RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 APOC1P02654 83 aa12.87□□□□□ -0.35
RNF43-201ENST00000407977 IFNA16P05015 189 aa12.87□□□□□ -0.35
RNF43-201ENST00000407977 UGT2B4P06133 528 aa12.87□□□□□ -0.35
RNF43-201ENST00000407977 EEFSECP57772 596 aaKnown RBP12.87□□□□□ -0.35
RNF43-201ENST00000407977 YBEYP58557 167 aaPredicted RBP12.87□□□□□ -0.35
RNF43-201ENST00000407977 PPP2R2BQ00005 443 aa12.87□□□□□ -0.35
RNF43-201ENST00000407977 FUT2Q10981 343 aa12.87□□□□□ -0.35
RNF43-201ENST00000407977 FASTKD3Q14CZ7 662 aaKnown RBP12.87□□□□□ -0.35
RNF43-201ENST00000407977 DPY19L1Q2PZI1 675 aa12.87□□□□□ -0.35
RNF43-201ENST00000407977 RFWD3Q6PCD5 774 aa12.87□□□□□ -0.35
RNF43-201ENST00000407977 AARSD1Q9BTE6 412 aaKnown RBP12.87□□□□□ -0.35
RNF43-201ENST00000407977 C1orf21Q9H246 121 aa12.87□□□□□ -0.35
RNF43-201ENST00000407977 SPATA31A6Q5VVP1 1343 aa12.86□□□□□ -0.35
RNF43-201ENST00000407977 PRAMEF33A0A0G2JMD5 474 aa12.86□□□□□ -0.35
RNF43-201ENST00000407977 PRAMEF10O60809 474 aa12.86□□□□□ -0.35
RNF43-201ENST00000407977 TBX10O75333 385 aa12.86□□□□□ -0.35
RNF43-201ENST00000407977 IFNA7P01567 189 aa12.86□□□□□ -0.35
RNF43-201ENST00000407977 PTGS2P35354 604 aa12.86□□□□□ -0.35
RNF43-201ENST00000407977 GPALPP1Q8IXQ4 340 aa12.86□□□□□ -0.35
RNF43-201ENST00000407977 SGK2Q9HBY8 427 aa12.86□□□□□ -0.35
RNF43-201ENST00000407977 NDOR1Q9UHB4 597 aa12.86□□□□□ -0.35
RNF43-201ENST00000407977 A8MX80 341 aa12.86□□□□□ -0.35
RNF43-201ENST00000407977 C1QTNF3-AMACRE9PGA6 284 aa12.86□□□□□ -0.35
RNF43-201ENST00000407977 GRIN3BO60391 1043 aa12.86□□□□□ -0.35
RNF43-201ENST00000407977 YES1P07947 543 aa12.86□□□□□ -0.35
RNF43-201ENST00000407977 NR4A1P22736 598 aa12.86□□□□□ -0.35
RNF43-201ENST00000407977 MAXP61244 160 aa12.86□□□□□ -0.35
RNF43-201ENST00000407977 CNTN2Q02246 1040 aa12.86□□□□□ -0.35
RNF43-201ENST00000407977 ADNP2Q6IQ32 1131 aa12.86□□□□□ -0.35
RNF43-201ENST00000407977 FSTL4Q6MZW2 842 aa12.86□□□□□ -0.35
RNF43-201ENST00000407977 DET1Q7L5Y6 550 aa12.86□□□□□ -0.35
RNF43-201ENST00000407977 ADGRG2Q8IZP9 1017 aa12.86□□□□□ -0.35
RNF43-201ENST00000407977 AP2M1Q96CW1 435 aa12.86□□□□□ -0.35
RNF43-201ENST00000407977 FCRL4Q96PJ5 515 aa12.86□□□□□ -0.35
RNF43-201ENST00000407977 MKLN1Q9UL63 735 aa12.86□□□□□ -0.35
RNF43-201ENST00000407977 PRODHO43272 600 aa12.86□□□□□ -0.35
RNF43-201ENST00000407977 TUBA1BP68363 451 aa12.86□□□□□ -0.35
RNF43-201ENST00000407977 PPM1JQ5JR12 505 aa12.86□□□□□ -0.35
RNF43-201ENST00000407977 TUBA1AQ71U36 451 aa12.86□□□□□ -0.35
RNF43-201ENST00000407977 TMC8Q8IU68 726 aa12.86□□□□□ -0.35
RNF43-201ENST00000407977 SMG8Q8ND04 991 aaKnown RBP12.86□□□□□ -0.35
RNF43-201ENST00000407977 SRFBP1Q8NEF9 429 aaKnown RBP12.86□□□□□ -0.35
RNF43-201ENST00000407977 TCF25Q9BQ70 676 aa12.86□□□□□ -0.35
RNF43-201ENST00000407977 RHBGQ9H310 441 aa12.86□□□□□ -0.35
RNF43-201ENST00000407977 CALML5Q9NZT1 146 aa12.86□□□□□ -0.35
RNF43-201ENST00000407977 STOX2Q9P2F5 926 aaPredicted RBP12.86□□□□□ -0.35
RNF43-201ENST00000407977 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.86□□□□□ -0.35
RNF43-201ENST00000407977 SPATA31C2B4DYI2 1134 aa12.86□□□□□ -0.35
RNF43-201ENST00000407977 CXCR6O00574 342 aa12.86□□□□□ -0.35
RNF43-201ENST00000407977 ANXA8P13928 327 aa12.86□□□□□ -0.35
RNF43-201ENST00000407977 ITIH1P19827 911 aa12.86□□□□□ -0.35
RNF43-201ENST00000407977 ALDH4A1P30038 563 aa12.86□□□□□ -0.35
RNF43-201ENST00000407977 NRG1Q02297 640 aaPredicted RBP12.86□□□□□ -0.35
RNF43-201ENST00000407977 ABRQ12979 859 aa12.86□□□□□ -0.35
RNF43-201ENST00000407977 DAG1Q14118 895 aa12.86□□□□□ -0.35
RNF43-201ENST00000407977 LARS2Q15031 903 aaKnown RBP12.86□□□□□ -0.35
RNF43-201ENST00000407977 FBXO43Q4G163 708 aa12.86□□□□□ -0.35
RNF43-201ENST00000407977 IRAK1BP1Q5VVH5 260 aa12.86□□□□□ -0.35
RNF43-201ENST00000407977 RD3Q7Z3Z2 195 aa12.86□□□□□ -0.35
RNF43-201ENST00000407977 ZDHHC21Q8IVQ6 265 aa12.86□□□□□ -0.35
RNF43-201ENST00000407977 SLC30A8Q8IWU4 369 aa12.86□□□□□ -0.35
RNF43-201ENST00000407977 RERGQ96A58 199 aaPredicted RBP12.86□□□□□ -0.35
RNF43-201ENST00000407977 RAD51AP1Q96B01 352 aa12.86□□□□□ -0.35
RNF43-201ENST00000407977 CRELD1Q96HD1 420 aa12.86□□□□□ -0.35
RNF43-201ENST00000407977 CPXM1Q96SM3 734 aa12.86□□□□□ -0.35
RNF43-201ENST00000407977 IPPKQ9H8X2 491 aa12.86□□□□□ -0.35
RNF43-201ENST00000407977 AGO3Q9H9G7 860 aaKnown RBP12.86□□□□□ -0.35
RNF43-201ENST00000407977 FBXO10Q9UK96 956 aa12.86□□□□□ -0.35
RNF43-201ENST00000407977 MRPS33Q9Y291 106 aaKnown RBP12.86□□□□□ -0.35
RNF43-201ENST00000407977 SPEF1Q9Y4P9 236 aa12.86□□□□□ -0.35
RNF43-201ENST00000407977 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.86□□□□□ -0.35
RNF43-201ENST00000407977 RIIAD1A6NNX1 92 aa12.85□□□□□ -0.35
RNF43-201ENST00000407977 M0QX08 132 aa12.85□□□□□ -0.35
RNF43-201ENST00000407977 CILPO75339 1184 aa12.85□□□□□ -0.35
RNF43-201ENST00000407977 CELF2O95319 508 aaKnown RBP12.85□□□□□ -0.35
RNF43-201ENST00000407977 SCNN1GP51170 649 aa12.85□□□□□ -0.35
RNF43-201ENST00000407977 EN1Q05925 392 aaPredicted RBP12.85□□□□□ -0.35
RNF43-201ENST00000407977 SMARCB1Q12824 385 aa12.85□□□□□ -0.35
RNF43-201ENST00000407977 LAPTM5Q13571 262 aa12.85□□□□□ -0.35
RNF43-201ENST00000407977 PLEKHG4Q58EX7 1191 aa12.85□□□□□ -0.35
RNF43-201ENST00000407977 GPR158Q5T848 1215 aa12.85□□□□□ -0.35
RNF43-201ENST00000407977 KLHDC10Q6PID8 442 aa12.85□□□□□ -0.35
RNF43-201ENST00000407977 C17orf64Q86WR6 236 aa12.85□□□□□ -0.35
RNF43-201ENST00000407977 ADAMTS15Q8TE58 950 aa12.85□□□□□ -0.35
RNF43-201ENST00000407977 IRGQQ8WZA9 623 aa12.85□□□□□ -0.35
RNF43-201ENST00000407977 AIF1LQ9BQI0 150 aa12.85□□□□□ -0.35
RNF43-201ENST00000407977 ELL3Q9HB65 397 aaPredicted RBP12.85□□□□□ -0.35
RNF43-201ENST00000407977 SPON1Q9HCB6 807 aa12.85□□□□□ -0.35
RNF43-201ENST00000407977 SALL4Q9UJQ4 1053 aa12.85□□□□□ -0.35
RNF43-201ENST00000407977 ADGRB2O60241 1585 aa12.85□□□□□ -0.35
RNF43-201ENST00000407977 PCP4L1A6NKN8 68 aa12.85□□□□□ -0.35
RNF43-201ENST00000407977 PDLIM1O00151 329 aa12.85□□□□□ -0.35
RNF43-201ENST00000407977 GTPBP1O00178 669 aaKnown RBP12.85□□□□□ -0.35
RNF43-201ENST00000407977 KLF11O14901 512 aa12.85□□□□□ -0.35
RNF43-201ENST00000407977 TBX1O43435 398 aa12.85□□□□□ -0.35
RNF43-201ENST00000407977 CLDN11O75508 207 aa12.85□□□□□ -0.35
RNF43-201ENST00000407977 CREMQ03060 361 aa12.85□□□□□ -0.35
RNF43-201ENST00000407977 SRSF11Q05519 484 aaKnown RBP12.85□□□□□ -0.35
RNF43-201ENST00000407977 NADK2Q4G0N4 442 aa12.85□□□□□ -0.35
RNF43-201ENST00000407977 RAET1GQ6H3X3 334 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms