RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 NANOGP8Q6NSW7 305 aa9.75□□□□□ -0.85
MSH2-202ENST00000406134 SLC24A5Q71RS6 500 aa9.75□□□□□ -0.85
MSH2-202ENST00000406134 DDIASQ8IXT1 998 aa9.75□□□□□ -0.85
MSH2-202ENST00000406134 LGI2Q8N0V4 545 aa9.75□□□□□ -0.85
MSH2-202ENST00000406134 PDPRQ8NCN5 879 aa9.75□□□□□ -0.85
MSH2-202ENST00000406134 HM13Q8TCT9 377 aa9.75□□□□□ -0.85
MSH2-202ENST00000406134 TUBGCP3Q96CW5 907 aa9.75□□□□□ -0.85
MSH2-202ENST00000406134 C1orf50Q9BV19 199 aa9.75□□□□□ -0.85
MSH2-202ENST00000406134 ALG2Q9H553 416 aa9.75□□□□□ -0.85
MSH2-202ENST00000406134 NANOGQ9H9S0 305 aa9.75□□□□□ -0.85
MSH2-202ENST00000406134 HACD3Q9P035 362 aa9.75□□□□□ -0.85
MSH2-202ENST00000406134 EIF2B4Q9UI10 523 aaKnown RBP9.75□□□□□ -0.85
MSH2-202ENST00000406134 FKBPLQ9UIM3 349 aa9.75□□□□□ -0.85
MSH2-202ENST00000406134 MYRFQ9Y2G1 1151 aa9.75□□□□□ -0.85
MSH2-202ENST00000406134 NCF1BA6NI72 391 aaPredicted RBP9.75□□□□□ -0.85
MSH2-202ENST00000406134 NCF1CA8MVU1 366 aaPredicted RBP9.75□□□□□ -0.85
MSH2-202ENST00000406134 HNRNPRO43390 633 aaKnown RBP9.75□□□□□ -0.85
MSH2-202ENST00000406134 KDELR3O43731 214 aa9.75□□□□□ -0.85
MSH2-202ENST00000406134 TRMUO75648 421 aaKnown RBP9.75□□□□□ -0.85
MSH2-202ENST00000406134 NCF1P14598 390 aaPredicted RBP9.75□□□□□ -0.85
MSH2-202ENST00000406134 FLT3LGP49771 235 aa9.75□□□□□ -0.85
MSH2-202ENST00000406134 BNIP2Q12982 314 aa9.75□□□□□ -0.85
MSH2-202ENST00000406134 NKG7Q16617 165 aa9.75□□□□□ -0.85
MSH2-202ENST00000406134 PDCD4Q53EL6 469 aaKnown RBP9.75□□□□□ -0.85
MSH2-202ENST00000406134 SBSNQ6UWP8 590 aa9.75□□□□□ -0.85
MSH2-202ENST00000406134 ZFAND4Q86XD8 727 aa9.75□□□□□ -0.85
MSH2-202ENST00000406134 TRPV3Q8NET8 790 aa9.75□□□□□ -0.85
MSH2-202ENST00000406134 DNAJB14Q8TBM8 379 aa9.75□□□□□ -0.85
MSH2-202ENST00000406134 STAG3L4Q8TBR4 150 aa9.75□□□□□ -0.85
MSH2-202ENST00000406134 TANKQ92844 425 aa9.75□□□□□ -0.85
MSH2-202ENST00000406134 DOK1Q99704 481 aa9.75□□□□□ -0.85
MSH2-202ENST00000406134 ELOVL2Q9NXB9 296 aa9.75□□□□□ -0.85
MSH2-202ENST00000406134 RSL24D1Q9UHA3 163 aaKnown RBP9.75□□□□□ -0.85
MSH2-202ENST00000406134 EVLQ9UI08 416 aaPredicted RBP9.75□□□□□ -0.85
MSH2-202ENST00000406134 RNF112Q9ULX5 631 aa9.75□□□□□ -0.85
MSH2-202ENST00000406134 EI24O14681 340 aa9.74□□□□□ -0.85
MSH2-202ENST00000406134 LSM1O15116 133 aaKnown RBP9.74□□□□□ -0.85
MSH2-202ENST00000406134 INSIG1O15503 277 aa9.74□□□□□ -0.85
MSH2-202ENST00000406134 TLR5O60602 858 aa9.74□□□□□ -0.85
MSH2-202ENST00000406134 SLC10A3P09131 477 aa9.74□□□□□ -0.85
MSH2-202ENST00000406134 ZNF157P51786 506 aaPredicted RBP9.74□□□□□ -0.85
MSH2-202ENST00000406134 CTXN3Q4LDR2 81 aa9.74□□□□□ -0.85
MSH2-202ENST00000406134 PRMT9Q6P2P2 845 aa9.74□□□□□ -0.85
MSH2-202ENST00000406134 SLC2A7Q6PXP3 512 aa9.74□□□□□ -0.85
MSH2-202ENST00000406134 LYSMD3Q7Z3D4 306 aa9.74□□□□□ -0.85
MSH2-202ENST00000406134 SAPCD2Q86UD0 394 aa9.74□□□□□ -0.85
MSH2-202ENST00000406134 FAM86B1Q8N7N1 296 aa9.74□□□□□ -0.85
MSH2-202ENST00000406134 PCYOX1LQ8NBM8 494 aa9.74□□□□□ -0.85
MSH2-202ENST00000406134 LKAAEAR1Q8TD35 194 aa9.74□□□□□ -0.85
MSH2-202ENST00000406134 TSPEARQ8WU66 669 aa9.74□□□□□ -0.85
MSH2-202ENST00000406134 RMND5BQ96G75 393 aaPredicted RBP9.74□□□□□ -0.85
MSH2-202ENST00000406134 VN1R3Q9BXE9 311 aa9.74□□□□□ -0.85
MSH2-202ENST00000406134 SEZ6LQ9BYH1 1024 aa9.74□□□□□ -0.85
MSH2-202ENST00000406134 CAAP1Q9H8G2 361 aa9.74□□□□□ -0.85
MSH2-202ENST00000406134 RRAGCQ9HB90 399 aa9.74□□□□□ -0.85
MSH2-202ENST00000406134 TLR8Q9NR97 1041 aaKnown RBP9.74□□□□□ -0.85
MSH2-202ENST00000406134 H7C0S8 307 aa9.74□□□□□ -0.85
MSH2-202ENST00000406134 FZD6O60353 706 aa9.74□□□□□ -0.85
MSH2-202ENST00000406134 RHOBTB1O94844 696 aa9.74□□□□□ -0.85
MSH2-202ENST00000406134 MT-ND1P03886 318 aa9.74□□□□□ -0.85
MSH2-202ENST00000406134 SERPINF2P08697 491 aa9.74□□□□□ -0.85
MSH2-202ENST00000406134 HOXB8P17481 243 aaPredicted RBP9.74□□□□□ -0.85
MSH2-202ENST00000406134 EMX2Q04743 252 aa9.74□□□□□ -0.85
MSH2-202ENST00000406134 LIPEQ05469 1076 aa9.74□□□□□ -0.85
MSH2-202ENST00000406134 GPR17Q13304 367 aa9.74□□□□□ -0.85
MSH2-202ENST00000406134 C6orf136Q5SQH8 315 aa9.74□□□□□ -0.85
MSH2-202ENST00000406134 AFTPHQ6ULP2 937 aa9.74□□□□□ -0.85
MSH2-202ENST00000406134 GLT6D1Q7Z4J2 308 aa9.74□□□□□ -0.85
MSH2-202ENST00000406134 DRAXINQ8NBI3 349 aaPredicted RBP9.74□□□□□ -0.85
MSH2-202ENST00000406134 GIPC2Q8TF65 315 aa9.74□□□□□ -0.85
MSH2-202ENST00000406134 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.74□□□□□ -0.853e-9■■■■■ 78.5
MSH2-202ENST00000406134 CCT7Q99832 543 aa9.74□□□□□ -0.85
MSH2-202ENST00000406134 CLK4Q9HAZ1 481 aaKnown RBP9.74□□□□□ -0.85
MSH2-202ENST00000406134 HEBP1Q9NRV9 189 aa9.74□□□□□ -0.85
MSH2-202ENST00000406134 OLA1Q9NTK5 396 aaKnown RBP9.74□□□□□ -0.85
MSH2-202ENST00000406134 UTS2RQ9UKP6 389 aa9.74□□□□□ -0.85
MSH2-202ENST00000406134 CDC14AQ9UNH5 594 aa9.74□□□□□ -0.85
MSH2-202ENST00000406134 SLC8A2Q9UPR5 921 aa9.74□□□□□ -0.85
MSH2-202ENST00000406134 PCDHGC4Q9Y5F7 938 aa9.74□□□□□ -0.85
MSH2-202ENST00000406134 PTPRSQ13332 1948 aa9.74□□□□□ -0.85
MSH2-202ENST00000406134 PLXNA2O75051 1894 aa9.74□□□□□ -0.85
MSH2-202ENST00000406134 TAPBPO15533 448 aa9.74□□□□□ -0.85
MSH2-202ENST00000406134 OR4F21O95013 312 aa9.74□□□□□ -0.85
MSH2-202ENST00000406134 RPLP2P05387 115 aaKnown RBP9.74□□□□□ -0.85
MSH2-202ENST00000406134 UROSP10746 265 aa9.74□□□□□ -0.85
MSH2-202ENST00000406134 GRIK2Q13002 908 aa9.74□□□□□ -0.85
MSH2-202ENST00000406134 ZNF235Q14590 738 aa9.74□□□□□ -0.85
MSH2-202ENST00000406134 CBX2Q14781 532 aaPredicted RBP9.74□□□□□ -0.85
MSH2-202ENST00000406134 TBC1D25Q3MII6 688 aa9.74□□□□□ -0.85
MSH2-202ENST00000406134 SPATS1Q496A3 300 aa9.74□□□□□ -0.85
MSH2-202ENST00000406134 FAM171A1Q5VUB5 890 aa9.74□□□□□ -0.85
MSH2-202ENST00000406134 SPATA19Q7Z5L4 167 aa9.74□□□□□ -0.85
MSH2-202ENST00000406134 MSRB3Q8IXL7 192 aa9.74□□□□□ -0.85
MSH2-202ENST00000406134 C10orf111Q8N326 155 aa9.74□□□□□ -0.85
MSH2-202ENST00000406134 DPP10Q8N608 796 aa9.74□□□□□ -0.85
MSH2-202ENST00000406134 ISOC1Q96CN7 298 aa9.74□□□□□ -0.85
MSH2-202ENST00000406134 CENPNQ96H22 339 aaPredicted RBP9.74□□□□□ -0.85
MSH2-202ENST00000406134 HIC2Q96JB3 615 aa9.74□□□□□ -0.85
MSH2-202ENST00000406134 NUSAP1Q9BXS6 441 aaKnown RBP9.74□□□□□ -0.85
MSH2-202ENST00000406134 MAGEH1Q9H213 219 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms