RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 ULK4Q96C45 1275 aa19.65■□□□□ 0.74
SNCA-203ENST00000394986 MFSD3Q96ES6 412 aa19.65■□□□□ 0.74
SNCA-203ENST00000394986 TTC25Q96NG3 672 aa19.65■□□□□ 0.74
SNCA-203ENST00000394986 KIFC1Q9BW19 673 aa19.65■□□□□ 0.74
SNCA-203ENST00000394986 XAB2Q9HCS7 855 aaKnown RBP19.65■□□□□ 0.74
SNCA-203ENST00000394986 TREX1Q9NSU2 369 aa19.65■□□□□ 0.74
SNCA-203ENST00000394986 SOX13Q9UN79 622 aa19.65■□□□□ 0.74
SNCA-203ENST00000394986 EFCAB8A8MWE9 144 aa19.64■□□□□ 0.73
SNCA-203ENST00000394986 GPR89AB7ZAQ6 455 aa19.64■□□□□ 0.73
SNCA-203ENST00000394986 NOBOXO60393 691 aa19.64■□□□□ 0.73
SNCA-203ENST00000394986 BANF1O75531 89 aa19.64■□□□□ 0.73
SNCA-203ENST00000394986 EML2O95834 649 aa19.64■□□□□ 0.73
SNCA-203ENST00000394986 GPR89BP0CG08 455 aa19.64■□□□□ 0.73
SNCA-203ENST00000394986 MAGEA3P43357 314 aa19.64■□□□□ 0.73
SNCA-203ENST00000394986 PRAMEP78395 509 aa19.64■□□□□ 0.73
SNCA-203ENST00000394986 CKAP4Q07065 602 aaKnown RBP19.64■□□□□ 0.73
SNCA-203ENST00000394986 LRP8Q14114 963 aa19.64■□□□□ 0.73
SNCA-203ENST00000394986 NR0B2Q15466 257 aa19.64■□□□□ 0.73
SNCA-203ENST00000394986 DBN1Q16643 649 aa19.64■□□□□ 0.73
SNCA-203ENST00000394986 GPR33Q49SQ1 333 aa19.64■□□□□ 0.73
SNCA-203ENST00000394986 ARL10Q8N8L6 244 aa19.64■□□□□ 0.73
SNCA-203ENST00000394986 ZDHHC1Q8WTX9 485 aa19.64■□□□□ 0.73
SNCA-203ENST00000394986 SGF29Q96ES7 293 aa19.64■□□□□ 0.73
SNCA-203ENST00000394986 PWWP2AQ96N64 755 aa19.64■□□□□ 0.73
SNCA-203ENST00000394986 COPS8Q99627 209 aa19.64■□□□□ 0.73
SNCA-203ENST00000394986 ZCCHC2Q9C0B9 1178 aaKnown RBP19.64■□□□□ 0.73
SNCA-203ENST00000394986 KLC4Q9NSK0 619 aa19.64■□□□□ 0.73
SNCA-203ENST00000394986 DNAJC16Q9Y2G8 782 aa19.64■□□□□ 0.73
SNCA-203ENST00000394986 SNX24Q9Y343 169 aa19.64■□□□□ 0.73
SNCA-203ENST00000394986 MRFAP1Q9Y605 127 aa19.64■□□□□ 0.73
SNCA-203ENST00000394986 MED19A0JLT2 244 aaPredicted RBP19.63■□□□□ 0.73
SNCA-203ENST00000394986 CPED1A4D0V7 1026 aa19.63■□□□□ 0.73
SNCA-203ENST00000394986 KMOO15229 486 aa19.63■□□□□ 0.73
SNCA-203ENST00000394986 ZNF7P17097 686 aaPredicted RBP19.63■□□□□ 0.73
SNCA-203ENST00000394986 ACP1P24666 158 aa19.63■□□□□ 0.73
SNCA-203ENST00000394986 ACRV1P26436 265 aa19.63■□□□□ 0.73
SNCA-203ENST00000394986 PBLDP30039 288 aaPredicted RBP19.63■□□□□ 0.73
SNCA-203ENST00000394986 ITGA8P53708 1063 aa19.63■□□□□ 0.73
SNCA-203ENST00000394986 SEMA3AQ14563 771 aa19.63■□□□□ 0.73
SNCA-203ENST00000394986 WHAMMP3Q1A5X7 153 aa19.63■□□□□ 0.73
SNCA-203ENST00000394986 INSCQ1MX18 579 aa19.63■□□□□ 0.73
SNCA-203ENST00000394986 FNBP1LQ5T0N5 605 aa19.63■□□□□ 0.73
SNCA-203ENST00000394986 TMEM220Q6QAJ8 160 aa19.63■□□□□ 0.73
SNCA-203ENST00000394986 C11orf96Q7Z7L8 435 aa19.63■□□□□ 0.73
SNCA-203ENST00000394986 HOOK3Q86VS8 718 aa19.63■□□□□ 0.73
SNCA-203ENST00000394986 BEND7Q8N7W2 519 aaPredicted RBP19.63■□□□□ 0.73
SNCA-203ENST00000394986 OR4L1Q8NH43 312 aa19.63■□□□□ 0.73
SNCA-203ENST00000394986 DPH5Q9H2P9 285 aa19.63■□□□□ 0.73
SNCA-203ENST00000394986 MRM3Q9HC36 420 aaKnown RBP19.63■□□□□ 0.73
SNCA-203ENST00000394986 ZDHHC3Q9NYG2 299 aa19.63■□□□□ 0.73
SNCA-203ENST00000394986 TBC1D29Q9UFV1 150 aa19.63■□□□□ 0.73
SNCA-203ENST00000394986 APOBEC2Q9Y235 224 aaKnown RBP19.63■□□□□ 0.73
SNCA-203ENST00000394986 PLXNB3Q9ULL4 1909 aa19.63■□□□□ 0.73
SNCA-203ENST00000394986 PCNX2A6NKB5 2137 aa19.63■□□□□ 0.73
SNCA-203ENST00000394986 SDR42E2A6NKP2 422 aa19.62■□□□□ 0.73
SNCA-203ENST00000394986 CASC3O15234 703 aaKnown RBP19.62■□□□□ 0.73
SNCA-203ENST00000394986 SGTAO43765 313 aa19.62■□□□□ 0.73
SNCA-203ENST00000394986 SNX2O60749 519 aa19.62■□□□□ 0.73
SNCA-203ENST00000394986 RFPL3O75679 317 aa19.62■□□□□ 0.73
SNCA-203ENST00000394986 SEC31AO94979 1220 aaKnown RBP19.62■□□□□ 0.73
SNCA-203ENST00000394986 TOP3BO95985 862 aaKnown RBP19.62■□□□□ 0.73
SNCA-203ENST00000394986 TUBB4AP04350 444 aa19.62■□□□□ 0.73
SNCA-203ENST00000394986 ARNTP27540 789 aa19.62■□□□□ 0.73
SNCA-203ENST00000394986 RPL21P46778 160 aaKnown RBP19.62■□□□□ 0.73
SNCA-203ENST00000394986 MAZP56270 477 aaKnown RBP19.62■□□□□ 0.73
SNCA-203ENST00000394986 CLDN6P56747 220 aa19.62■□□□□ 0.73
SNCA-203ENST00000394986 MSS51Q4VC12 460 aa19.62■□□□□ 0.73
SNCA-203ENST00000394986 HIBCHQ6NVY1 386 aaPredicted RBP19.62■□□□□ 0.73
SNCA-203ENST00000394986 OGFOD3Q6PK18 319 aa19.62■□□□□ 0.73
SNCA-203ENST00000394986 EFL1Q7Z2Z2 1120 aaKnown RBP19.62■□□□□ 0.73
SNCA-203ENST00000394986 PCGF5Q86SE9 256 aa19.62■□□□□ 0.73
SNCA-203ENST00000394986 GPR156Q8NFN8 814 aa19.62■□□□□ 0.73
SNCA-203ENST00000394986 IFI44Q8TCB0 444 aa19.62■□□□□ 0.73
SNCA-203ENST00000394986 PEX13Q92968 403 aa19.62■□□□□ 0.73
SNCA-203ENST00000394986 GLMNQ92990 594 aa19.62■□□□□ 0.73
SNCA-203ENST00000394986 DCUN1D1Q96GG9 259 aa19.62■□□□□ 0.73
SNCA-203ENST00000394986 SNF8Q96H20 258 aa19.62■□□□□ 0.73
SNCA-203ENST00000394986 OSGEPL1Q9H4B0 414 aa19.62■□□□□ 0.73
SNCA-203ENST00000394986 SAMD15Q9P1V8 674 aa19.62■□□□□ 0.73
SNCA-203ENST00000394986 MARCH4Q9P2E8 410 aaPredicted RBP19.62■□□□□ 0.73
SNCA-203ENST00000394986 PADI4Q9UM07 663 aa19.62■□□□□ 0.73
SNCA-203ENST00000394986 IGLV3-16A0A075B6K0 115 aa19.61■□□□□ 0.73
SNCA-203ENST00000394986 TRBV23OR9-2A0A075B6M9 112 aa19.61■□□□□ 0.73
SNCA-203ENST00000394986 FAM187AA6NFU0 413 aa19.61■□□□□ 0.73
SNCA-203ENST00000394986 GOLGA8KD6RF30 607 aa19.61■□□□□ 0.73
SNCA-203ENST00000394986 GOLGA8TH3BQL2 631 aa19.61■□□□□ 0.73
SNCA-203ENST00000394986 TP73O15350 636 aa19.61■□□□□ 0.73
SNCA-203ENST00000394986 DKK1O94907 266 aa19.61■□□□□ 0.73
SNCA-203ENST00000394986 DHX9Q08211 1270 aaKnown RBP19.61■□□□□ 0.73
SNCA-203ENST00000394986 FOXC1Q12948 553 aa19.61■□□□□ 0.73
SNCA-203ENST00000394986 MORF4L2Q15014 288 aa19.61■□□□□ 0.73
SNCA-203ENST00000394986 PERM1Q5SV97 790 aa19.61■□□□□ 0.73
SNCA-203ENST00000394986 DHRS13Q6UX07 377 aa19.61■□□□□ 0.73
SNCA-203ENST00000394986 LDB1Q86U70 411 aaPredicted RBP19.61■□□□□ 0.73
SNCA-203ENST00000394986 NAGSQ8N159 534 aa19.61■□□□□ 0.73
SNCA-203ENST00000394986 KIF18AQ8NI77 898 aa19.61■□□□□ 0.73
SNCA-203ENST00000394986 SIGLEC10Q96LC7 697 aa19.61■□□□□ 0.73
SNCA-203ENST00000394986 FCRL3Q96P31 734 aaPredicted RBP19.61■□□□□ 0.73
SNCA-203ENST00000394986 TIMM29Q9BSF4 260 aa19.61■□□□□ 0.73
SNCA-203ENST00000394986 PRDM8Q9NQV8 689 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms