RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 GPS2Q13227 327 aa11.69□□□□□ -0.54
SPTLC1P3-201ENST00000403408 GPR18Q14330 331 aa11.69□□□□□ -0.54
SPTLC1P3-201ENST00000403408 KRT31Q15323 416 aa11.69□□□□□ -0.54
SPTLC1P3-201ENST00000403408 CHRNA6Q15825 494 aa11.69□□□□□ -0.54
SPTLC1P3-201ENST00000403408 SEPT7Q16181 437 aaKnown RBP11.69□□□□□ -0.54
SPTLC1P3-201ENST00000403408 POLNQ7Z5Q5 900 aa11.69□□□□□ -0.54
SPTLC1P3-201ENST00000403408 ADGRG6Q86SQ4 1221 aa11.69□□□□□ -0.54
SPTLC1P3-201ENST00000403408 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.69□□□□□ -0.54
SPTLC1P3-201ENST00000403408 ARRDC2Q8TBH0 407 aa11.69□□□□□ -0.54
SPTLC1P3-201ENST00000403408 LRRN4Q8WUT4 740 aa11.69□□□□□ -0.54
SPTLC1P3-201ENST00000403408 THAP4Q8WY91 577 aa11.69□□□□□ -0.54
SPTLC1P3-201ENST00000403408 OR2AG1Q9H205 316 aa11.69□□□□□ -0.54
SPTLC1P3-201ENST00000403408 CARD9Q9H257 536 aa11.69□□□□□ -0.54
SPTLC1P3-201ENST00000403408 STN1Q9H668 368 aaKnown RBP11.69□□□□□ -0.54
SPTLC1P3-201ENST00000403408 SLC40A1Q9NP59 571 aa11.69□□□□□ -0.54
SPTLC1P3-201ENST00000403408 ACSS2Q9NR19 701 aa11.69□□□□□ -0.54
SPTLC1P3-201ENST00000403408 EPHA6Q9UF33 1036 aa11.69□□□□□ -0.54
SPTLC1P3-201ENST00000403408 TMPRSS11EQ9UL52 423 aa11.69□□□□□ -0.54
SPTLC1P3-201ENST00000403408 FARSAQ9Y285 508 aaKnown RBP11.69□□□□□ -0.54
SPTLC1P3-201ENST00000403408 WDR37Q9Y2I8 494 aa11.69□□□□□ -0.54
SPTLC1P3-201ENST00000403408 DOCK10Q96BY6 2186 aa11.69□□□□□ -0.54
SPTLC1P3-201ENST00000403408 ANKRD12Q6UB98 2062 aa11.68□□□□□ -0.54
SPTLC1P3-201ENST00000403408 A6NL46 340 aa11.68□□□□□ -0.54
SPTLC1P3-201ENST00000403408 OR5K4A6NMS3 321 aa11.68□□□□□ -0.54
SPTLC1P3-201ENST00000403408 EIF3CLB5ME19 914 aaKnown RBP11.68□□□□□ -0.54
SPTLC1P3-201ENST00000403408 ZNF185O15231 689 aa11.68□□□□□ -0.54
SPTLC1P3-201ENST00000403408 CAPN1P07384 714 aa11.68□□□□□ -0.54
SPTLC1P3-201ENST00000403408 ZNF30P17039 623 aa11.68□□□□□ -0.54
SPTLC1P3-201ENST00000403408 AMD1P17707 334 aa11.68□□□□□ -0.54
SPTLC1P3-201ENST00000403408 LPOP22079 712 aaPredicted RBP11.68□□□□□ -0.54
SPTLC1P3-201ENST00000403408 RPL10P27635 214 aaKnown RBP11.68□□□□□ -0.54
SPTLC1P3-201ENST00000403408 TUBB3Q13509 450 aa11.68□□□□□ -0.54
SPTLC1P3-201ENST00000403408 RAPSNQ13702 412 aa11.68□□□□□ -0.54
SPTLC1P3-201ENST00000403408 SMTNL2Q2TAL5 461 aa11.68□□□□□ -0.54
SPTLC1P3-201ENST00000403408 RALGPS1Q5JS13 557 aa11.68□□□□□ -0.54
SPTLC1P3-201ENST00000403408 CRTC3Q6UUV7 619 aa11.68□□□□□ -0.54
SPTLC1P3-201ENST00000403408 SYVN1Q86TM6 617 aa11.68□□□□□ -0.54
SPTLC1P3-201ENST00000403408 CISD2Q8N5K1 135 aaKnown RBP11.68□□□□□ -0.54
SPTLC1P3-201ENST00000403408 ZBTB2Q8N680 514 aa11.68□□□□□ -0.54
SPTLC1P3-201ENST00000403408 PNPLA2Q96AD5 504 aa11.68□□□□□ -0.54
SPTLC1P3-201ENST00000403408 CSPG4P5Q96PW8 444 aa11.68□□□□□ -0.54
SPTLC1P3-201ENST00000403408 LYSMD1Q96S90 227 aa11.68□□□□□ -0.54
SPTLC1P3-201ENST00000403408 EIF3CQ99613 913 aaKnown RBP11.68□□□□□ -0.54
SPTLC1P3-201ENST00000403408 TDRD1Q9BXT4 1180 aaKnown RBP11.68□□□□□ -0.54
SPTLC1P3-201ENST00000403408 GPR87Q9BY21 358 aa11.68□□□□□ -0.54
SPTLC1P3-201ENST00000403408 CHST8Q9H2A9 424 aa11.68□□□□□ -0.54
SPTLC1P3-201ENST00000403408 OSGEPL1Q9H4B0 414 aa11.68□□□□□ -0.54
SPTLC1P3-201ENST00000403408 RMI1Q9H9A7 625 aa11.68□□□□□ -0.54
SPTLC1P3-201ENST00000403408 SLAMF7Q9NQ25 335 aa11.68□□□□□ -0.54
SPTLC1P3-201ENST00000403408 SEPT11Q9NVA2 429 aaKnown RBP11.68□□□□□ -0.54
SPTLC1P3-201ENST00000403408 SLC5A6Q9Y289 635 aa11.68□□□□□ -0.54
SPTLC1P3-201ENST00000403408 ZNF451Q9Y4E5 1061 aa11.68□□□□□ -0.54
SPTLC1P3-201ENST00000403408 ZNF469Q96JG9 3925 aaPredicted RBP11.67□□□□□ -0.54
SPTLC1P3-201ENST00000403408 CHUKO15111 745 aa11.67□□□□□ -0.54
SPTLC1P3-201ENST00000403408 DDX3YO15523 660 aaKnown RBP11.67□□□□□ -0.54
SPTLC1P3-201ENST00000403408 MTX2O75431 263 aa11.67□□□□□ -0.54
SPTLC1P3-201ENST00000403408 VIPP01282 170 aa11.67□□□□□ -0.54
SPTLC1P3-201ENST00000403408 PYGLP06737 847 aa11.67□□□□□ -0.54
SPTLC1P3-201ENST00000403408 CA5AP35218 305 aa11.67□□□□□ -0.54
SPTLC1P3-201ENST00000403408 NOP2P46087 812 aaKnown RBP11.67□□□□□ -0.54
SPTLC1P3-201ENST00000403408 DRG2P55039 364 aaKnown RBP11.67□□□□□ -0.54
SPTLC1P3-201ENST00000403408 RIPPLY3P57055 190 aa11.67□□□□□ -0.54
SPTLC1P3-201ENST00000403408 DPYSL2Q16555 572 aa11.67□□□□□ -0.54
SPTLC1P3-201ENST00000403408 QPCTQ16769 361 aa11.67□□□□□ -0.54
SPTLC1P3-201ENST00000403408 MARC1Q5VT66 337 aa11.67□□□□□ -0.54
SPTLC1P3-201ENST00000403408 CDKAL1Q5VV42 579 aa11.67□□□□□ -0.54
SPTLC1P3-201ENST00000403408 ALG1LQ6GMV1 187 aa11.67□□□□□ -0.54
SPTLC1P3-201ENST00000403408 IRGCQ6NXR0 463 aa11.67□□□□□ -0.54
SPTLC1P3-201ENST00000403408 ABRAXAS1Q6UWZ7 409 aa11.67□□□□□ -0.54
SPTLC1P3-201ENST00000403408 C11orf96Q7Z7L8 435 aa11.67□□□□□ -0.54
SPTLC1P3-201ENST00000403408 PHYKPLQ8IUZ5 450 aa11.67□□□□□ -0.54
SPTLC1P3-201ENST00000403408 TMEM151BQ8IW70 566 aa11.67□□□□□ -0.54
SPTLC1P3-201ENST00000403408 GPR150Q8NGU9 434 aa11.67□□□□□ -0.54
SPTLC1P3-201ENST00000403408 PPM1MQ96MI6 270 aa11.67□□□□□ -0.54
SPTLC1P3-201ENST00000403408 BARD1Q99728 777 aaKnown RBP11.67□□□□□ -0.54
SPTLC1P3-201ENST00000403408 MAP3K3Q99759 626 aa11.67□□□□□ -0.54
SPTLC1P3-201ENST00000403408 UNKQ9C0B0 810 aaKnown RBP11.67□□□□□ -0.54
SPTLC1P3-201ENST00000403408 FAM83DQ9H4H8 585 aa11.67□□□□□ -0.54
SPTLC1P3-201ENST00000403408 MAP10Q9P2G4 905 aa11.67□□□□□ -0.54
SPTLC1P3-201ENST00000403408 TRIM10Q9UDY6 481 aa11.67□□□□□ -0.54
SPTLC1P3-201ENST00000403408 RARRES3Q9UL19 164 aa11.67□□□□□ -0.54
SPTLC1P3-201ENST00000403408 DNAJC16Q9Y2G8 782 aa11.67□□□□□ -0.54
SPTLC1P3-201ENST00000403408 ANKRD62A6NC57 917 aa11.66□□□□□ -0.54
SPTLC1P3-201ENST00000403408 TMCO5BA8MYB1 307 aa11.66□□□□□ -0.54
SPTLC1P3-201ENST00000403408 MASP2O00187 686 aa11.66□□□□□ -0.54
SPTLC1P3-201ENST00000403408 DPM1O60762 260 aa11.66□□□□□ -0.54
SPTLC1P3-201ENST00000403408 MT-ND3P03897 115 aa11.66□□□□□ -0.54
SPTLC1P3-201ENST00000403408 MMP2P08253 660 aa11.66□□□□□ -0.54
SPTLC1P3-201ENST00000403408 SLC2A4P14672 509 aa11.66□□□□□ -0.54
SPTLC1P3-201ENST00000403408 ZNF7P17097 686 aaPredicted RBP11.66□□□□□ -0.54
SPTLC1P3-201ENST00000403408 EEF1GP26641 437 aaKnown RBP11.66□□□□□ -0.54
SPTLC1P3-201ENST00000403408 SYCP1Q15431 976 aa11.66□□□□□ -0.54
SPTLC1P3-201ENST00000403408 GPR19Q15760 415 aa11.66□□□□□ -0.54
SPTLC1P3-201ENST00000403408 PLEKHS1Q5SXH7 462 aa11.66□□□□□ -0.54
SPTLC1P3-201ENST00000403408 FBXO38Q6PIJ6 1188 aa11.66□□□□□ -0.54
SPTLC1P3-201ENST00000403408 IRF2BP2Q7Z5L9 587 aa11.66□□□□□ -0.54
SPTLC1P3-201ENST00000403408 PSTKQ8IV42 348 aaKnown RBP11.66□□□□□ -0.54
SPTLC1P3-201ENST00000403408 ATPAF2Q8N5M1 289 aa11.66□□□□□ -0.54
SPTLC1P3-201ENST00000403408 ENDOVQ8N8Q3 282 aaKnown RBP11.66□□□□□ -0.54
SPTLC1P3-201ENST00000403408 GLIS1Q8NBF1 620 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms