RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 CBARPQ8N350 705 aaPredicted RBP9.63□□□□□ -0.87
NIF3L1-202ENST00000409020 PLD5Q8N7P1 536 aa9.63□□□□□ -0.87
NIF3L1-202ENST00000409020 PIH1D2Q8WWB5 315 aa9.63□□□□□ -0.87
NIF3L1-202ENST00000409020 MAML1Q92585 1016 aa9.63□□□□□ -0.87
NIF3L1-202ENST00000409020 NXPE2Q96DL1 559 aa9.63□□□□□ -0.87
NIF3L1-202ENST00000409020 NUS1Q96E22 293 aa9.63□□□□□ -0.87
NIF3L1-202ENST00000409020 WDR92Q96MX6 357 aa9.63□□□□□ -0.87
NIF3L1-202ENST00000409020 LGMNQ99538 433 aa9.63□□□□□ -0.87
NIF3L1-202ENST00000409020 CENPOQ9BU64 300 aa9.63□□□□□ -0.87
NIF3L1-202ENST00000409020 CEP41Q9BYV8 373 aa9.63□□□□□ -0.87
NIF3L1-202ENST00000409020 TMEM168Q9H0V1 697 aa9.63□□□□□ -0.87
NIF3L1-202ENST00000409020 GOLPH3Q9H4A6 298 aa9.63□□□□□ -0.87
NIF3L1-202ENST00000409020 HAUS2Q9NVX0 235 aa9.63□□□□□ -0.87
NIF3L1-202ENST00000409020 FKBP14Q9NWM8 211 aa9.63□□□□□ -0.87
NIF3L1-202ENST00000409020 GULP1Q9UBP9 304 aa9.63□□□□□ -0.87
NIF3L1-202ENST00000409020 SALL4Q9UJQ4 1053 aa9.63□□□□□ -0.87
NIF3L1-202ENST00000409020 NOSIPQ9Y314 301 aaKnown RBP9.63□□□□□ -0.87
NIF3L1-202ENST00000409020 ST14Q9Y5Y6 855 aa9.63□□□□□ -0.87
NIF3L1-202ENST00000409020 PIEZO2Q9H5I5 2752 aa9.63□□□□□ -0.87
NIF3L1-202ENST00000409020 RP1P56715 2156 aa9.62□□□□□ -0.87
NIF3L1-202ENST00000409020 KCNK1O00180 336 aa9.62□□□□□ -0.87
NIF3L1-202ENST00000409020 TPP1O14773 563 aa9.62□□□□□ -0.87
NIF3L1-202ENST00000409020 MATN3O15232 486 aa9.62□□□□□ -0.87
NIF3L1-202ENST00000409020 USP12O75317 370 aa9.62□□□□□ -0.87
NIF3L1-202ENST00000409020 SOD1P00441 154 aa9.62□□□□□ -0.87
NIF3L1-202ENST00000409020 GP1BAP07359 652 aa9.62□□□□□ -0.87
NIF3L1-202ENST00000409020 HTR1BP28222 390 aa9.62□□□□□ -0.87
NIF3L1-202ENST00000409020 MAN1A1P33908 653 aa9.62□□□□□ -0.87
NIF3L1-202ENST00000409020 TRIM23P36406 574 aa9.62□□□□□ -0.87
NIF3L1-202ENST00000409020 POLD2P49005 469 aa9.62□□□□□ -0.87
NIF3L1-202ENST00000409020 E2F1Q01094 437 aa9.62□□□□□ -0.87
NIF3L1-202ENST00000409020 MSLNQ13421 630 aaPredicted RBP9.62□□□□□ -0.87
NIF3L1-202ENST00000409020 RTP5Q14D33 572 aa9.62□□□□□ -0.87
NIF3L1-202ENST00000409020 LLGL1Q15334 1064 aa9.62□□□□□ -0.87
NIF3L1-202ENST00000409020 IFI16Q16666 785 aaKnown RBP9.62□□□□□ -0.87
NIF3L1-202ENST00000409020 ALS2CLQ60I27 953 aa9.62□□□□□ -0.87
NIF3L1-202ENST00000409020 PNCKQ6P2M8 343 aa9.62□□□□□ -0.87
NIF3L1-202ENST00000409020 Q6ZVL8 140 aa9.62□□□□□ -0.87
NIF3L1-202ENST00000409020 GRAMD2AQ8IUY3 354 aa9.62□□□□□ -0.87
NIF3L1-202ENST00000409020 OR56A4Q8NGH8 313 aa9.62□□□□□ -0.87
NIF3L1-202ENST00000409020 ARRDC2Q8TBH0 407 aa9.62□□□□□ -0.87
NIF3L1-202ENST00000409020 ZNF473Q8WTR7 871 aaKnown RBP9.62□□□□□ -0.87
NIF3L1-202ENST00000409020 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.62□□□□□ -0.87
NIF3L1-202ENST00000409020 GFM2Q969S9 779 aaKnown RBP9.62□□□□□ -0.87
NIF3L1-202ENST00000409020 ITPKCQ96DU7 683 aa9.62□□□□□ -0.87
NIF3L1-202ENST00000409020 DTD2Q96FN9 168 aa9.62□□□□□ -0.87
NIF3L1-202ENST00000409020 ATXN7L3BQ96GX2 97 aa9.62□□□□□ -0.87
NIF3L1-202ENST00000409020 CCDC42Q96M95 316 aa9.62□□□□□ -0.87
NIF3L1-202ENST00000409020 MCCC1Q96RQ3 725 aaPredicted RBP9.62□□□□□ -0.87
NIF3L1-202ENST00000409020 RBM15Q96T37 977 aaKnown RBP eCLIP9.62□□□□□ -0.879e-7■■■■□ 19.6
NIF3L1-202ENST00000409020 AGAP2Q99490 1192 aa9.62□□□□□ -0.87
NIF3L1-202ENST00000409020 CCDC3Q9BQI4 270 aa9.62□□□□□ -0.87
NIF3L1-202ENST00000409020 DRC3Q9H069 523 aa9.62□□□□□ -0.87
NIF3L1-202ENST00000409020 WDR26Q9H7D7 661 aa9.62□□□□□ -0.87
NIF3L1-202ENST00000409020 RBM22Q9NW64 420 aaKnown RBP eCLIP9.62□□□□□ -0.87
NIF3L1-202ENST00000409020 ADAMTS20P59510 1910 aa9.62□□□□□ -0.87
NIF3L1-202ENST00000409020 PTPRQQ9UMZ3 2332 aa9.62□□□□□ -0.87
NIF3L1-202ENST00000409020 FASNP49327 2511 aaKnown RBP9.62□□□□□ -0.87
NIF3L1-202ENST00000409020 TENM4Q6N022 2769 aa9.61□□□□□ -0.87
NIF3L1-202ENST00000409020 A0A087WV48 116 aa9.61□□□□□ -0.87
NIF3L1-202ENST00000409020 TOR1BO14657 336 aa9.61□□□□□ -0.87
NIF3L1-202ENST00000409020 RASGRP1O95267 797 aa9.61□□□□□ -0.87
NIF3L1-202ENST00000409020 PRLP01236 227 aa9.61□□□□□ -0.87
NIF3L1-202ENST00000409020 EIF2S1P05198 315 aaKnown RBP9.61□□□□□ -0.87
NIF3L1-202ENST00000409020 ANXA6P08133 673 aa9.61□□□□□ -0.87
NIF3L1-202ENST00000409020 MMP2P08253 660 aa9.61□□□□□ -0.87
NIF3L1-202ENST00000409020 KRT7P08729 469 aa9.61□□□□□ -0.87
NIF3L1-202ENST00000409020 CTSEP14091 401 aa9.61□□□□□ -0.87
NIF3L1-202ENST00000409020 CPA3P15088 417 aa9.61□□□□□ -0.87
NIF3L1-202ENST00000409020 PORP16435 677 aaPredicted RBP9.61□□□□□ -0.87
NIF3L1-202ENST00000409020 HSPA9P38646 679 aaKnown RBP9.61□□□□□ -0.87
NIF3L1-202ENST00000409020 KIAA1024LP59773 190 aa9.61□□□□□ -0.87
NIF3L1-202ENST00000409020 PTSQ03393 145 aa9.61□□□□□ -0.87
NIF3L1-202ENST00000409020 SPCS2Q15005 226 aa9.61□□□□□ -0.87
NIF3L1-202ENST00000409020 PDK2Q15119 407 aa9.61□□□□□ -0.87
NIF3L1-202ENST00000409020 ARMC12Q5T9G4 340 aa9.61□□□□□ -0.87
NIF3L1-202ENST00000409020 LRRC66Q68CR7 880 aa9.61□□□□□ -0.87
NIF3L1-202ENST00000409020 ALG1LQ6GMV1 187 aa9.61□□□□□ -0.87
NIF3L1-202ENST00000409020 HEATR4Q86WZ0 1026 aa9.61□□□□□ -0.87
NIF3L1-202ENST00000409020 NDUFAF2Q8N183 169 aa9.61□□□□□ -0.87
NIF3L1-202ENST00000409020 TC2NQ8N9U0 490 aa9.61□□□□□ -0.87
NIF3L1-202ENST00000409020 SCAMP4Q969E2 229 aa9.61□□□□□ -0.87
NIF3L1-202ENST00000409020 CCDC74AQ96AQ1 378 aa9.61□□□□□ -0.87
NIF3L1-202ENST00000409020 SCRN2Q96FV2 425 aa9.61□□□□□ -0.87
NIF3L1-202ENST00000409020 RNF157Q96PX1 679 aa9.61□□□□□ -0.87
NIF3L1-202ENST00000409020 TDRD1Q9BXT4 1180 aaKnown RBP9.61□□□□□ -0.87
NIF3L1-202ENST00000409020 NRSN2Q9GZP1 204 aa9.61□□□□□ -0.87
NIF3L1-202ENST00000409020 POLR1EQ9GZS1 481 aaKnown RBP9.61□□□□□ -0.87
NIF3L1-202ENST00000409020 ABCG4Q9H172 646 aa9.61□□□□□ -0.87
NIF3L1-202ENST00000409020 SYNDIG1Q9H7V2 258 aa9.61□□□□□ -0.87
NIF3L1-202ENST00000409020 USP29Q9HBJ7 922 aa9.61□□□□□ -0.87
NIF3L1-202ENST00000409020 CYP4F12Q9HCS2 524 aa9.61□□□□□ -0.87
NIF3L1-202ENST00000409020 INIPQ9NRY2 104 aa9.61□□□□□ -0.87
NIF3L1-202ENST00000409020 PHTF1Q9UMS5 762 aa9.61□□□□□ -0.87
NIF3L1-202ENST00000409020 GPR34Q9UPC5 381 aa9.61□□□□□ -0.87
NIF3L1-202ENST00000409020 CHKBQ9Y259 395 aa9.61□□□□□ -0.87
NIF3L1-202ENST00000409020 PLEKHM1Q9Y4G2 1056 aa9.61□□□□□ -0.87
NIF3L1-202ENST00000409020 HEY1Q9Y5J3 304 aa9.61□□□□□ -0.87
NIF3L1-202ENST00000409020 PCYT1BQ9Y5K3 369 aaPredicted RBP9.61□□□□□ -0.87
NIF3L1-202ENST00000409020 DGKBQ9Y6T7 804 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms