RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 ITPRIPL1Q6GPH6 555 aa13.24□□□□□ -0.29
VCX3A-202ENST00000398729 CRTC3Q6UUV7 619 aa13.24□□□□□ -0.29
VCX3A-202ENST00000398729 ZNF574Q6ZN55 896 aaPredicted RBP13.24□□□□□ -0.29
VCX3A-202ENST00000398729 ADGRG6Q86SQ4 1221 aa13.24□□□□□ -0.29
VCX3A-202ENST00000398729 SLC9B2Q86UD5 537 aa13.24□□□□□ -0.29
VCX3A-202ENST00000398729 GAS2L3Q86XJ1 694 aa13.24□□□□□ -0.29
VCX3A-202ENST00000398729 TXLNBQ8N3L3 684 aa13.24□□□□□ -0.29
VCX3A-202ENST00000398729 AVL9Q8NBF6 648 aa13.24□□□□□ -0.29
VCX3A-202ENST00000398729 ACTL9Q8TC94 416 aa13.24□□□□□ -0.29
VCX3A-202ENST00000398729 SH3KBP1Q96B97 665 aa13.24□□□□□ -0.29
VCX3A-202ENST00000398729 CCDC74BQ96LY2 380 aa13.24□□□□□ -0.29
VCX3A-202ENST00000398729 VPS35Q96QK1 796 aa13.24□□□□□ -0.29
VCX3A-202ENST00000398729 LACRTQ9GZZ8 138 aa13.24□□□□□ -0.29
VCX3A-202ENST00000398729 GBA3Q9H227 469 aa13.24□□□□□ -0.29
VCX3A-202ENST00000398729 OSGEPL1Q9H4B0 414 aa13.24□□□□□ -0.29
VCX3A-202ENST00000398729 SARS2Q9NP81 518 aaKnown RBP13.24□□□□□ -0.29
VCX3A-202ENST00000398729 WDR70Q9NW82 654 aa13.24□□□□□ -0.29
VCX3A-202ENST00000398729 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.24□□□□□ -0.29
VCX3A-202ENST00000398729 ACSL6Q9UKU0 697 aa13.24□□□□□ -0.29
VCX3A-202ENST00000398729 ADGRG1Q9Y653 693 aa13.24□□□□□ -0.29
VCX3A-202ENST00000398729 A6NCN8 305 aa13.23□□□□□ -0.29
VCX3A-202ENST00000398729 CHUKO15111 745 aa13.23□□□□□ -0.29
VCX3A-202ENST00000398729 KMOO15229 486 aa13.23□□□□□ -0.29
VCX3A-202ENST00000398729 DUX1O43812 170 aa13.23□□□□□ -0.29
VCX3A-202ENST00000398729 MTX2O75431 263 aa13.23□□□□□ -0.29
VCX3A-202ENST00000398729 ANXA9O76027 345 aa13.23□□□□□ -0.29
VCX3A-202ENST00000398729 STK10O94804 968 aaKnown RBP13.23□□□□□ -0.29
VCX3A-202ENST00000398729 CDK14O94921 469 aa13.23□□□□□ -0.29
VCX3A-202ENST00000398729 TJP3O95049 919 aa13.23□□□□□ -0.29
VCX3A-202ENST00000398729 RBP3P10745 1247 aa13.23□□□□□ -0.29
VCX3A-202ENST00000398729 CSF2RBP32927 897 aa13.23□□□□□ -0.29
VCX3A-202ENST00000398729 ETV5P41161 510 aa13.23□□□□□ -0.29
VCX3A-202ENST00000398729 CHRNA4P43681 627 aa13.23□□□□□ -0.29
VCX3A-202ENST00000398729 CSRP3P50461 194 aa13.23□□□□□ -0.29
VCX3A-202ENST00000398729 GEMP55040 296 aa13.23□□□□□ -0.29
VCX3A-202ENST00000398729 EIF3EP60228 445 aaKnown RBP13.23□□□□□ -0.29
VCX3A-202ENST00000398729 GTF2H3Q13889 308 aa13.23□□□□□ -0.29
VCX3A-202ENST00000398729 INSCQ1MX18 579 aa13.23□□□□□ -0.29
VCX3A-202ENST00000398729 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.23□□□□□ -0.29
VCX3A-202ENST00000398729 GLT6D1Q7Z4J2 308 aa13.23□□□□□ -0.29
VCX3A-202ENST00000398729 LRRTM4Q86VH4 590 aa13.23□□□□□ -0.29
VCX3A-202ENST00000398729 ZNF761Q86XN6 746 aaPredicted RBP13.23□□□□□ -0.29
VCX3A-202ENST00000398729 CDKL3Q8IVW4 592 aaPredicted RBP13.23□□□□□ -0.29
VCX3A-202ENST00000398729 TTC30BQ8N4P2 665 aa13.23□□□□□ -0.29
VCX3A-202ENST00000398729 LRRC57Q8N9N7 239 aa13.23□□□□□ -0.29
VCX3A-202ENST00000398729 RCBTB1Q8NDN9 531 aa13.23□□□□□ -0.29
VCX3A-202ENST00000398729 GDAP1Q8TB36 358 aa13.23□□□□□ -0.29
VCX3A-202ENST00000398729 DTX3LQ8TDB6 740 aa13.23□□□□□ -0.29
VCX3A-202ENST00000398729 BLOC1S5Q8TDH9 187 aa13.23□□□□□ -0.29
VCX3A-202ENST00000398729 USP7Q93009 1102 aa13.23□□□□□ -0.29
VCX3A-202ENST00000398729 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.23□□□□□ -0.29
VCX3A-202ENST00000398729 C10orf88Q9H8K7 445 aa13.23□□□□□ -0.29
VCX3A-202ENST00000398729 KLC4Q9NSK0 619 aa13.23□□□□□ -0.29
VCX3A-202ENST00000398729 IMPACTQ9P2X3 320 aa13.23□□□□□ -0.29
VCX3A-202ENST00000398729 IL17BQ9UHF5 180 aa13.23□□□□□ -0.29
VCX3A-202ENST00000398729 AMFRQ9UKV5 643 aa13.23□□□□□ -0.29
VCX3A-202ENST00000398729 PKP3Q9Y446 797 aa13.23□□□□□ -0.29
VCX3A-202ENST00000398729 PRAMEF33A0A0G2JMD5 474 aa13.22□□□□□ -0.29
VCX3A-202ENST00000398729 GRID2IPA4D2P6 1211 aa13.22□□□□□ -0.29
VCX3A-202ENST00000398729 PRAMEF10O60809 474 aa13.22□□□□□ -0.29
VCX3A-202ENST00000398729 PPFIA2O75334 1257 aa13.22□□□□□ -0.29
VCX3A-202ENST00000398729 THRAP10827 490 aa13.22□□□□□ -0.29
VCX3A-202ENST00000398729 ZNF7P17097 686 aaPredicted RBP13.22□□□□□ -0.29
VCX3A-202ENST00000398729 CSTF2P33240 577 aaKnown RBP eCLIP13.22□□□□□ -0.29
VCX3A-202ENST00000398729 SPAM1P38567 509 aa13.22□□□□□ -0.29
VCX3A-202ENST00000398729 KIF5AQ12840 1032 aa13.22□□□□□ -0.29
VCX3A-202ENST00000398729 NFATC2Q13469 925 aa13.22□□□□□ -0.29
VCX3A-202ENST00000398729 PRPSAP1Q14558 356 aa13.22□□□□□ -0.29
VCX3A-202ENST00000398729 PLA2G4EQ3MJ16 856 aa13.22□□□□□ -0.29
VCX3A-202ENST00000398729 ATP13A5Q4VNC0 1218 aa13.22□□□□□ -0.29
VCX3A-202ENST00000398729 TMEM71Q6P5X7 295 aa13.22□□□□□ -0.29
VCX3A-202ENST00000398729 DARS2Q6PI48 645 aaKnown RBP13.22□□□□□ -0.29
VCX3A-202ENST00000398729 CCDC81Q6ZN84 652 aa13.22□□□□□ -0.29
VCX3A-202ENST00000398729 PEX26Q7Z412 305 aa13.22□□□□□ -0.29
VCX3A-202ENST00000398729 SYCE1Q8N0S2 351 aa13.22□□□□□ -0.29
VCX3A-202ENST00000398729 AGBL5Q8NDL9 886 aa13.22□□□□□ -0.29
VCX3A-202ENST00000398729 CCDC112Q8NEF3 446 aa13.22□□□□□ -0.29
VCX3A-202ENST00000398729 BRSK1Q8TDC3 778 aa13.22□□□□□ -0.29
VCX3A-202ENST00000398729 ALG3Q92685 438 aa13.22□□□□□ -0.29
VCX3A-202ENST00000398729 TTC25Q96NG3 672 aa13.22□□□□□ -0.29
VCX3A-202ENST00000398729 CCNL2Q96S94 520 aaPredicted RBP13.22□□□□□ -0.29
VCX3A-202ENST00000398729 TIMM29Q9BSF4 260 aa13.22□□□□□ -0.29
VCX3A-202ENST00000398729 FICDQ9BVA6 458 aa13.22□□□□□ -0.29
VCX3A-202ENST00000398729 B3GNT4Q9C0J1 378 aa13.22□□□□□ -0.29
VCX3A-202ENST00000398729 IL26Q9NPH9 171 aa13.22□□□□□ -0.29
VCX3A-202ENST00000398729 PRDM8Q9NQV8 689 aa13.22□□□□□ -0.29
VCX3A-202ENST00000398729 IL17CQ9P0M4 197 aa13.22□□□□□ -0.29
VCX3A-202ENST00000398729 CPNE7Q9UBL6 633 aa13.22□□□□□ -0.29
VCX3A-202ENST00000398729 AAR2Q9Y312 384 aaKnown RBP13.22□□□□□ -0.29
VCX3A-202ENST00000398729 GLYATL1P3A0A0U1RQE8 302 aa13.21□□□□□ -0.29
VCX3A-202ENST00000398729 GOLGA6L9A6NEM1 432 aa13.21□□□□□ -0.29
VCX3A-202ENST00000398729 C9orf172C9J069 976 aa13.21□□□□□ -0.29
VCX3A-202ENST00000398729 KCNN4O15554 427 aa13.21□□□□□ -0.29
VCX3A-202ENST00000398729 ZNF189O75820 626 aaPredicted RBP13.21□□□□□ -0.29
VCX3A-202ENST00000398729 PTMAP06454 111 aaKnown RBP13.21□□□□□ -0.29
VCX3A-202ENST00000398729 LIPCP11150 499 aa13.21□□□□□ -0.29
VCX3A-202ENST00000398729 PYGMP11217 842 aa13.21□□□□□ -0.29
VCX3A-202ENST00000398729 CCL4P13236 92 aa13.21□□□□□ -0.29
VCX3A-202ENST00000398729 VCLP18206 1134 aa13.21□□□□□ -0.29
VCX3A-202ENST00000398729 MPSTP25325 297 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms