RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 TMEM199Q8N511 208 aa18.19■□□□□ 0.5
PCDHA1-202ENST00000394633 BRSK1Q8TDC3 778 aa18.19■□□□□ 0.5
PCDHA1-202ENST00000394633 ITFG2Q969R8 447 aa18.19■□□□□ 0.5
PCDHA1-202ENST00000394633 ABI2Q9NYB9 513 aaPredicted RBP18.19■□□□□ 0.5
PCDHA1-202ENST00000394633 PCDH10Q9P2E7 1040 aa18.19■□□□□ 0.5
PCDHA1-202ENST00000394633 ZNF639Q9UID6 485 aa18.19■□□□□ 0.5
PCDHA1-202ENST00000394633 ZNF225Q9UK10 706 aa18.19■□□□□ 0.5
PCDHA1-202ENST00000394633 SCML2Q9UQR0 700 aa18.19■□□□□ 0.5
PCDHA1-202ENST00000394633 FAM50BQ9Y247 325 aa18.19■□□□□ 0.5
PCDHA1-202ENST00000394633 CDC7O00311 574 aa18.18■□□□□ 0.5
PCDHA1-202ENST00000394633 LDLRP01130 860 aa18.18■□□□□ 0.5
PCDHA1-202ENST00000394633 HRH2P25021 359 aa18.18■□□□□ 0.5
PCDHA1-202ENST00000394633 AGTR2P50052 363 aa18.18■□□□□ 0.5
PCDHA1-202ENST00000394633 GRIK2Q13002 908 aa18.18■□□□□ 0.5
PCDHA1-202ENST00000394633 SERINC3Q13530 473 aa18.18■□□□□ 0.5
PCDHA1-202ENST00000394633 POLD3Q15054 466 aaPredicted RBP18.18■□□□□ 0.5
PCDHA1-202ENST00000394633 XKR7Q5GH72 579 aa18.18■□□□□ 0.5
PCDHA1-202ENST00000394633 KCTD8Q6ZWB6 473 aa18.18■□□□□ 0.5
PCDHA1-202ENST00000394633 LRRC8DQ7L1W4 858 aa18.18■□□□□ 0.5
PCDHA1-202ENST00000394633 OR2T11Q8NH01 316 aa18.18■□□□□ 0.5
PCDHA1-202ENST00000394633 SNRNP27Q8WVK2 155 aaKnown RBP18.18■□□□□ 0.5
PCDHA1-202ENST00000394633 FAM210AQ96ND0 272 aa18.18■□□□□ 0.5
PCDHA1-202ENST00000394633 BRINP2Q9C0B6 783 aa18.18■□□□□ 0.5
PCDHA1-202ENST00000394633 POLR1EQ9GZS1 481 aaKnown RBP18.18■□□□□ 0.5
PCDHA1-202ENST00000394633 NAA50Q9GZZ1 169 aaKnown RBP18.18■□□□□ 0.5
PCDHA1-202ENST00000394633 SYTL2Q9HCH5 934 aa18.18■□□□□ 0.5
PCDHA1-202ENST00000394633 INTS7Q9NVH2 962 aaKnown RBP18.18■□□□□ 0.5
PCDHA1-202ENST00000394633 CHCHD3Q9NX63 227 aaKnown RBP18.18■□□□□ 0.5
PCDHA1-202ENST00000394633 LEF1Q9UJU2 399 aaPredicted RBP18.18■□□□□ 0.5
PCDHA1-202ENST00000394633 V9GYQ6 96 aa18.18■□□□□ 0.5
PCDHA1-202ENST00000394633 LAMA3Q16787 3333 aa18.18■□□□□ 0.5
PCDHA1-202ENST00000394633 A0A1W2PPW3 197 aa18.18■□□□□ 0.5
PCDHA1-202ENST00000394633 CCDC154A6NI56 674 aa18.18■□□□□ 0.5
PCDHA1-202ENST00000394633 RAMP2O60895 175 aa18.18■□□□□ 0.5
PCDHA1-202ENST00000394633 NBNO60934 754 aa18.18■□□□□ 0.5
PCDHA1-202ENST00000394633 ZNF623O75123 536 aa18.18■□□□□ 0.5
PCDHA1-202ENST00000394633 SLC22A3O75751 556 aa18.18■□□□□ 0.5
PCDHA1-202ENST00000394633 IL12AP29459 219 aa18.18■□□□□ 0.5
PCDHA1-202ENST00000394633 FMO4P31512 558 aa18.18■□□□□ 0.5
PCDHA1-202ENST00000394633 TTKP33981 857 aa18.18■□□□□ 0.5
PCDHA1-202ENST00000394633 PBX3P40426 434 aa18.18■□□□□ 0.5
PCDHA1-202ENST00000394633 CASP2P42575 452 aa18.18■□□□□ 0.5
PCDHA1-202ENST00000394633 YAP1P46937 504 aaKnown RBP18.18■□□□□ 0.5
PCDHA1-202ENST00000394633 YWHAHQ04917 246 aaPredicted RBP18.18■□□□□ 0.5
PCDHA1-202ENST00000394633 EFEMP1Q12805 493 aa18.18■□□□□ 0.5
PCDHA1-202ENST00000394633 PLCL1Q15111 1095 aa18.18■□□□□ 0.5
PCDHA1-202ENST00000394633 ANKDD1AQ495B1 522 aa18.18■□□□□ 0.5
PCDHA1-202ENST00000394633 AARS2Q5JTZ9 985 aaKnown RBP18.18■□□□□ 0.5
PCDHA1-202ENST00000394633 NANOGP8Q6NSW7 305 aa18.18■□□□□ 0.5
PCDHA1-202ENST00000394633 MIPOL1Q8TD10 442 aa18.18■□□□□ 0.5
PCDHA1-202ENST00000394633 PPP1R14BQ96C90 147 aa18.18■□□□□ 0.5
PCDHA1-202ENST00000394633 BIRC7Q96CA5 298 aa18.18■□□□□ 0.5
PCDHA1-202ENST00000394633 CDKN2AIPNLQ96HQ2 116 aa18.18■□□□□ 0.5
PCDHA1-202ENST00000394633 VPS50Q96JG6 964 aa18.18■□□□□ 0.5
PCDHA1-202ENST00000394633 SEPHS2Q99611 448 aa18.18■□□□□ 0.5
PCDHA1-202ENST00000394633 C1orf50Q9BV19 199 aa18.18■□□□□ 0.5
PCDHA1-202ENST00000394633 NANOGQ9H9S0 305 aa18.18■□□□□ 0.5
PCDHA1-202ENST00000394633 FAIMQ9NVQ4 179 aa18.18■□□□□ 0.5
PCDHA1-202ENST00000394633 GMIPQ9P107 970 aa18.18■□□□□ 0.5
PCDHA1-202ENST00000394633 GREB1Q4ZG55 1949 aa18.18■□□□□ 0.5
PCDHA1-202ENST00000394633 KANSL1LA0AUZ9 987 aa18.17■□□□□ 0.5
PCDHA1-202ENST00000394633 LCHNA4D1U4 455 aa18.17■□□□□ 0.5
PCDHA1-202ENST00000394633 ENPP3O14638 875 aa18.17■□□□□ 0.5
PCDHA1-202ENST00000394633 TYMPP19971 482 aa18.17■□□□□ 0.5
PCDHA1-202ENST00000394633 HMOX2P30519 316 aa18.17■□□□□ 0.5
PCDHA1-202ENST00000394633 POLR2JP52435 117 aaKnown RBP18.17■□□□□ 0.5
PCDHA1-202ENST00000394633 DDR2Q16832 855 aa18.17■□□□□ 0.5
PCDHA1-202ENST00000394633 TIGD2Q4W5G0 525 aa18.17■□□□□ 0.5
PCDHA1-202ENST00000394633 UGT3A1Q6NUS8 523 aa18.17■□□□□ 0.5
PCDHA1-202ENST00000394633 CHST15Q7LFX5 561 aaPredicted RBP18.17■□□□□ 0.5
PCDHA1-202ENST00000394633 ZNF554Q86TJ5 538 aa18.17■□□□□ 0.5
PCDHA1-202ENST00000394633 FUBP1Q96AE4 644 aaKnown RBP18.17■□□□□ 0.5
PCDHA1-202ENST00000394633 NUSAP1Q9BXS6 441 aaKnown RBP18.17■□□□□ 0.5
PCDHA1-202ENST00000394633 PIF1Q9H611 641 aa18.17■□□□□ 0.5
PCDHA1-202ENST00000394633 GALPQ9UBC7 116 aa18.17■□□□□ 0.5
PCDHA1-202ENST00000394633 TYW5A2RUC4 315 aaKnown RBP18.17■□□□□ 0.5
PCDHA1-202ENST00000394633 NPEPPSL1A6NEC2 478 aa18.17■□□□□ 0.5
PCDHA1-202ENST00000394633 H0Y858 1186 aa18.17■□□□□ 0.5
PCDHA1-202ENST00000394633 CD247P20963 164 aa18.17■□□□□ 0.5
PCDHA1-202ENST00000394633 HTR1EP28566 365 aa18.17■□□□□ 0.5
PCDHA1-202ENST00000394633 OR4D2P58180 307 aa18.17■□□□□ 0.5
PCDHA1-202ENST00000394633 PDCD4Q53EL6 469 aaKnown RBP18.17■□□□□ 0.5
PCDHA1-202ENST00000394633 FGD3Q5JSP0 725 aa18.17■□□□□ 0.5
PCDHA1-202ENST00000394633 ATP6V0D2Q8N8Y2 350 aa18.17■□□□□ 0.5
PCDHA1-202ENST00000394633 SMYD1Q8NB12 490 aa18.17■□□□□ 0.5
PCDHA1-202ENST00000394633 THAP11Q96EK4 314 aa18.17■□□□□ 0.5
PCDHA1-202ENST00000394633 ACOX2Q99424 681 aa18.17■□□□□ 0.5
PCDHA1-202ENST00000394633 TLR9Q9NR96 1032 aa18.17■□□□□ 0.5
PCDHA1-202ENST00000394633 TAS2R13Q9NYV9 303 aa18.17■□□□□ 0.5
PCDHA1-202ENST00000394633 PCTPQ9UKL6 214 aa18.17■□□□□ 0.5
PCDHA1-202ENST00000394633 CHD5Q8TDI0 1954 aa18.16■□□□□ 0.5
PCDHA1-202ENST00000394633 TRIM64BA6NI03 449 aa18.16■□□□□ 0.5
PCDHA1-202ENST00000394633 NCF1BA6NI72 391 aaPredicted RBP18.16■□□□□ 0.5
PCDHA1-202ENST00000394633 NCF1CA8MVU1 366 aaPredicted RBP18.16■□□□□ 0.5
PCDHA1-202ENST00000394633 SNX2O60749 519 aa18.16■□□□□ 0.5
PCDHA1-202ENST00000394633 ESRRBO95718 433 aa18.16■□□□□ 0.5
PCDHA1-202ENST00000394633 TBX18O95935 607 aa18.16■□□□□ 0.5
PCDHA1-202ENST00000394633 UROSP10746 265 aa18.16■□□□□ 0.5
PCDHA1-202ENST00000394633 NCF1P14598 390 aaPredicted RBP18.16■□□□□ 0.5
PCDHA1-202ENST00000394633 SELPP16109 830 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms