RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 DRC3Q9H069 523 aa8.55□□□□□ -1.04
TDP1-203ENST00000393454 ILKAPQ9H0C8 392 aaPredicted RBP8.55□□□□□ -1.04
TDP1-203ENST00000393454 KDM4CQ9H3R0 1056 aa8.55□□□□□ -1.04
TDP1-203ENST00000393454 KCNK4Q9NYG8 393 aa8.55□□□□□ -1.04
TDP1-203ENST00000393454 HEY2Q9UBP5 337 aa8.55□□□□□ -1.04
TDP1-203ENST00000393454 PLXNB3Q9ULL4 1909 aa8.55□□□□□ -1.04
TDP1-203ENST00000393454 PIKFYVEQ9Y2I7 2098 aa8.54□□□□□ -1.04
TDP1-203ENST00000393454 MMP20O60882 483 aa8.54□□□□□ -1.04
TDP1-203ENST00000393454 KERAO60938 352 aa8.54□□□□□ -1.04
TDP1-203ENST00000393454 MTX2O75431 263 aa8.54□□□□□ -1.04
TDP1-203ENST00000393454 CHRNGP07510 517 aa8.54□□□□□ -1.04
TDP1-203ENST00000393454 OR56A5P0C7T3 313 aa8.54□□□□□ -1.04
TDP1-203ENST00000393454 HNRNPLP14866 589 aaKnown RBP eCLIP8.54□□□□□ -1.04
TDP1-203ENST00000393454 CTHP32929 405 aa8.54□□□□□ -1.04
TDP1-203ENST00000393454 RGS4P49798 205 aa8.54□□□□□ -1.04
TDP1-203ENST00000393454 DCDC1P59894 354 aa8.54□□□□□ -1.04
TDP1-203ENST00000393454 DNAJB13P59910 316 aa8.54□□□□□ -1.04
TDP1-203ENST00000393454 CNTN1Q12860 1018 aa8.54□□□□□ -1.04
TDP1-203ENST00000393454 TSNQ15631 228 aaKnown RBP8.54□□□□□ -1.04
TDP1-203ENST00000393454 PFKFB4Q16877 469 aa8.54□□□□□ -1.04
TDP1-203ENST00000393454 ARL13AQ5H913 290 aaPredicted RBP8.54□□□□□ -1.04
TDP1-203ENST00000393454 TXNDC11Q6PKC3 985 aa8.54□□□□□ -1.04
TDP1-203ENST00000393454 MACC1Q6ZN28 852 aa8.54□□□□□ -1.04
TDP1-203ENST00000393454 TECPR1Q7Z6L1 1165 aa8.54□□□□□ -1.04
TDP1-203ENST00000393454 MTDHQ86UE4 582 aaKnown RBP8.54□□□□□ -1.04
TDP1-203ENST00000393454 SUGP1Q8IWZ8 645 aaKnown RBP8.54□□□□□ -1.04
TDP1-203ENST00000393454 TRAM1L1Q8N609 369 aa8.54□□□□□ -1.04
TDP1-203ENST00000393454 ZBTB2Q8N680 514 aa8.54□□□□□ -1.04
TDP1-203ENST00000393454 FITM2Q8N6M3 262 aa8.54□□□□□ -1.04
TDP1-203ENST00000393454 PTGR2Q8N8N7 351 aaPredicted RBP8.54□□□□□ -1.04
TDP1-203ENST00000393454 RHEBL1Q8TAI7 183 aa8.54□□□□□ -1.04
TDP1-203ENST00000393454 CXorf40AQ8TE69 158 aa8.54□□□□□ -1.04
TDP1-203ENST00000393454 ZSCAN5AQ9BUG6 496 aa8.54□□□□□ -1.04
TDP1-203ENST00000393454 CDH19Q9H159 772 aa8.54□□□□□ -1.04
TDP1-203ENST00000393454 HEBP1Q9NRV9 189 aa8.54□□□□□ -1.04
TDP1-203ENST00000393454 SPATS2LQ9NUQ6 558 aaKnown RBP8.54□□□□□ -1.04
TDP1-203ENST00000393454 IKZF3Q9UKT9 509 aa8.54□□□□□ -1.04
TDP1-203ENST00000393454 TMPRSS11EQ9UL52 423 aa8.54□□□□□ -1.04
TDP1-203ENST00000393454 XIRP2A4UGR9 3374 aa8.54□□□□□ -1.04
TDP1-203ENST00000393454 A0A1W2PPC1 479 aa8.53□□□□□ -1.04
TDP1-203ENST00000393454 NCF1BA6NI72 391 aaPredicted RBP8.53□□□□□ -1.04
TDP1-203ENST00000393454 SYCE1LA8MT33 242 aa8.53□□□□□ -1.04
TDP1-203ENST00000393454 NCF1CA8MVU1 366 aaPredicted RBP8.53□□□□□ -1.04
TDP1-203ENST00000393454 CFAP99D6REC4 459 aa8.53□□□□□ -1.04
TDP1-203ENST00000393454 PSMD11O00231 422 aa8.53□□□□□ -1.04
TDP1-203ENST00000393454 NPC1O15118 1278 aa8.53□□□□□ -1.04
TDP1-203ENST00000393454 MID1O15344 667 aa8.53□□□□□ -1.04
TDP1-203ENST00000393454 SPINT1O43278 529 aa8.53□□□□□ -1.04
TDP1-203ENST00000393454 NPHS1O60500 1241 aa8.53□□□□□ -1.04
TDP1-203ENST00000393454 UBOX5O94941 541 aa8.53□□□□□ -1.04
TDP1-203ENST00000393454 NCF1P14598 390 aaPredicted RBP8.53□□□□□ -1.04
TDP1-203ENST00000393454 IMPDH1P20839 514 aa8.53□□□□□ -1.04
TDP1-203ENST00000393454 DGKAP23743 735 aa8.53□□□□□ -1.04
TDP1-203ENST00000393454 MPSTP25325 297 aa8.53□□□□□ -1.04
TDP1-203ENST00000393454 P2RY2P41231 377 aa8.53□□□□□ -1.04
TDP1-203ENST00000393454 B4GALNT1Q00973 533 aa8.53□□□□□ -1.04
TDP1-203ENST00000393454 ZNF648Q5T619 568 aaPredicted RBP8.53□□□□□ -1.04
TDP1-203ENST00000393454 HENMT1Q5T8I9 393 aaKnown RBP8.53□□□□□ -1.04
TDP1-203ENST00000393454 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.53□□□□□ -1.04
TDP1-203ENST00000393454 FRA10AC1Q70Z53 315 aa8.53□□□□□ -1.04
TDP1-203ENST00000393454 PIWIL4Q7Z3Z4 852 aaKnown RBP8.53□□□□□ -1.04
TDP1-203ENST00000393454 YTHDF3Q7Z739 585 aaKnown RBP8.53□□□□□ -1.04
TDP1-203ENST00000393454 GPSM1Q86YR5 675 aa8.53□□□□□ -1.04
TDP1-203ENST00000393454 NRSN1Q8IZ57 195 aa8.53□□□□□ -1.04
TDP1-203ENST00000393454 FBXO39Q8N4B4 442 aa8.53□□□□□ -1.04
TDP1-203ENST00000393454 GANCQ8TET4 914 aa8.53□□□□□ -1.04
TDP1-203ENST00000393454 ERP27Q96DN0 273 aa8.53□□□□□ -1.04
TDP1-203ENST00000393454 CNDP1Q96KN2 507 aa8.53□□□□□ -1.04
TDP1-203ENST00000393454 TMEM237Q96Q45 408 aa8.53□□□□□ -1.04
TDP1-203ENST00000393454 PANX3Q96QZ0 392 aa8.53□□□□□ -1.04
TDP1-203ENST00000393454 HDAC8Q9BY41 377 aa8.53□□□□□ -1.04
TDP1-203ENST00000393454 WWP1Q9H0M0 922 aa8.53□□□□□ -1.04
TDP1-203ENST00000393454 MYLK2Q9H1R3 596 aa8.53□□□□□ -1.04
TDP1-203ENST00000393454 UBE2ZQ9H832 354 aaPredicted RBP8.53□□□□□ -1.04
TDP1-203ENST00000393454 KCNK12Q9HB15 430 aa8.53□□□□□ -1.04
TDP1-203ENST00000393454 ZFP69BQ9UJL9 534 aa8.53□□□□□ -1.04
TDP1-203ENST00000393454 RAP2CQ9Y3L5 183 aa8.53□□□□□ -1.04
TDP1-203ENST00000393454 PIAS3Q9Y6X2 628 aa8.53□□□□□ -1.04
TDP1-203ENST00000393454 ANKRD12Q6UB98 2062 aa8.53□□□□□ -1.04
TDP1-203ENST00000393454 PLXNA2O75051 1894 aa8.53□□□□□ -1.04
TDP1-203ENST00000393454 ATXN2Q99700 1313 aaKnown RBP8.53□□□□□ -1.04
TDP1-203ENST00000393454 FADS2P1A8MWK0 482 aa8.53□□□□□ -1.04
TDP1-203ENST00000393454 H0Y858 1186 aa8.53□□□□□ -1.04
TDP1-203ENST00000393454 SOX1O00570 391 aaPredicted RBP8.53□□□□□ -1.04
TDP1-203ENST00000393454 AREL1O15033 823 aa8.53□□□□□ -1.04
TDP1-203ENST00000393454 INPP4BO15327 924 aa8.53□□□□□ -1.04
TDP1-203ENST00000393454 MBTPS2O43462 519 aa8.53□□□□□ -1.04
TDP1-203ENST00000393454 MAGEC1O60732 1142 aa8.53□□□□□ -1.04
TDP1-203ENST00000393454 SNX2O60749 519 aa8.53□□□□□ -1.04
TDP1-203ENST00000393454 DIAPH2O60879 1101 aa8.53□□□□□ -1.04
TDP1-203ENST00000393454 RECQL5O94762 991 aaPredicted RBP8.53□□□□□ -1.04
TDP1-203ENST00000393454 SUPT7LO94864 414 aa8.53□□□□□ -1.04
TDP1-203ENST00000393454 TSPAN12O95859 305 aa8.53□□□□□ -1.04
TDP1-203ENST00000393454 EGFP01133 1207 aa8.53□□□□□ -1.04
TDP1-203ENST00000393454 C6P13671 934 aa8.53□□□□□ -1.04
TDP1-203ENST00000393454 ATP1B2P14415 290 aaPredicted RBP8.53□□□□□ -1.04
TDP1-203ENST00000393454 SERPINB3P29508 390 aa8.53□□□□□ -1.04
TDP1-203ENST00000393454 KIR2DL1P43626 348 aaPredicted RBP8.53□□□□□ -1.04
TDP1-203ENST00000393454 RPL14P50914 215 aaKnown RBP8.53□□□□□ -1.04
TDP1-203ENST00000393454 SATB1Q01826 763 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms