RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 TRPC4APQ8TEL6 797 aa10.73□□□□□ -0.69
NEDD9-201ENST00000379433 GCNAQ96QF7 691 aa10.73□□□□□ -0.69
NEDD9-201ENST00000379433 TTLL2Q9BWV7 592 aa10.73□□□□□ -0.69
NEDD9-201ENST00000379433 CFHR5Q9BXR6 569 aa10.73□□□□□ -0.69
NEDD9-201ENST00000379433 SLC46A2Q9BY10 475 aa10.73□□□□□ -0.69
NEDD9-201ENST00000379433 CCDC167Q9P0B6 97 aa10.73□□□□□ -0.69
NEDD9-201ENST00000379433 NPEPPSL1A6NEC2 478 aa10.73□□□□□ -0.69
NEDD9-201ENST00000379433 A8MT66 165 aa10.73□□□□□ -0.69
NEDD9-201ENST00000379433 STX16-NPEPL1H3BU86 382 aa10.73□□□□□ -0.69
NEDD9-201ENST00000379433 PDLIM1O00151 329 aa10.73□□□□□ -0.69
NEDD9-201ENST00000379433 RPP40O75818 363 aaKnown RBP10.73□□□□□ -0.69
NEDD9-201ENST00000379433 PRLP01236 227 aa10.73□□□□□ -0.69
NEDD9-201ENST00000379433 HLA-DPA1P20036 260 aa10.73□□□□□ -0.69
NEDD9-201ENST00000379433 CRABP2P29373 138 aa10.73□□□□□ -0.69
NEDD9-201ENST00000379433 PBLDP30039 288 aaPredicted RBP10.73□□□□□ -0.69
NEDD9-201ENST00000379433 SEC13P55735 322 aa10.73□□□□□ -0.69
NEDD9-201ENST00000379433 POU4F1Q01851 419 aa10.73□□□□□ -0.69
NEDD9-201ENST00000379433 MSLNQ13421 630 aaPredicted RBP10.73□□□□□ -0.69
NEDD9-201ENST00000379433 TEAD2Q15562 447 aa10.73□□□□□ -0.69
NEDD9-201ENST00000379433 NECAB2Q7Z6G3 386 aa10.73□□□□□ -0.69
NEDD9-201ENST00000379433 CLEC14AQ86T13 490 aa10.73□□□□□ -0.69
NEDD9-201ENST00000379433 TSPAN33Q86UF1 283 aa10.73□□□□□ -0.69
NEDD9-201ENST00000379433 C7orf61Q8IZ16 206 aa10.73□□□□□ -0.69
NEDD9-201ENST00000379433 C2orf15Q8WU43 125 aaKnown RBP10.73□□□□□ -0.69
NEDD9-201ENST00000379433 CYB5D2Q8WUJ1 264 aa10.73□□□□□ -0.69
NEDD9-201ENST00000379433 PYDC1Q8WXC3 89 aa10.73□□□□□ -0.69
NEDD9-201ENST00000379433 ZFYVE19Q96K21 471 aa10.73□□□□□ -0.69
NEDD9-201ENST00000379433 CDK15Q96Q40 435 aa10.73□□□□□ -0.69
NEDD9-201ENST00000379433 PDFQ9HBH1 243 aa10.73□□□□□ -0.69
NEDD9-201ENST00000379433 TSC22D4Q9Y3Q8 395 aa10.73□□□□□ -0.69
NEDD9-201ENST00000379433 WNT6Q9Y6F9 365 aa10.73□□□□□ -0.69
NEDD9-201ENST00000379433 WDR87Q6ZQQ6 2873 aa10.73□□□□□ -0.69
NEDD9-201ENST00000379433 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.73□□□□□ -0.69
NEDD9-201ENST00000379433 LOC285095A0A1B0GVY8 99 aa10.73□□□□□ -0.69
NEDD9-201ENST00000379433 GPC4O75487 556 aa10.73□□□□□ -0.69
NEDD9-201ENST00000379433 LUC7L3O95232 432 aaKnown RBP10.73□□□□□ -0.69
NEDD9-201ENST00000379433 SERPINA6P08185 405 aa10.73□□□□□ -0.69
NEDD9-201ENST00000379433 AGTR2P50052 363 aa10.73□□□□□ -0.69
NEDD9-201ENST00000379433 GABREP78334 506 aa10.73□□□□□ -0.69
NEDD9-201ENST00000379433 RAB33AQ14088 237 aa10.73□□□□□ -0.69
NEDD9-201ENST00000379433 ACSBG2Q5FVE4 666 aa10.73□□□□□ -0.69
NEDD9-201ENST00000379433 RFLNAQ6ZTI6 216 aa10.73□□□□□ -0.69
NEDD9-201ENST00000379433 HPS6Q86YV9 775 aa10.73□□□□□ -0.69
NEDD9-201ENST00000379433 CPNE9Q8IYJ1 553 aa10.73□□□□□ -0.69
NEDD9-201ENST00000379433 TMEM151AQ8N4L1 468 aa10.73□□□□□ -0.69
NEDD9-201ENST00000379433 SLC26A7Q8TE54 656 aa10.73□□□□□ -0.69
NEDD9-201ENST00000379433 PLD4Q96BZ4 506 aa10.73□□□□□ -0.69
NEDD9-201ENST00000379433 GIMAP5Q96F15 307 aa10.73□□□□□ -0.69
NEDD9-201ENST00000379433 NAF1Q96HR8 494 aaKnown RBP10.73□□□□□ -0.69
NEDD9-201ENST00000379433 SERINC2Q96SA4 455 aa10.73□□□□□ -0.69
NEDD9-201ENST00000379433 CDK5RAP1Q96SZ6 601 aaKnown RBP10.73□□□□□ -0.69
NEDD9-201ENST00000379433 BOCQ9BWV1 1114 aa10.73□□□□□ -0.69
NEDD9-201ENST00000379433 BBS2Q9BXC9 721 aa10.73□□□□□ -0.69
NEDD9-201ENST00000379433 TDRD1Q9BXT4 1180 aaKnown RBP10.73□□□□□ -0.69
NEDD9-201ENST00000379433 ASAH2Q9NR71 780 aa10.73□□□□□ -0.69
NEDD9-201ENST00000379433 RNF112Q9ULX5 631 aa10.73□□□□□ -0.69
NEDD9-201ENST00000379433 SH3GLB1Q9Y371 365 aa10.73□□□□□ -0.69
NEDD9-201ENST00000379433 PKP3Q9Y446 797 aa10.73□□□□□ -0.69
NEDD9-201ENST00000379433 WASF2Q9Y6W5 498 aa10.73□□□□□ -0.69
NEDD9-201ENST00000379433 ILVBLA1L0T0 632 aa10.72□□□□□ -0.69
NEDD9-201ENST00000379433 KRT87PA6NCN2 255 aa10.72□□□□□ -0.69
NEDD9-201ENST00000379433 FGBP02675 491 aa10.72□□□□□ -0.69
NEDD9-201ENST00000379433 F11P03951 625 aa10.72□□□□□ -0.69
NEDD9-201ENST00000379433 RAC2P15153 192 aa10.72□□□□□ -0.69
NEDD9-201ENST00000379433 LMAN2Q12907 356 aa10.72□□□□□ -0.69
NEDD9-201ENST00000379433 C18orf21Q32NC0 220 aaPredicted RBP10.72□□□□□ -0.69
NEDD9-201ENST00000379433 TMC5Q6UXY8 1006 aa10.72□□□□□ -0.69
NEDD9-201ENST00000379433 RIPOR1Q6ZS17 1223 aa10.72□□□□□ -0.69
NEDD9-201ENST00000379433 PGBD3Q8N328 593 aa10.72□□□□□ -0.69
NEDD9-201ENST00000379433 TEX26Q8N6G2 289 aa10.72□□□□□ -0.69
NEDD9-201ENST00000379433 OR9I1Q8NGQ6 314 aa10.72□□□□□ -0.69
NEDD9-201ENST00000379433 ZNF398Q8TD17 642 aa10.72□□□□□ -0.69
NEDD9-201ENST00000379433 STYXQ8WUJ0 223 aa10.72□□□□□ -0.69
NEDD9-201ENST00000379433 POF1BQ8WVV4 589 aa10.72□□□□□ -0.69
NEDD9-201ENST00000379433 ZNF333Q96JL9 665 aa10.72□□□□□ -0.69
NEDD9-201ENST00000379433 ADGRE3Q9BY15 652 aa10.72□□□□□ -0.69
NEDD9-201ENST00000379433 MID1IP1Q9NPA3 183 aa10.72□□□□□ -0.69
NEDD9-201ENST00000379433 FNDC1Q4ZHG4 1894 aaPredicted RBP10.72□□□□□ -0.69
NEDD9-201ENST00000379433 TOR1BO14657 336 aa10.72□□□□□ -0.69
NEDD9-201ENST00000379433 UGT2B4P06133 528 aa10.72□□□□□ -0.69
NEDD9-201ENST00000379433 EPCAMP16422 314 aa10.72□□□□□ -0.69
NEDD9-201ENST00000379433 LPOP22079 712 aaPredicted RBP10.72□□□□□ -0.69
NEDD9-201ENST00000379433 PIK3CGP48736 1102 aa10.72□□□□□ -0.69
NEDD9-201ENST00000379433 NRG1Q02297 640 aaPredicted RBP10.72□□□□□ -0.69
NEDD9-201ENST00000379433 OR4D1Q15615 310 aa10.72□□□□□ -0.69
NEDD9-201ENST00000379433 TMEM95Q3KNT9 176 aa10.72□□□□□ -0.69
NEDD9-201ENST00000379433 TPGS2Q68CL5 300 aa10.72□□□□□ -0.69
NEDD9-201ENST00000379433 ACAD11Q709F0 780 aa10.72□□□□□ -0.69
NEDD9-201ENST00000379433 GRASPQ7Z6J2 395 aaPredicted RBP10.72□□□□□ -0.69
NEDD9-201ENST00000379433 ADAMTS19Q8TE59 1207 aa10.72□□□□□ -0.69
NEDD9-201ENST00000379433 FEM1CQ96JP0 617 aa10.72□□□□□ -0.69
NEDD9-201ENST00000379433 ZFRQ96KR1 1074 aaKnown RBP10.72□□□□□ -0.69
NEDD9-201ENST00000379433 GPR78Q96P69 363 aa10.72□□□□□ -0.69
NEDD9-201ENST00000379433 NPAS2Q99743 824 aa10.72□□□□□ -0.69
NEDD9-201ENST00000379433 MRPL57Q9BQC6 102 aaKnown RBP10.72□□□□□ -0.69
NEDD9-201ENST00000379433 MGME1Q9BQP7 344 aa10.72□□□□□ -0.69
NEDD9-201ENST00000379433 CDYLQ9Y232 598 aa10.72□□□□□ -0.69
NEDD9-201ENST00000379433 FRMPD3Q5JV73 1810 aa10.72□□□□□ -0.69
NEDD9-201ENST00000379433 A0A1B0GTL3 188 aa10.71□□□□□ -0.69
NEDD9-201ENST00000379433 LEFTY2O00292 366 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms