RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 WT1P19544 449 aaPredicted RBP18.04■□□□□ 0.48
FXN-203ENST00000396366 CSTF2P33240 577 aaKnown RBP eCLIP18.04■□□□□ 0.489e-8■■■■□ 22.8
FXN-203ENST00000396366 OTUD4Q01804 1114 aaKnown RBP18.04■□□□□ 0.48
FXN-203ENST00000396366 C19orf57Q0VDD7 668 aa18.04■□□□□ 0.48
FXN-203ENST00000396366 CHRNA6Q15825 494 aa18.04■□□□□ 0.48
FXN-203ENST00000396366 SEPT7Q16181 437 aaKnown RBP18.04■□□□□ 0.48
FXN-203ENST00000396366 INSCQ1MX18 579 aa18.04■□□□□ 0.48
FXN-203ENST00000396366 LRRTM4Q86VH4 590 aa18.04■□□□□ 0.48
FXN-203ENST00000396366 ZNF843Q8N446 348 aa18.04■□□□□ 0.48
FXN-203ENST00000396366 AGBL5Q8NDL9 886 aa18.04■□□□□ 0.48
FXN-203ENST00000396366 ACTL9Q8TC94 416 aa18.04■□□□□ 0.48
FXN-203ENST00000396366 ALG3Q92685 438 aa18.04■□□□□ 0.48
FXN-203ENST00000396366 ART4Q93070 314 aa18.04■□□□□ 0.48
FXN-203ENST00000396366 TAAR9Q96RI9 348 aa18.04■□□□□ 0.48
FXN-203ENST00000396366 LUC7LQ9NQ29 371 aaKnown RBP18.04■□□□□ 0.48
FXN-203ENST00000396366 IL17CQ9P0M4 197 aa18.04■□□□□ 0.48
FXN-203ENST00000396366 ZNF624Q9P2J8 865 aaPredicted RBP18.04■□□□□ 0.48
FXN-203ENST00000396366 TRIM10Q9UDY6 481 aa18.04■□□□□ 0.48
FXN-203ENST00000396366 KLHL3Q9UH77 587 aa18.04■□□□□ 0.48
FXN-203ENST00000396366 KIR2DS5A0A0G2JLQ3 304 aa18.03■□□□□ 0.48
FXN-203ENST00000396366 A0A0G2JNG1 304 aa18.03■□□□□ 0.48
FXN-203ENST00000396366 A0A0U1RQJ8 604 aa18.03■□□□□ 0.48
FXN-203ENST00000396366 KIR2DS3K7RE56 304 aa18.03■□□□□ 0.48
FXN-203ENST00000396366 KMOO15229 486 aa18.03■□□□□ 0.48
FXN-203ENST00000396366 RPL10P27635 214 aaKnown RBP18.03■□□□□ 0.48
FXN-203ENST00000396366 SLC19A1P41440 591 aa18.03■□□□□ 0.48
FXN-203ENST00000396366 CLCNKAP51800 687 aa18.03■□□□□ 0.48
FXN-203ENST00000396366 DRG2P55039 364 aaKnown RBP18.03■□□□□ 0.48
FXN-203ENST00000396366 UBE2IP63279 158 aaKnown RBP18.03■□□□□ 0.48
FXN-203ENST00000396366 TMEM115Q12893 351 aaPredicted RBP18.03■□□□□ 0.48
FXN-203ENST00000396366 MPP3Q13368 585 aa18.03■□□□□ 0.48
FXN-203ENST00000396366 XRCC4Q13426 336 aa18.03■□□□□ 0.48
FXN-203ENST00000396366 KIR2DS5Q14953 304 aa18.03■□□□□ 0.48
FXN-203ENST00000396366 MANEAQ5SRI9 462 aa18.03■□□□□ 0.48
FXN-203ENST00000396366 CCDC181Q5TID7 509 aa18.03■□□□□ 0.48
FXN-203ENST00000396366 TMEM164Q5U3C3 297 aa18.03■□□□□ 0.48
FXN-203ENST00000396366 WDR74Q6RFH5 385 aaPredicted RBP18.03■□□□□ 0.48
FXN-203ENST00000396366 FAM151BQ6UXP7 276 aa18.03■□□□□ 0.48
FXN-203ENST00000396366 C11orf96Q7Z7L8 435 aa18.03■□□□□ 0.48
FXN-203ENST00000396366 FAM129CQ86XR2 697 aa18.03■□□□□ 0.48
FXN-203ENST00000396366 GDAP1Q8TB36 358 aa18.03■□□□□ 0.48
FXN-203ENST00000396366 SH3KBP1Q96B97 665 aa18.03■□□□□ 0.48
FXN-203ENST00000396366 VPS35Q96QK1 796 aa18.03■□□□□ 0.48
FXN-203ENST00000396366 SRPK1Q96SB4 655 aaKnown RBP18.03■□□□□ 0.48
FXN-203ENST00000396366 APOL2Q9BQE5 337 aa18.03■□□□□ 0.48
FXN-203ENST00000396366 FICDQ9BVA6 458 aa18.03■□□□□ 0.48
FXN-203ENST00000396366 OSBPL8Q9BZF1 889 aa18.03■□□□□ 0.48
FXN-203ENST00000396366 SLC39A1Q9NY26 324 aa18.03■□□□□ 0.48
FXN-203ENST00000396366 TRHDEQ9UKU6 1024 aa18.03■□□□□ 0.48
FXN-203ENST00000396366 B3GALT1Q9Y5Z6 326 aa18.03■□□□□ 0.48
FXN-203ENST00000396366 MACROD2A1Z1Q3 448 aa18.02■□□□□ 0.48
FXN-203ENST00000396366 GRID2IPA4D2P6 1211 aa18.02■□□□□ 0.48
FXN-203ENST00000396366 PRR19A6NJB7 356 aa18.02■□□□□ 0.48
FXN-203ENST00000396366 GPR89AB7ZAQ6 455 aa18.02■□□□□ 0.48
FXN-203ENST00000396366 GAPDHSO14556 408 aaPredicted RBP18.02■□□□□ 0.48
FXN-203ENST00000396366 VEGFDO43915 354 aa18.02■□□□□ 0.48
FXN-203ENST00000396366 GPR89BP0CG08 455 aa18.02■□□□□ 0.48
FXN-203ENST00000396366 PYGMP11217 842 aa18.02■□□□□ 0.48
FXN-203ENST00000396366 BRAFP15056 766 aa18.02■□□□□ 0.48
FXN-203ENST00000396366 CTNNA2P26232 953 aa18.02■□□□□ 0.48
FXN-203ENST00000396366 COPS2P61201 443 aa18.02■□□□□ 0.48
FXN-203ENST00000396366 ANKS6Q68DC2 871 aa18.02■□□□□ 0.48
FXN-203ENST00000396366 GLT6D1Q7Z4J2 308 aa18.02■□□□□ 0.48
FXN-203ENST00000396366 ARHGAP22Q7Z5H3 698 aa18.02■□□□□ 0.48
FXN-203ENST00000396366 BMPERQ8N8U9 685 aa18.02■□□□□ 0.48
FXN-203ENST00000396366 LRRC57Q8N9N7 239 aa18.02■□□□□ 0.48
FXN-203ENST00000396366 CTRCQ99895 268 aa18.02■□□□□ 0.48
FXN-203ENST00000396366 DPYSL5Q9BPU6 564 aa18.02■□□□□ 0.48
FXN-203ENST00000396366 GBA3Q9H227 469 aa18.02■□□□□ 0.48
FXN-203ENST00000396366 TRABDQ9H4I3 376 aa18.02■□□□□ 0.48
FXN-203ENST00000396366 STN1Q9H668 368 aaKnown RBP18.02■□□□□ 0.48
FXN-203ENST00000396366 OGFRQ9NZT2 677 aa18.02■□□□□ 0.48
FXN-203ENST00000396366 KCTD3Q9Y597 815 aa18.02■□□□□ 0.48
FXN-203ENST00000396366 SLC30A1Q9Y6M5 507 aa18.02■□□□□ 0.48
FXN-203ENST00000396366 HELZ2Q9BYK8 2649 aaKnown RBP18.01■□□□□ 0.47
FXN-203ENST00000396366 OR5K4A6NMS3 321 aa18.01■□□□□ 0.47
FXN-203ENST00000396366 PDZK1P1A8MUH7 402 aa18.01■□□□□ 0.47
FXN-203ENST00000396366 PJA2O43164 708 aa18.01■□□□□ 0.47
FXN-203ENST00000396366 SLC2A4P14672 509 aa18.01■□□□□ 0.47
FXN-203ENST00000396366 TYRP1P17643 537 aa18.01■□□□□ 0.47
FXN-203ENST00000396366 XRCC1P18887 633 aaPredicted RBP18.01■□□□□ 0.47
FXN-203ENST00000396366 HLA-DPA1P20036 260 aa18.01■□□□□ 0.47
FXN-203ENST00000396366 SPAM1P38567 509 aa18.01■□□□□ 0.47
FXN-203ENST00000396366 TNNT3P45378 269 aaPredicted RBP18.01■□□□□ 0.47
FXN-203ENST00000396366 EIF3EP60228 445 aaKnown RBP18.01■□□□□ 0.47
FXN-203ENST00000396366 CYP4F2P78329 520 aa18.01■□□□□ 0.47
FXN-203ENST00000396366 ANKRD20A2Q5SQ80 823 aa18.01■□□□□ 0.47
FXN-203ENST00000396366 ANKRD20A1Q5TYW2 823 aa18.01■□□□□ 0.47
FXN-203ENST00000396366 ANKRD20A3Q5VUR7 823 aa18.01■□□□□ 0.47
FXN-203ENST00000396366 TRAPPC5Q8IUR0 188 aa18.01■□□□□ 0.47
FXN-203ENST00000396366 RASGEF1AQ8N9B8 481 aa18.01■□□□□ 0.47
FXN-203ENST00000396366 NAT14Q8WUY8 206 aa18.01■□□□□ 0.47
FXN-203ENST00000396366 NKD1Q969G9 470 aa18.01■□□□□ 0.47
FXN-203ENST00000396366 TIMM29Q9BSF4 260 aa18.01■□□□□ 0.47
FXN-203ENST00000396366 FSD1LQ9BXM9 530 aa18.01■□□□□ 0.47
FXN-203ENST00000396366 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.01■□□□□ 0.47
FXN-203ENST00000396366 B3GNT4Q9C0J1 378 aa18.01■□□□□ 0.47
FXN-203ENST00000396366 HACD3Q9P035 362 aa18.01■□□□□ 0.47
FXN-203ENST00000396366 WDR37Q9Y2I8 494 aa18.01■□□□□ 0.47
FXN-203ENST00000396366 PCDHB11Q9Y5F2 797 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms