RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 C17orf62Q9BQA9 187 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 C1QTNF7Q9BXJ2 289 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 GON7Q9BXV9 100 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 TIGARQ9NQ88 270 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 SOHLH2Q9NX45 425 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 STOML1Q9UBI4 398 aa6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 COL2A1P02458 1487 aaPredicted RBP6.55□□□□□ -1.36
TM9SF4-202ENST00000398022 C5orf51A6NDU8 294 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 CXCL11O14625 94 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 LDLRAD4O15165 306 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 NUPL2O15504 423 aaKnown RBP6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 GABBR2O75899 941 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 SPDEFO95238 335 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 ZBTB11O95625 1053 aaPredicted RBP6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 CYC1P08574 325 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 ZNF888P0CJ79 500 aaPredicted RBP6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 ZNF12P17014 697 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 CPN2P22792 545 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 SERPINB1P30740 379 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 GP5P40197 560 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 GABRB2P47870 512 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 YWHAHQ04917 246 aaPredicted RBP6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 UBE3AQ05086 875 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 PCDH1Q08174 1060 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 PDK4Q16654 411 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 TIGD2Q4W5G0 525 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 B3GNT9Q6UX72 402 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 FAM122BQ7Z309 247 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 CPNE8Q86YQ8 564 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 RASAL3Q86YV0 1011 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 TIGD4Q8IY51 512 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 NAT14Q8WUY8 206 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 CPA5Q8WXQ8 436 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 NRCAMQ92823 1304 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 SLC25A36Q96CQ1 311 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 C11orf70Q9BRQ4 267 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 ZSCAN5AQ9BUG6 496 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 SLC25A23Q9BV35 468 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 SLC22A4Q9H015 551 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 KLC2Q9H0B6 622 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 TDRD3Q9H7E2 651 aaKnown RBP6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 AP4E1Q9UPM8 1137 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 RNF24Q9Y225 148 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 ATRNL1Q5VV63 1379 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 TAF4O00268 1085 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 PGRMC2O15173 223 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 NOBOXO60393 691 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 PROCP04070 461 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 STSP08842 583 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 GRK3P35626 688 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 ANXA11P50995 505 aaKnown RBP6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 ARSEP51690 589 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 CLCN5P51795 746 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 RIDAP52758 137 aaKnown RBP6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 CACNA2D1P54289 1103 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 POU6F2P78424 691 aaPredicted RBP6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 BTKQ06187 659 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 GPS1Q13098 491 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 MPP2Q14168 576 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 LIN52Q52LA3 116 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 ZNF813Q6ZN06 617 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 THAP5Q7Z6K1 395 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 DCP2Q8IU60 420 aaKnown RBP6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 ARID3BQ8IVW6 561 aaPredicted RBP6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 OR2C3Q8N628 320 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 OR52M1Q8NGK5 317 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 GIPC3Q8TF64 312 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 MCUR1Q96AQ8 359 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 KIAA1143Q96AT1 154 aaPredicted RBP6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 ZNF764Q96H86 408 aaPredicted RBP6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 AHCYL2Q96HN2 611 aaKnown RBP6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 APOPT1Q96IL0 206 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 C17orf80Q9BSJ5 609 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 MKRN2Q9H000 416 aaKnown RBP6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 SAR1AQ9NR31 198 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 CYP39A1Q9NYL5 469 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 TRMT6Q9UJA5 497 aaKnown RBP6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 ITGA11Q9UKX5 1188 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 SMIM31A0A1B0GVY4 71 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 A8MUI8 341 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 TO15178 435 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 EFSO43281 561 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 DENRO43583 198 aaKnown RBP6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 NUDT21O43809 227 aaKnown RBP6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 GPX5O75715 221 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 TMEM63AO94886 807 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 DLGAP3O95886 979 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 RALBP11234 206 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 UNGP13051 313 aaPredicted RBP6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 MARK3P27448 753 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 IRS1P35568 1242 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 HMGCLP35914 325 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 CCT3P49368 545 aaKnown RBP6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 CLCNKAP51800 687 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 STX5Q13190 355 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 RPS6KA2Q15349 733 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 ZYXQ15942 572 aaKnown RBP6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 DENND5AQ6IQ26 1287 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 FUT10Q6P4F1 479 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 DCUN1D2Q6PH85 259 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms