RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 SEZ6Q53EL9 994 aa11.15□□□□□ -0.62
PTCHD1-201ENST00000379361 EIF5AL1Q6IS14 154 aaKnown RBP11.15□□□□□ -0.62
PTCHD1-201ENST00000379361 MSANTD2Q6P1R3 559 aa11.15□□□□□ -0.62
PTCHD1-201ENST00000379361 PSRC1Q6PGN9 363 aaPredicted RBP11.15□□□□□ -0.62
PTCHD1-201ENST00000379361 PSKH2Q96QS6 385 aa11.15□□□□□ -0.62
PTCHD1-201ENST00000379361 SLC39A3Q9BRY0 314 aa11.15□□□□□ -0.62
PTCHD1-201ENST00000379361 NXF3Q9H4D5 531 aaKnown RBP11.15□□□□□ -0.62
PTCHD1-201ENST00000379361 FARSBQ9NSD9 589 aaKnown RBP11.15□□□□□ -0.62
PTCHD1-201ENST00000379361 KHKP50053 298 aa11.15□□□□□ -0.62
PTCHD1-201ENST00000379361 LACTB2Q53H82 288 aaPredicted RBP11.15□□□□□ -0.62
PTCHD1-201ENST00000379361 RBM23Q86U06 439 aaKnown RBP11.15□□□□□ -0.62
PTCHD1-201ENST00000379361 LCN9Q8WX39 176 aa11.15□□□□□ -0.62
PTCHD1-201ENST00000379361 ZYG11BQ9C0D3 744 aa11.15□□□□□ -0.62
PTCHD1-201ENST00000379361 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.15□□□□□ -0.62
PTCHD1-201ENST00000379361 IQGAP3Q86VI3 1631 aa11.15□□□□□ -0.62
PTCHD1-201ENST00000379361 SLC30A4O14863 429 aa11.15□□□□□ -0.62
PTCHD1-201ENST00000379361 ITGA2BP08514 1039 aa11.15□□□□□ -0.62
PTCHD1-201ENST00000379361 LAG3P18627 525 aa11.15□□□□□ -0.62
PTCHD1-201ENST00000379361 TYSND1Q2T9J0 566 aa11.15□□□□□ -0.62
PTCHD1-201ENST00000379361 SLC30A6Q6NXT4 461 aa11.15□□□□□ -0.62
PTCHD1-201ENST00000379361 CDC42EP4Q9H3Q1 356 aaKnown RBP11.15□□□□□ -0.62
PTCHD1-201ENST00000379361 PCDHB1Q9Y5F3 818 aa11.15□□□□□ -0.62
PTCHD1-201ENST00000379361 PROSCO94903 275 aa11.15□□□□□ -0.62
PTCHD1-201ENST00000379361 CEP97Q8IW35 865 aa11.15□□□□□ -0.62
PTCHD1-201ENST00000379361 OR52K1Q8NGK4 314 aa11.15□□□□□ -0.62
PTCHD1-201ENST00000379361 SMPDL3BQ92485 455 aa11.15□□□□□ -0.62
PTCHD1-201ENST00000379361 C1GALT1C1Q96EU7 318 aa11.15□□□□□ -0.62
PTCHD1-201ENST00000379361 LMLNQ96KR4 655 aa11.15□□□□□ -0.62
PTCHD1-201ENST00000379361 NR2E1Q9Y466 385 aa11.15□□□□□ -0.62
PTCHD1-201ENST00000379361 DDX3YO15523 660 aaKnown RBP11.15□□□□□ -0.62
PTCHD1-201ENST00000379361 MRPL49Q13405 166 aaKnown RBP11.15□□□□□ -0.62
PTCHD1-201ENST00000379361 CDK10Q15131 360 aa11.15□□□□□ -0.62
PTCHD1-201ENST00000379361 NBPF12Q5TAG4 269 aaPredicted RBP11.15□□□□□ -0.62
PTCHD1-201ENST00000379361 SLC29A4Q7RTT9 530 aa11.15□□□□□ -0.62
PTCHD1-201ENST00000379361 ARHGAP22Q7Z5H3 698 aa11.15□□□□□ -0.62
PTCHD1-201ENST00000379361 SAPCD2Q86UD0 394 aa11.15□□□□□ -0.62
PTCHD1-201ENST00000379361 SDR16C5Q8N3Y7 309 aa11.15□□□□□ -0.62
PTCHD1-201ENST00000379361 LINC00116Q8NCU8 138 aa11.15□□□□□ -0.62
PTCHD1-201ENST00000379361 ATXN2LQ8WWM7 1075 aaKnown RBP11.15□□□□□ -0.62
PTCHD1-201ENST00000379361 A0A0G2JMP0 313 aa11.15□□□□□ -0.62
PTCHD1-201ENST00000379361 GRIA4P48058 902 aa11.15□□□□□ -0.62
PTCHD1-201ENST00000379361 BNIP1Q12981 228 aa11.15□□□□□ -0.62
PTCHD1-201ENST00000379361 ZNF565Q8N9K5 539 aa11.15□□□□□ -0.62
PTCHD1-201ENST00000379361 OR4M2Q8NGB6 313 aa11.15□□□□□ -0.62
PTCHD1-201ENST00000379361 RIPOR3Q96MK2 946 aa11.15□□□□□ -0.62
PTCHD1-201ENST00000379361 CDRT15Q96T59 188 aa11.15□□□□□ -0.62
PTCHD1-201ENST00000379361 GAD1Q99259 594 aa11.15□□□□□ -0.62
PTCHD1-201ENST00000379361 DEC1Q9P2X7 70 aa11.15□□□□□ -0.62
PTCHD1-201ENST00000379361 PLEKHG4BQ96PX9 1271 aa11.15□□□□□ -0.62
PTCHD1-201ENST00000379361 RPL22P35268 128 aaKnown RBP11.15□□□□□ -0.62
PTCHD1-201ENST00000379361 FOXK1P85037 733 aa11.15□□□□□ -0.62
PTCHD1-201ENST00000379361 MAB21L3Q8N8X9 362 aa11.15□□□□□ -0.62
PTCHD1-201ENST00000379361 MCFD2Q8NI22 146 aa11.15□□□□□ -0.62
PTCHD1-201ENST00000379361 MUC13Q9H3R2 512 aa11.15□□□□□ -0.62
PTCHD1-201ENST00000379361 M0R036 132 aa11.15□□□□□ -0.63
PTCHD1-201ENST00000379361 LRATO95237 230 aa11.15□□□□□ -0.63
PTCHD1-201ENST00000379361 PGLSO95336 258 aa11.15□□□□□ -0.63
PTCHD1-201ENST00000379361 MT-ND5P03915 603 aa11.15□□□□□ -0.63
PTCHD1-201ENST00000379361 PCSK2P16519 638 aa11.15□□□□□ -0.63
PTCHD1-201ENST00000379361 PTENP60484 403 aa11.15□□□□□ -0.63
PTCHD1-201ENST00000379361 CLCA4Q14CN2 919 aa11.15□□□□□ -0.63
PTCHD1-201ENST00000379361 PGM5Q15124 567 aa11.15□□□□□ -0.63
PTCHD1-201ENST00000379361 SNAPC1Q16533 368 aa11.15□□□□□ -0.63
PTCHD1-201ENST00000379361 PLPP4Q5VZY2 271 aa11.15□□□□□ -0.63
PTCHD1-201ENST00000379361 CAND1Q86VP6 1230 aaKnown RBP11.15□□□□□ -0.63
PTCHD1-201ENST00000379361 RBM4BQ9BQ04 359 aaKnown RBP11.15□□□□□ -0.63
PTCHD1-201ENST00000379361 RBM4Q9BWF3 364 aaKnown RBP11.15□□□□□ -0.63
PTCHD1-201ENST00000379361 CFL2Q9Y281 166 aa11.15□□□□□ -0.63
PTCHD1-201ENST00000379361 UNC13BO14795 1591 aa11.15□□□□□ -0.63
PTCHD1-201ENST00000379361 PLCE1Q9P212 2302 aa11.15□□□□□ -0.63
PTCHD1-201ENST00000379361 ATP4AP20648 1035 aa11.15□□□□□ -0.63
PTCHD1-201ENST00000379361 ADRA1DP25100 572 aa11.15□□□□□ -0.63
PTCHD1-201ENST00000379361 MAGEA12P43365 314 aa11.15□□□□□ -0.63
PTCHD1-201ENST00000379361 TMEM63BQ5T3F8 832 aa11.15□□□□□ -0.63
PTCHD1-201ENST00000379361 DCLRE1AQ6PJP8 1040 aa11.15□□□□□ -0.63
PTCHD1-201ENST00000379361 AKAP14Q86UN6 197 aa11.15□□□□□ -0.63
PTCHD1-201ENST00000379361 FAM129CQ86XR2 697 aa11.15□□□□□ -0.63
PTCHD1-201ENST00000379361 KLK3P07288 261 aaPredicted RBP11.14□□□□□ -0.63
PTCHD1-201ENST00000379361 CD247P20963 164 aa11.14□□□□□ -0.63
PTCHD1-201ENST00000379361 ZNF613Q6PF04 617 aa11.14□□□□□ -0.63
PTCHD1-201ENST00000379361 PLET1Q6UQ28 207 aa11.14□□□□□ -0.63
PTCHD1-201ENST00000379361 RAB43Q86YS6 212 aa11.14□□□□□ -0.63
PTCHD1-201ENST00000379361 DGAT2Q96PD7 388 aa11.14□□□□□ -0.63
PTCHD1-201ENST00000379361 NIFKQ9BYG3 293 aaKnown RBP11.14□□□□□ -0.63
PTCHD1-201ENST00000379361 SAR1AQ9NR31 198 aa11.14□□□□□ -0.63
PTCHD1-201ENST00000379361 PNO1Q9NRX1 252 aaKnown RBP11.14□□□□□ -0.63
PTCHD1-201ENST00000379361 AGO1Q9UL18 857 aaKnown RBP11.14□□□□□ -0.63
PTCHD1-201ENST00000379361 KIAA1217Q5T5P2 1943 aa11.14□□□□□ -0.63
PTCHD1-201ENST00000379361 MED14O60244 1454 aa11.14□□□□□ -0.63
PTCHD1-201ENST00000379361 CSDE1O75534 798 aaKnown RBP11.14□□□□□ -0.63
PTCHD1-201ENST00000379361 SMIM10L2AP0DMW4 78 aa11.14□□□□□ -0.63
PTCHD1-201ENST00000379361 SMIM10L2BP0DMW5 78 aa11.14□□□□□ -0.63
PTCHD1-201ENST00000379361 PER3P56645 1201 aa11.14□□□□□ -0.63
PTCHD1-201ENST00000379361 EPHA10Q5JZY3 1008 aa11.14□□□□□ -0.63
PTCHD1-201ENST00000379361 FNBP1LQ5T0N5 605 aa11.14□□□□□ -0.63
PTCHD1-201ENST00000379361 DUS2Q9NX74 493 aaKnown RBP11.14□□□□□ -0.63
PTCHD1-201ENST00000379361 RIMKLBQ9ULI2 386 aa11.14□□□□□ -0.63
PTCHD1-201ENST00000379361 NEMP2A6NFY4 417 aa11.14□□□□□ -0.63
PTCHD1-201ENST00000379361 DNAJA2O60884 412 aa11.14□□□□□ -0.63
PTCHD1-201ENST00000379361 LGALS2P05162 132 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms