RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 FUT10Q6P4F1 479 aa13.65□□□□□ -0.22
VAPA-202ENST00000400000 ABRAXAS1Q6UWZ7 409 aa13.65□□□□□ -0.22
VAPA-202ENST00000400000 KCNU1A8MYU2 1149 aa13.65□□□□□ -0.22
VAPA-202ENST00000400000 PLGLB1Q02325 96 aa13.65□□□□□ -0.22
VAPA-202ENST00000400000 FOLH1Q04609 750 aa13.65□□□□□ -0.22
VAPA-202ENST00000400000 MON1AQ86VX9 555 aa13.65□□□□□ -0.22
VAPA-202ENST00000400000 METTL27Q8N6F8 245 aaPredicted RBP13.65□□□□□ -0.22
VAPA-202ENST00000400000 AENQ8WTP8 325 aaKnown RBP13.65□□□□□ -0.22
VAPA-202ENST00000400000 BSNDQ8WZ55 320 aa13.65□□□□□ -0.22
VAPA-202ENST00000400000 ERVK-5Q9HDB9 667 aa13.65□□□□□ -0.22
VAPA-202ENST00000400000 DNAJC28Q9NX36 388 aa13.65□□□□□ -0.22
VAPA-202ENST00000400000 GTF2IRD1Q9UHL9 959 aa13.65□□□□□ -0.22
VAPA-202ENST00000400000 PRR5-ARHGAP8B1AHC4 643 aa13.65□□□□□ -0.22
VAPA-202ENST00000400000 IFNA6P05013 189 aa13.65□□□□□ -0.22
VAPA-202ENST00000400000 MYCLP1P12525 358 aaPredicted RBP13.65□□□□□ -0.22
VAPA-202ENST00000400000 IDSP22304 550 aa13.65□□□□□ -0.22
VAPA-202ENST00000400000 SLC26A3P40879 764 aa13.65□□□□□ -0.22
VAPA-202ENST00000400000 RHBDL3P58872 404 aa13.65□□□□□ -0.22
VAPA-202ENST00000400000 ARHGAP8P85298 464 aa13.65□□□□□ -0.22
VAPA-202ENST00000400000 PURAQ00577 322 aaKnown RBP13.65□□□□□ -0.22
VAPA-202ENST00000400000 AUHQ13825 339 aaKnown RBP13.65□□□□□ -0.22
VAPA-202ENST00000400000 FASTKD3Q14CZ7 662 aaKnown RBP13.65□□□□□ -0.22
VAPA-202ENST00000400000 SGCBQ16585 318 aa13.65□□□□□ -0.22
VAPA-202ENST00000400000 ENPP7Q6UWV6 458 aa13.65□□□□□ -0.22
VAPA-202ENST00000400000 FAM71AQ8IYT1 594 aa13.65□□□□□ -0.22
VAPA-202ENST00000400000 LIX1Q8N485 282 aa13.65□□□□□ -0.22
VAPA-202ENST00000400000 SLC4A11Q8NBS3 891 aa13.65□□□□□ -0.22
VAPA-202ENST00000400000 KLRG1Q96E93 195 aa13.65□□□□□ -0.22
VAPA-202ENST00000400000 C12orf66Q96MD2 445 aa13.65□□□□□ -0.22
VAPA-202ENST00000400000 DPYSL5Q9BPU6 564 aa13.65□□□□□ -0.22
VAPA-202ENST00000400000 TBC1D30Q9Y2I9 924 aa13.65□□□□□ -0.22
VAPA-202ENST00000400000 TBX18O95935 607 aa13.65□□□□□ -0.22
VAPA-202ENST00000400000 MYBL2P10244 700 aa13.65□□□□□ -0.22
VAPA-202ENST00000400000 ADSSP30520 456 aa13.65□□□□□ -0.22
VAPA-202ENST00000400000 SEPHS1P49903 392 aa13.65□□□□□ -0.22
VAPA-202ENST00000400000 ARFIP1P53367 373 aa13.65□□□□□ -0.22
VAPA-202ENST00000400000 VLDLRP98155 873 aa13.65□□□□□ -0.22
VAPA-202ENST00000400000 GRM2Q14416 872 aa13.65□□□□□ -0.22
VAPA-202ENST00000400000 PPP1R15BQ5SWA1 713 aa13.65□□□□□ -0.22
VAPA-202ENST00000400000 IKBIPQ70UQ0 350 aa13.65□□□□□ -0.22
VAPA-202ENST00000400000 IQCHQ86VS3 1027 aa13.65□□□□□ -0.22
VAPA-202ENST00000400000 CAMK1DQ8IU85 385 aa13.65□□□□□ -0.22
VAPA-202ENST00000400000 CLP1Q92989 425 aaKnown RBP13.65□□□□□ -0.22
VAPA-202ENST00000400000 HSFY1Q96LI6 401 aa13.65□□□□□ -0.22
VAPA-202ENST00000400000 RIPOR3Q96MK2 946 aa13.65□□□□□ -0.22
VAPA-202ENST00000400000 GORASP1Q9BQQ3 440 aa13.65□□□□□ -0.22
VAPA-202ENST00000400000 SMG9Q9H0W8 520 aaKnown RBP13.65□□□□□ -0.22
VAPA-202ENST00000400000 SRMSQ9H3Y6 488 aa13.65□□□□□ -0.22
VAPA-202ENST00000400000 PIGUQ9H490 435 aa13.65□□□□□ -0.22
VAPA-202ENST00000400000 HMG20AQ9NP66 347 aa13.65□□□□□ -0.22
VAPA-202ENST00000400000 DLC1Q96QB1 1528 aa13.65□□□□□ -0.22
VAPA-202ENST00000400000 ZNF879B4DU55 563 aa13.65□□□□□ -0.22
VAPA-202ENST00000400000 OR7A10O76100 309 aa13.65□□□□□ -0.22
VAPA-202ENST00000400000 SMPD1P17405 629 aa13.65□□□□□ -0.22
VAPA-202ENST00000400000 NMBRP28336 390 aa13.65□□□□□ -0.22
VAPA-202ENST00000400000 CBX5P45973 191 aa13.65□□□□□ -0.22
VAPA-202ENST00000400000 PTDSS1P48651 473 aaKnown RBP13.65□□□□□ -0.22
VAPA-202ENST00000400000 MAN2A2P49641 1150 aa13.65□□□□□ -0.22
VAPA-202ENST00000400000 MAPK12P53778 367 aa13.65□□□□□ -0.22
VAPA-202ENST00000400000 MYBPC3Q14896 1274 aa13.65□□□□□ -0.22
VAPA-202ENST00000400000 SLC25A52Q3SY17 297 aa13.65□□□□□ -0.22
VAPA-202ENST00000400000 APBB2Q92870 758 aa13.65□□□□□ -0.22
VAPA-202ENST00000400000 GAL3ST3Q96A11 431 aa13.65□□□□□ -0.22
VAPA-202ENST00000400000 LRTM1Q9HBL6 345 aa13.65□□□□□ -0.22
VAPA-202ENST00000400000 PLAGL1Q9UM63 463 aa13.65□□□□□ -0.22
VAPA-202ENST00000400000 TESMINQ9Y4I5 508 aa13.65□□□□□ -0.22
VAPA-202ENST00000400000 PGRMC2O15173 223 aa13.64□□□□□ -0.23
VAPA-202ENST00000400000 CCNOP22674 350 aa13.64□□□□□ -0.23
VAPA-202ENST00000400000 DDX6P26196 483 aaKnown RBP eCLIP13.64□□□□□ -0.23
VAPA-202ENST00000400000 GDI1P31150 447 aa13.64□□□□□ -0.23
VAPA-202ENST00000400000 MNDAP41218 407 aa13.64□□□□□ -0.23
VAPA-202ENST00000400000 AVPR1BP47901 424 aa13.64□□□□□ -0.23
VAPA-202ENST00000400000 ARHGDIBP52566 201 aa13.64□□□□□ -0.23
VAPA-202ENST00000400000 TXNL4AP83876 142 aaKnown RBP13.64□□□□□ -0.23
VAPA-202ENST00000400000 RIN1Q13671 783 aa13.64□□□□□ -0.23
VAPA-202ENST00000400000 GANABQ14697 944 aaKnown RBP13.64□□□□□ -0.23
VAPA-202ENST00000400000 ANXA8L1Q5VT79 327 aa13.64□□□□□ -0.23
VAPA-202ENST00000400000 GPR20Q99678 358 aa13.64□□□□□ -0.23
VAPA-202ENST00000400000 TBC1D10AQ9BXI6 508 aa13.64□□□□□ -0.23
VAPA-202ENST00000400000 TRIM38O00635 465 aa13.64□□□□□ -0.23
VAPA-202ENST00000400000 RPP40O75818 363 aaKnown RBP13.64□□□□□ -0.23
VAPA-202ENST00000400000 ITGAVP06756 1048 aa13.64□□□□□ -0.23
VAPA-202ENST00000400000 CBLP22681 906 aa13.64□□□□□ -0.23
VAPA-202ENST00000400000 ODF4Q2M2E3 257 aa13.64□□□□□ -0.23
VAPA-202ENST00000400000 TBC1D25Q3MII6 688 aa13.64□□□□□ -0.23
VAPA-202ENST00000400000 PLPPR4Q7Z2D5 763 aa13.64□□□□□ -0.23
VAPA-202ENST00000400000 SNX33Q8WV41 574 aa13.64□□□□□ -0.23
VAPA-202ENST00000400000 COX4I2Q96KJ9 171 aa13.64□□□□□ -0.23
VAPA-202ENST00000400000 ZFRQ96KR1 1074 aaKnown RBP13.64□□□□□ -0.23
VAPA-202ENST00000400000 C1QTNF1Q9BXJ1 281 aa13.64□□□□□ -0.23
VAPA-202ENST00000400000 NCDNQ9UBB6 729 aa13.64□□□□□ -0.23
VAPA-202ENST00000400000 MRPS33Q9Y291 106 aaKnown RBP13.64□□□□□ -0.23
VAPA-202ENST00000400000 SMIM28A0A1B0GU29 152 aa13.64□□□□□ -0.23
VAPA-202ENST00000400000 MYOCOSA0A1B0GUC4 107 aa13.64□□□□□ -0.23
VAPA-202ENST00000400000 GOT2P00505 430 aaKnown RBP13.64□□□□□ -0.23
VAPA-202ENST00000400000 STAT5AP42229 794 aa13.64□□□□□ -0.23
VAPA-202ENST00000400000 DHDDSQ86SQ9 333 aa13.64□□□□□ -0.23
VAPA-202ENST00000400000 RDH11Q8TC12 318 aa13.64□□□□□ -0.23
VAPA-202ENST00000400000 FNIP1Q8TF40 1166 aa13.64□□□□□ -0.23
VAPA-202ENST00000400000 CKAP2Q8WWK9 683 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms