RNA–Protein interactions for RNA: ENST00000396603.6

CLTA-203, Transcript of clathrin light chain A, humanhuman

TSL 1 (best) BASIC

Gene CLTA, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-203ENST00000396603 SLC25A14O95258 325 aaPredicted RBP16.07■□□□□ 0.16
CLTA-203ENST00000396603 RECKO95980 971 aa16.07■□□□□ 0.16
CLTA-203ENST00000396603 ZFXP17010 805 aaPredicted RBP16.07■□□□□ 0.16
CLTA-203ENST00000396603 ZNF8P17098 575 aaPredicted RBP16.07■□□□□ 0.16
CLTA-203ENST00000396603 KDELR1P24390 212 aa16.07■□□□□ 0.16
CLTA-203ENST00000396603 CASRP41180 1078 aa16.07■□□□□ 0.16
CLTA-203ENST00000396603 STAT5AP42229 794 aa16.07■□□□□ 0.16
CLTA-203ENST00000396603 NFKB2Q00653 900 aa16.07■□□□□ 0.16
CLTA-203ENST00000396603 TLE1Q04724 770 aa16.07■□□□□ 0.16
CLTA-203ENST00000396603 SLC10A2Q12908 348 aaPredicted RBP16.07■□□□□ 0.16
CLTA-203ENST00000396603 IL11RAQ14626 422 aa16.07■□□□□ 0.16
CLTA-203ENST00000396603 PDK1Q15118 436 aa16.07■□□□□ 0.16
CLTA-203ENST00000396603 AGAP9Q5VTM2 703 aa16.07■□□□□ 0.16
CLTA-203ENST00000396603 SLC9A4Q6AI14 798 aa16.07■□□□□ 0.16
CLTA-203ENST00000396603 TMEM26Q6ZUK4 368 aa16.07■□□□□ 0.16
CLTA-203ENST00000396603 TMC3Q7Z5M5 1100 aa16.07■□□□□ 0.16
CLTA-203ENST00000396603 DAAM2Q86T65 1068 aa16.07■□□□□ 0.16
CLTA-203ENST00000396603 RHOT1Q8IXI2 618 aa16.07■□□□□ 0.16
CLTA-203ENST00000396603 PLD5Q8N7P1 536 aa16.07■□□□□ 0.16
CLTA-203ENST00000396603 CNTD1Q8N815 330 aa16.07■□□□□ 0.16
CLTA-203ENST00000396603 UBE2Q2Q8WVN8 375 aa16.07■□□□□ 0.16
CLTA-203ENST00000396603 GLYATL1Q969I3 302 aa16.07■□□□□ 0.16
CLTA-203ENST00000396603 TADA1Q96BN2 335 aa16.07■□□□□ 0.16
CLTA-203ENST00000396603 IMP4Q96G21 291 aaKnown RBP16.07■□□□□ 0.16
CLTA-203ENST00000396603 C9orf72Q96LT7 481 aa16.07■□□□□ 0.16
CLTA-203ENST00000396603 PLEKHG4BQ96PX9 1271 aa16.07■□□□□ 0.16
CLTA-203ENST00000396603 VPS35Q96QK1 796 aa16.07■□□□□ 0.16
CLTA-203ENST00000396603 SPATA16Q9BXB7 569 aa16.07■□□□□ 0.16
CLTA-203ENST00000396603 RAB33BQ9H082 229 aa16.07■□□□□ 0.16
CLTA-203ENST00000396603 SLC25A51Q9H1U9 297 aa16.07■□□□□ 0.16
CLTA-203ENST00000396603 DDX56Q9NY93 547 aaKnown RBP16.07■□□□□ 0.16
CLTA-203ENST00000396603 KCTD3Q9Y597 815 aa16.07■□□□□ 0.16
CLTA-203ENST00000396603 ZFC3H1O60293 1989 aaKnown RBP16.07■□□□□ 0.16
CLTA-203ENST00000396603 MAST4O15021 2626 aa16.06■□□□□ 0.16
CLTA-203ENST00000396603 LOC101059948A0A1B0GTJ6 334 aa16.06■□□□□ 0.16
CLTA-203ENST00000396603 A8MU76 341 aa16.06■□□□□ 0.16
CLTA-203ENST00000396603 KCNK1O00180 336 aa16.06■□□□□ 0.16
CLTA-203ENST00000396603 PPP1R12AO14974 1030 aaPredicted RBP16.06■□□□□ 0.16
CLTA-203ENST00000396603 PSTPIP1O43586 416 aa16.06■□□□□ 0.16
CLTA-203ENST00000396603 KRT86O43790 486 aa16.06■□□□□ 0.16
CLTA-203ENST00000396603 VIPP01282 170 aa16.06■□□□□ 0.16
CLTA-203ENST00000396603 CCDC175P0C221 793 aa16.06■□□□□ 0.16
CLTA-203ENST00000396603 GJC1P36383 396 aa16.06■□□□□ 0.16
CLTA-203ENST00000396603 TAS2R40P59535 323 aa16.06■□□□□ 0.16
CLTA-203ENST00000396603 ZBTB17Q13105 803 aa16.06■□□□□ 0.16
CLTA-203ENST00000396603 SEPT6Q14141 434 aa16.06■□□□□ 0.16
CLTA-203ENST00000396603 SNAP47Q5SQN1 464 aa16.06■□□□□ 0.16
CLTA-203ENST00000396603 ABRAXAS1Q6UWZ7 409 aa16.06■□□□□ 0.16
CLTA-203ENST00000396603 TIPARPQ7Z3E1 657 aaKnown RBP16.06■□□□□ 0.16
CLTA-203ENST00000396603 KDELC2Q7Z4H8 507 aa16.06■□□□□ 0.16
CLTA-203ENST00000396603 NT5DC3Q86UY8 548 aa16.06■□□□□ 0.16
CLTA-203ENST00000396603 LRRTM4Q86VH4 590 aa16.06■□□□□ 0.16
CLTA-203ENST00000396603 SYCE1Q8N0S2 351 aa16.06■□□□□ 0.16
CLTA-203ENST00000396603 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.06■□□□□ 0.16
CLTA-203ENST00000396603 C9orf43Q8TAL5 461 aaPredicted RBP16.06■□□□□ 0.16
CLTA-203ENST00000396603 STARD8Q92502 1023 aa16.06■□□□□ 0.16
CLTA-203ENST00000396603 EID2BQ96D98 161 aa16.06■□□□□ 0.16
CLTA-203ENST00000396603 OLFM3Q96PB7 478 aa16.06■□□□□ 0.16
CLTA-203ENST00000396603 OR2AG1Q9H205 316 aa16.06■□□□□ 0.16
CLTA-203ENST00000396603 ZNF768Q9H5H4 540 aaKnown RBP16.06■□□□□ 0.16
CLTA-203ENST00000396603 KLC4Q9NSK0 619 aa16.06■□□□□ 0.16
CLTA-203ENST00000396603 EPHA6Q9UF33 1036 aa16.06■□□□□ 0.16
CLTA-203ENST00000396603 REXO2Q9Y3B8 237 aaKnown RBP16.06■□□□□ 0.16
CLTA-203ENST00000396603 SNX2O60749 519 aa16.05■□□□□ 0.16
CLTA-203ENST00000396603 UBXN7O94888 489 aa16.05■□□□□ 0.16
CLTA-203ENST00000396603 VCLP18206 1134 aa16.05■□□□□ 0.16
CLTA-203ENST00000396603 TCN2P20062 427 aa16.05■□□□□ 0.16
CLTA-203ENST00000396603 COMTP21964 271 aa16.05■□□□□ 0.16
CLTA-203ENST00000396603 CDK18Q07002 472 aa16.05■□□□□ 0.16
CLTA-203ENST00000396603 INSCQ1MX18 579 aa16.05■□□□□ 0.16
CLTA-203ENST00000396603 ZDHHC20Q5W0Z9 365 aa16.05■□□□□ 0.16
CLTA-203ENST00000396603 PRSS42Q7Z5A4 293 aa16.05■□□□□ 0.16
CLTA-203ENST00000396603 ADGRG6Q86SQ4 1221 aa16.05■□□□□ 0.16
CLTA-203ENST00000396603 RNF10Q8N5U6 811 aaKnown RBP16.05■□□□□ 0.16
CLTA-203ENST00000396603 GPR26Q8NDV2 337 aa16.05■□□□□ 0.16
CLTA-203ENST00000396603 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.05■□□□□ 0.16
CLTA-203ENST00000396603 CTRCQ99895 268 aa16.05■□□□□ 0.16
CLTA-203ENST00000396603 DESI2Q9BSY9 194 aa16.05■□□□□ 0.16
CLTA-203ENST00000396603 TBC1D10AQ9BXI6 508 aa16.05■□□□□ 0.16
CLTA-203ENST00000396603 TRABDQ9H4I3 376 aa16.05■□□□□ 0.16
CLTA-203ENST00000396603 APMAPQ9HDC9 416 aa16.05■□□□□ 0.16
CLTA-203ENST00000396603 PRDM8Q9NQV8 689 aa16.05■□□□□ 0.16
CLTA-203ENST00000396603 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.05■□□□□ 0.16
CLTA-203ENST00000396603 ZNF711Q9Y462 761 aa16.05■□□□□ 0.16
CLTA-203ENST00000396603 PCDHB3Q9Y5E6 796 aa16.05■□□□□ 0.16
CLTA-203ENST00000396603 ALG6Q9Y672 507 aa16.05■□□□□ 0.16
CLTA-203ENST00000396603 APOL1O14791 398 aa16.04■□□□□ 0.16
CLTA-203ENST00000396603 NKX2-8O15522 239 aa16.04■□□□□ 0.16
CLTA-203ENST00000396603 ZNF7P17097 686 aaPredicted RBP16.04■□□□□ 0.16
CLTA-203ENST00000396603 MAPK9P45984 424 aa16.04■□□□□ 0.16
CLTA-203ENST00000396603 CAPZBP47756 277 aa16.04■□□□□ 0.16
CLTA-203ENST00000396603 GALNT3Q14435 633 aa16.04■□□□□ 0.16
CLTA-203ENST00000396603 CCDC70Q6NSX1 233 aa16.04■□□□□ 0.16
CLTA-203ENST00000396603 BZW1Q7L1Q6 419 aaKnown RBP16.04■□□□□ 0.16
CLTA-203ENST00000396603 TRIM48Q8IWZ4 208 aa16.04■□□□□ 0.16
CLTA-203ENST00000396603 BRSK1Q8TDC3 778 aa16.04■□□□□ 0.16
CLTA-203ENST00000396603 RAPGEF5Q92565 580 aa16.04■□□□□ 0.16
CLTA-203ENST00000396603 ZDHHC12Q96GR4 267 aa16.04■□□□□ 0.16
CLTA-203ENST00000396603 FCRL4Q96PJ5 515 aa16.04■□□□□ 0.16
CLTA-203ENST00000396603 MAK16Q9BXY0 300 aaKnown RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms