USP39-202ENST00000409025 INHBCP55103 352 aa18.74■□□□□ 0.59
USP39-202ENST00000409025 CLCQ05315 142 aa18.74■□□□□ 0.59
USP39-202ENST00000409025 FRA10AC1Q70Z53 315 aa18.74■□□□□ 0.59
USP39-202ENST00000409025 ADAMTSL2Q86TH1 951 aa18.74■□□□□ 0.59
USP39-202ENST00000409025 MYO1HQ8N1T3 1032 aa18.74■□□□□ 0.59
USP39-202ENST00000409025 ZBTB2Q8N680 514 aa18.74■□□□□ 0.59
USP39-202ENST00000409025 FBXO27Q8NI29 283 aa18.74■□□□□ 0.59
USP39-202ENST00000409025 LKAAEAR1Q8TD35 194 aa18.74■□□□□ 0.59
USP39-202ENST00000409025 ACTRT2Q8TDY3 377 aa18.74■□□□□ 0.59
USP39-202ENST00000409025 NAT14Q8WUY8 206 aa18.74■□□□□ 0.59
USP39-202ENST00000409025 FAM83CQ9BQN1 747 aa18.74■□□□□ 0.59
USP39-202ENST00000409025 C1QTNF3Q9BXJ4 246 aa18.74■□□□□ 0.59
USP39-202ENST00000409025 PCDH12Q9NPG4 1184 aa18.74■□□□□ 0.59
USP39-202ENST00000409025 NUDT4Q9NZJ9 180 aa18.74■□□□□ 0.59
USP39-202ENST00000409025 G3BP2Q9UN86 482 aaKnown RBP18.74■□□□□ 0.59
USP39-202ENST00000409025 FGF4P08620 206 aa18.73■□□□□ 0.59
USP39-202ENST00000409025 RPS17P08708 135 aaKnown RBP18.73■□□□□ 0.59
USP39-202ENST00000409025 COX4I1P13073 169 aa18.73■□□□□ 0.59
USP39-202ENST00000409025 EZRP15311 586 aaKnown RBP18.73■□□□□ 0.59
USP39-202ENST00000409025 SH3BP2P78314 561 aa18.73■□□□□ 0.59
USP39-202ENST00000409025 WASHC2DQ5SRD0 308 aa18.73■□□□□ 0.59
USP39-202ENST00000409025 CLEC6AQ6EIG7 209 aa18.73■□□□□ 0.59
USP39-202ENST00000409025 ZNF366Q8N895 744 aa18.73■□□□□ 0.59
USP39-202ENST00000409025 TRPC4APQ8TEL6 797 aa18.73■□□□□ 0.59
USP39-202ENST00000409025 NXPE3Q969Y0 559 aa18.73■□□□□ 0.59
USP39-202ENST00000409025 NSUN5Q96P11 429 aaKnown RBP18.73■□□□□ 0.59
USP39-202ENST00000409025 CATSPER2Q96P56 530 aa18.73■□□□□ 0.59
USP39-202ENST00000409025 PANX3Q96QZ0 392 aa18.73■□□□□ 0.59
USP39-202ENST00000409025 ZNF385DQ9H6B1 395 aa18.73■□□□□ 0.59
USP39-202ENST00000409025 RAD18Q9NS91 495 aa18.73■□□□□ 0.59
USP39-202ENST00000409025 SPATS2LQ9NUQ6 558 aaKnown RBP18.73■□□□□ 0.59
USP39-202ENST00000409025 CHD7Q9P2D1 2997 aa18.73■□□□□ 0.59
USP39-202ENST00000409025 PRRT4C9JH25 899 aa18.72■□□□□ 0.59
USP39-202ENST00000409025 MAGEC1O60732 1142 aa18.72■□□□□ 0.59
USP39-202ENST00000409025 PIK3R1P27986 724 aa18.72■□□□□ 0.59
USP39-202ENST00000409025 HK3P52790 923 aa18.72■□□□□ 0.59
USP39-202ENST00000409025 LCP2Q13094 533 aa18.72■□□□□ 0.59
USP39-202ENST00000409025 TGFBIQ15582 683 aa18.72■□□□□ 0.59
USP39-202ENST00000409025 CRY1Q16526 586 aa18.72■□□□□ 0.59
USP39-202ENST00000409025 GAB4Q2WGN9 574 aa18.72■□□□□ 0.59
USP39-202ENST00000409025 TTLL9Q3SXZ7 439 aa18.72■□□□□ 0.59
USP39-202ENST00000409025 GPRC6AQ5T6X5 926 aa18.72■□□□□ 0.59
USP39-202ENST00000409025 TMEM198Q66K66 360 aa18.72■□□□□ 0.59
USP39-202ENST00000409025 SPATA16Q9BXB7 569 aa18.72■□□□□ 0.59
USP39-202ENST00000409025 ZFP14Q9HCL3 533 aa18.72■□□□□ 0.59
USP39-202ENST00000409025 CD84Q9UIB8 345 aa18.72■□□□□ 0.59
USP39-202ENST00000409025 PLXNB3Q9ULL4 1909 aa18.72■□□□□ 0.59
USP39-202ENST00000409025 LOC100653049A0A140TA62 436 aa18.72■□□□□ 0.59
USP39-202ENST00000409025 OTOL1A6NHN0 477 aaPredicted RBP18.72■□□□□ 0.59
USP39-202ENST00000409025 C16orf96A6NNT2 1141 aa18.72■□□□□ 0.59
USP39-202ENST00000409025 MEI4A8MW99 385 aa18.72■□□□□ 0.59
USP39-202ENST00000409025 AZIN1O14977 448 aa18.72■□□□□ 0.59
USP39-202ENST00000409025 KRT34O76011 436 aa18.72■□□□□ 0.59
USP39-202ENST00000409025 S100BP04271 92 aaPredicted RBP18.72■□□□□ 0.59
USP39-202ENST00000409025 THRAP10827 490 aa18.72■□□□□ 0.59
USP39-202ENST00000409025 EIF4HQ15056 248 aaKnown RBP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms