RNA–Protein interactions for RNA: ENST00000398179.3

CCBE1-201, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 5 BASIC

Gene CCBE1, Length 5,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-201ENST00000398179 ATXN7L2Q5T6C5 722 aaPredicted RBP12.73□□□□□ -0.37
CCBE1-201ENST00000398179 ZNF615Q8N8J6 731 aa12.73□□□□□ -0.37
CCBE1-201ENST00000398179 DCAF5Q96JK2 942 aa12.73□□□□□ -0.37
CCBE1-201ENST00000398179 USB1Q9BQ65 265 aaKnown RBP12.73□□□□□ -0.37
CCBE1-201ENST00000398179 SGIP1Q9BQI5 828 aa12.73□□□□□ -0.37
CCBE1-201ENST00000398179 HDAC3O15379 428 aa12.72□□□□□ -0.37
CCBE1-201ENST00000398179 MAGEB2O15479 319 aa12.72□□□□□ -0.37
CCBE1-201ENST00000398179 CHRNA1P02708 482 aa12.72□□□□□ -0.37
CCBE1-201ENST00000398179 NCK1P16333 377 aa12.72□□□□□ -0.37
CCBE1-201ENST00000398179 NKX2-5P52952 324 aaPredicted RBP12.72□□□□□ -0.37
CCBE1-201ENST00000398179 USP10Q14694 798 aaKnown RBP12.72□□□□□ -0.37
CCBE1-201ENST00000398179 LURAP1LQ8IV03 231 aa12.72□□□□□ -0.37
CCBE1-201ENST00000398179 PHOX2BQ99453 314 aa12.72□□□□□ -0.37
CCBE1-201ENST00000398179 STRA6Q9BX79 667 aa12.72□□□□□ -0.37
CCBE1-201ENST00000398179 SUCNR1Q9BXA5 334 aa12.72□□□□□ -0.37
CCBE1-201ENST00000398179 ZNF436Q9C0F3 470 aaPredicted RBP12.72□□□□□ -0.37
CCBE1-201ENST00000398179 NUDT15Q9NV35 164 aa12.72□□□□□ -0.37
CCBE1-201ENST00000398179 PKP3Q9Y446 797 aa12.72□□□□□ -0.37
CCBE1-201ENST00000398179 ST14Q9Y5Y6 855 aa12.72□□□□□ -0.37
CCBE1-201ENST00000398179 PLGP00747 810 aaPredicted RBP12.72□□□□□ -0.37
CCBE1-201ENST00000398179 SLC1A6P48664 564 aa12.72□□□□□ -0.37
CCBE1-201ENST00000398179 EPHA10Q5JZY3 1008 aa12.72□□□□□ -0.37
CCBE1-201ENST00000398179 OGFRL1Q5TC84 451 aaPredicted RBP12.72□□□□□ -0.37
CCBE1-201ENST00000398179 C1orf54Q8WWF1 131 aa12.72□□□□□ -0.37
CCBE1-201ENST00000398179 GTF2H4Q92759 462 aa12.72□□□□□ -0.37
CCBE1-201ENST00000398179 INTS12Q96CB8 462 aaKnown RBP12.72□□□□□ -0.37
CCBE1-201ENST00000398179 NEDD4LQ96PU5 975 aa12.72□□□□□ -0.37
CCBE1-201ENST00000398179 VCX2Q9H322 139 aa12.72□□□□□ -0.37
CCBE1-201ENST00000398179 PRDM9Q9NQV7 894 aa12.72□□□□□ -0.37
CCBE1-201ENST00000398179 INTS7Q9NVH2 962 aaKnown RBP12.72□□□□□ -0.37
CCBE1-201ENST00000398179 NDRG3Q9UGV2 375 aa12.72□□□□□ -0.37
CCBE1-201ENST00000398179 SORCS3Q9UPU3 1222 aa12.72□□□□□ -0.37
CCBE1-201ENST00000398179 GOLT1BQ9Y3E0 138 aa12.72□□□□□ -0.37
CCBE1-201ENST00000398179 PCDHA1Q9Y5I3 950 aa12.72□□□□□ -0.37
CCBE1-201ENST00000398179 ABCC1P33527 1531 aa12.72□□□□□ -0.37
CCBE1-201ENST00000398179 DFFBO76075 338 aa12.72□□□□□ -0.37
CCBE1-201ENST00000398179 HSPA2P54652 639 aa12.72□□□□□ -0.37
CCBE1-201ENST00000398179 GRHL2Q6ISB3 625 aa12.72□□□□□ -0.37
CCBE1-201ENST00000398179 C3orf67Q6ZVT6 689 aa12.72□□□□□ -0.37
CCBE1-201ENST00000398179 FBXO22Q8NEZ5 403 aa12.72□□□□□ -0.37
CCBE1-201ENST00000398179 TMEM237Q96Q45 408 aa12.72□□□□□ -0.37
CCBE1-201ENST00000398179 EDEM2Q9BV94 578 aa12.72□□□□□ -0.37
CCBE1-201ENST00000398179 DSN1Q9H410 356 aa12.72□□□□□ -0.37
CCBE1-201ENST00000398179 ZNF408Q9H9D4 720 aa12.72□□□□□ -0.37
CCBE1-201ENST00000398179 PXMP2Q9NR77 195 aa12.72□□□□□ -0.37
CCBE1-201ENST00000398179 CENPMQ9NSP4 180 aa12.72□□□□□ -0.37
CCBE1-201ENST00000398179 NAALAD2Q9Y3Q0 740 aa12.72□□□□□ -0.37
CCBE1-201ENST00000398179 C17orf113A0A1B0GUU1 675 aa12.72□□□□□ -0.37
CCBE1-201ENST00000398179 PAK4O96013 591 aaPredicted RBP12.72□□□□□ -0.37
CCBE1-201ENST00000398179 CPN1P15169 458 aa12.72□□□□□ -0.37
CCBE1-201ENST00000398179 CYP2B6P20813 491 aa12.72□□□□□ -0.37
CCBE1-201ENST00000398179 UBA1P22314 1058 aaKnown RBP12.72□□□□□ -0.37
CCBE1-201ENST00000398179 MC3RP41968 323 aa12.72□□□□□ -0.37
CCBE1-201ENST00000398179 SRP9P49458 86 aaKnown RBP12.72□□□□□ -0.37
CCBE1-201ENST00000398179 B2MP61769 119 aa12.72□□□□□ -0.37
CCBE1-201ENST00000398179 ZBED5Q49AG3 693 aa12.72□□□□□ -0.37
CCBE1-201ENST00000398179 MOB2Q70IA6 237 aa12.72□□□□□ -0.37
CCBE1-201ENST00000398179 ADGRD2Q7Z7M1 963 aa12.72□□□□□ -0.37
CCBE1-201ENST00000398179 ZNF420Q8TAQ5 688 aaPredicted RBP12.72□□□□□ -0.37
CCBE1-201ENST00000398179 RSPRY1Q96DX4 576 aa12.72□□□□□ -0.37
CCBE1-201ENST00000398179 KCNQ5Q9NR82 932 aa12.72□□□□□ -0.37
CCBE1-201ENST00000398179 ITGA11Q9UKX5 1188 aa12.72□□□□□ -0.37
CCBE1-201ENST00000398179 ERGIC3Q9Y282 383 aa12.72□□□□□ -0.37
CCBE1-201ENST00000398179 NEURL1BA8MQ27 555 aa12.72□□□□□ -0.37
CCBE1-201ENST00000398179 SLC33A1O00400 549 aaPredicted RBP12.72□□□□□ -0.37
CCBE1-201ENST00000398179 GOSR2O14653 212 aa12.72□□□□□ -0.37
CCBE1-201ENST00000398179 KHNYNO15037 678 aaKnown RBP12.72□□□□□ -0.37
CCBE1-201ENST00000398179 RFPL2O75678 378 aa12.72□□□□□ -0.37
CCBE1-201ENST00000398179 SMIM6P0DI80 62 aa12.72□□□□□ -0.37
CCBE1-201ENST00000398179 EPCAMP16422 314 aa12.72□□□□□ -0.37
CCBE1-201ENST00000398179 IL20RBQ6UXL0 311 aa12.72□□□□□ -0.37
CCBE1-201ENST00000398179 CCNJLQ8IV13 435 aa12.72□□□□□ -0.37
CCBE1-201ENST00000398179 DSELQ8IZU8 1212 aa12.72□□□□□ -0.37
CCBE1-201ENST00000398179 TBCKQ8TEA7 893 aa12.72□□□□□ -0.37
CCBE1-201ENST00000398179 RNF25Q96BH1 459 aaPredicted RBP12.72□□□□□ -0.37
CCBE1-201ENST00000398179 TIFAQ96CG3 184 aa12.72□□□□□ -0.37
CCBE1-201ENST00000398179 ZNF333Q96JL9 665 aa12.72□□□□□ -0.37
CCBE1-201ENST00000398179 MTFR1LQ9H019 292 aa12.72□□□□□ -0.37
CCBE1-201ENST00000398179 AKIRIN1Q9H9L7 192 aaPredicted RBP12.72□□□□□ -0.37
CCBE1-201ENST00000398179 IL1RAPQ9NPH3 570 aa12.72□□□□□ -0.37
CCBE1-201ENST00000398179 SEC14L3Q9UDX4 400 aa12.72□□□□□ -0.37
CCBE1-201ENST00000398179 INVSQ9Y283 1065 aa12.72□□□□□ -0.37
CCBE1-201ENST00000398179 PRORSD1PA6NEY8 169 aa12.71□□□□□ -0.37
CCBE1-201ENST00000398179 NEMP1O14524 444 aa12.71□□□□□ -0.37
CCBE1-201ENST00000398179 CYP17A1P05093 508 aa12.71□□□□□ -0.37
CCBE1-201ENST00000398179 NME5P56597 212 aa12.71□□□□□ -0.37
CCBE1-201ENST00000398179 NCALDP61601 193 aa12.71□□□□□ -0.37
CCBE1-201ENST00000398179 MC2RQ01718 297 aa12.71□□□□□ -0.37
CCBE1-201ENST00000398179 ZC3H14Q6PJT7 736 aaKnown RBP12.71□□□□□ -0.37
CCBE1-201ENST00000398179 ZNF540Q8NDQ6 660 aa12.71□□□□□ -0.37
CCBE1-201ENST00000398179 CENPIQ92674 756 aaPredicted RBP12.71□□□□□ -0.37
CCBE1-201ENST00000398179 DYNLL2Q96FJ2 89 aa12.71□□□□□ -0.37
CCBE1-201ENST00000398179 CNTNAP3BQ96NU0 1288 aa12.71□□□□□ -0.37
CCBE1-201ENST00000398179 SLC25A23Q9BV35 468 aa12.71□□□□□ -0.37
CCBE1-201ENST00000398179 RNF26Q9BY78 433 aaPredicted RBP12.71□□□□□ -0.37
CCBE1-201ENST00000398179 TXLNGYQ9BZA5 131 aa12.71□□□□□ -0.37
CCBE1-201ENST00000398179 ISCUQ9H1K1 167 aa12.71□□□□□ -0.37
CCBE1-201ENST00000398179 NPAP1Q9NZP6 1156 aa12.71□□□□□ -0.37
CCBE1-201ENST00000398179 MARCOQ9UEW3 520 aaPredicted RBP12.71□□□□□ -0.37
CCBE1-201ENST00000398179 CNOT8Q9UFF9 292 aaKnown RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms