RNA–Protein interactions for RNA: ENST00000372736.3

COL9A2-201, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 319 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-201ENST00000372736 CLPPQ16740 277 aaPredicted RBP22.35■■□□□ 1.17
COL9A2-201ENST00000372736 INSCQ1MX18 579 aa22.35■■□□□ 1.17
COL9A2-201ENST00000372736 GPRC6AQ5T6X5 926 aa22.35■■□□□ 1.17
COL9A2-201ENST00000372736 FOXR1Q6PIV2 292 aa22.35■■□□□ 1.17
COL9A2-201ENST00000372736 RAB11FIP2Q7L804 512 aa22.35■■□□□ 1.17
COL9A2-201ENST00000372736 C11orf96Q7Z7L8 435 aa22.35■■□□□ 1.17
COL9A2-201ENST00000372736 ZNF761Q86XN6 746 aaPredicted RBP22.35■■□□□ 1.17
COL9A2-201ENST00000372736 FRMD8P1Q9BZ68 369 aaPredicted RBP22.35■■□□□ 1.17
COL9A2-201ENST00000372736 SEMA6CQ9H3T2 930 aa22.35■■□□□ 1.17
COL9A2-201ENST00000372736 OSGEPL1Q9H4B0 414 aa22.35■■□□□ 1.17
COL9A2-201ENST00000372736 SARS2Q9NP81 518 aaKnown RBP22.35■■□□□ 1.17
COL9A2-201ENST00000372736 PRDM8Q9NQV8 689 aa22.35■■□□□ 1.17
COL9A2-201ENST00000372736 FEZ2Q9UHY8 353 aaPredicted RBP22.35■■□□□ 1.17
COL9A2-201ENST00000372736 FKBPLQ9UIM3 349 aa22.35■■□□□ 1.17
COL9A2-201ENST00000372736 LHX6Q9UPM6 363 aa22.35■■□□□ 1.17
COL9A2-201ENST00000372736 PTPRQQ9UMZ3 2332 aa22.35■■□□□ 1.17
COL9A2-201ENST00000372736 ZW10O43264 779 aa22.34■■□□□ 1.17
COL9A2-201ENST00000372736 SLC2A4P14672 509 aa22.34■■□□□ 1.17
COL9A2-201ENST00000372736 RBMS1P29558 406 aaKnown RBP22.34■■□□□ 1.17
COL9A2-201ENST00000372736 MLLT3P42568 568 aaPredicted RBP22.34■■□□□ 1.17
COL9A2-201ENST00000372736 HHEXQ03014 270 aa22.34■■□□□ 1.17
COL9A2-201ENST00000372736 LDLRAP1Q5SW96 308 aa22.34■■□□□ 1.17
COL9A2-201ENST00000372736 NKAIN2Q5VXU1 208 aa22.34■■□□□ 1.17
COL9A2-201ENST00000372736 ZNF574Q6ZN55 896 aaPredicted RBP22.34■■□□□ 1.17
COL9A2-201ENST00000372736 PIM3Q86V86 326 aa22.34■■□□□ 1.17
COL9A2-201ENST00000372736 TRAPPC5Q8IUR0 188 aa22.34■■□□□ 1.17
COL9A2-201ENST00000372736 OR13C4Q8NGS5 318 aa22.34■■□□□ 1.17
COL9A2-201ENST00000372736 LRRC40Q9H9A6 602 aa22.34■■□□□ 1.17
COL9A2-201ENST00000372736 GRPEL1Q9HAV7 217 aa22.34■■□□□ 1.17
COL9A2-201ENST00000372736 KCNK4Q9NYG8 393 aa22.34■■□□□ 1.17
COL9A2-201ENST00000372736 RALYQ9UKM9 306 aaKnown RBP22.34■■□□□ 1.17
COL9A2-201ENST00000372736 DNAJC16Q9Y2G8 782 aa22.34■■□□□ 1.17
COL9A2-201ENST00000372736 PPP2R2CQ9Y2T4 447 aa22.34■■□□□ 1.17
COL9A2-201ENST00000372736 KIR2DS5A0A0G2JLQ3 304 aa22.33■■□□□ 1.17
COL9A2-201ENST00000372736 A0A0G2JNG1 304 aa22.33■■□□□ 1.17
COL9A2-201ENST00000372736 KIR2DS3K7RE56 304 aa22.33■■□□□ 1.17
COL9A2-201ENST00000372736 RRP8O43159 456 aaKnown RBP22.33■■□□□ 1.17
COL9A2-201ENST00000372736 TNFSF15O95150 251 aa22.33■■□□□ 1.17
COL9A2-201ENST00000372736 CRTAMO95727 393 aa22.33■■□□□ 1.17
COL9A2-201ENST00000372736 AP2A1O95782 977 aa22.33■■□□□ 1.17
COL9A2-201ENST00000372736 ITGA2BP08514 1039 aa22.33■■□□□ 1.17
COL9A2-201ENST00000372736 HGFP14210 728 aa22.33■■□□□ 1.17
COL9A2-201ENST00000372736 ITPKBP27987 946 aa22.33■■□□□ 1.17
COL9A2-201ENST00000372736 SQSTM1Q13501 440 aa22.33■■□□□ 1.17
COL9A2-201ENST00000372736 GTF2H3Q13889 308 aa22.33■■□□□ 1.17
COL9A2-201ENST00000372736 KIR2DS5Q14953 304 aa22.33■■□□□ 1.17
COL9A2-201ENST00000372736 SIX1Q15475 284 aaPredicted RBP22.33■■□□□ 1.17
COL9A2-201ENST00000372736 USP53Q70EK8 1073 aa22.33■■□□□ 1.17
COL9A2-201ENST00000372736 CLEC14AQ86T13 490 aa22.33■■□□□ 1.17
COL9A2-201ENST00000372736 FBXO39Q8N4B4 442 aa22.33■■□□□ 1.17
COL9A2-201ENST00000372736 RASGEF1AQ8N9B8 481 aa22.33■■□□□ 1.17
COL9A2-201ENST00000372736 TRIM58Q8NG06 486 aa22.33■■□□□ 1.17
COL9A2-201ENST00000372736 C1orf54Q8WWF1 131 aa22.33■■□□□ 1.17
COL9A2-201ENST00000372736 LRRC45Q96CN5 670 aa22.33■■□□□ 1.17
COL9A2-201ENST00000372736 TLR10Q9BXR5 811 aa22.33■■□□□ 1.17
COL9A2-201ENST00000372736 ZCCHC2Q9C0B9 1178 aaKnown RBP22.33■■□□□ 1.17
COL9A2-201ENST00000372736 SCHIP1Q9P0W5 487 aaPredicted RBP22.33■■□□□ 1.17
COL9A2-201ENST00000372736 LOXL2Q9Y4K0 774 aa22.33■■□□□ 1.17
COL9A2-201ENST00000372736 LDB2O43679 373 aa22.32■■□□□ 1.16
COL9A2-201ENST00000372736 SRP72O76094 671 aaKnown RBP22.32■■□□□ 1.16
COL9A2-201ENST00000372736 ABCG1P45844 678 aa22.32■■□□□ 1.16
COL9A2-201ENST00000372736 CTSCP53634 463 aa22.32■■□□□ 1.16
COL9A2-201ENST00000372736 UBE2IP63279 158 aaKnown RBP22.32■■□□□ 1.16
COL9A2-201ENST00000372736 GPLD1P80108 840 aa22.32■■□□□ 1.16
COL9A2-201ENST00000372736 XIAPP98170 497 aa22.32■■□□□ 1.16
COL9A2-201ENST00000372736 PDE1BQ01064 536 aa22.32■■□□□ 1.16
COL9A2-201ENST00000372736 CFHR1Q03591 330 aa22.32■■□□□ 1.16
COL9A2-201ENST00000372736 CCDC173Q0VFZ6 552 aa22.32■■□□□ 1.16
COL9A2-201ENST00000372736 PHF19Q5T6S3 580 aa22.32■■□□□ 1.16
COL9A2-201ENST00000372736 SLC9B2Q86UD5 537 aa22.32■■□□□ 1.16
COL9A2-201ENST00000372736 TAB3Q8N5C8 712 aaPredicted RBP22.32■■□□□ 1.16
COL9A2-201ENST00000372736 ZNF248Q8NDW4 579 aa22.32■■□□□ 1.16
COL9A2-201ENST00000372736 ZNF398Q8TD17 642 aa22.32■■□□□ 1.16
COL9A2-201ENST00000372736 CRELD1Q96HD1 420 aa22.32■■□□□ 1.16
COL9A2-201ENST00000372736 SLC38A3Q99624 504 aa22.32■■□□□ 1.16
COL9A2-201ENST00000372736 C19orf43Q9BQ61 176 aa22.32■■□□□ 1.16
COL9A2-201ENST00000372736 CPNE7Q9UBL6 633 aa22.32■■□□□ 1.16
COL9A2-201ENST00000372736 IGHV5-10-1A0A0J9YXX1 117 aa22.31■■□□□ 1.16
COL9A2-201ENST00000372736 OR5K4A6NMS3 321 aa22.31■■□□□ 1.16
COL9A2-201ENST00000372736 NRDCO43847 1150 aa22.31■■□□□ 1.16
COL9A2-201ENST00000372736 HOXB3P14651 431 aaPredicted RBP22.31■■□□□ 1.16
COL9A2-201ENST00000372736 STIP1P31948 543 aaKnown RBP22.31■■□□□ 1.16
COL9A2-201ENST00000372736 NFATC2Q13469 925 aa22.31■■□□□ 1.16
COL9A2-201ENST00000372736 C16orf72Q14CZ0 275 aa22.31■■□□□ 1.16
COL9A2-201ENST00000372736 LRRC69Q6ZNQ3 347 aa22.31■■□□□ 1.16
COL9A2-201ENST00000372736 SPACA3Q8IXA5 215 aa22.31■■□□□ 1.16
COL9A2-201ENST00000372736 OR4D9Q8NGE8 314 aa22.31■■□□□ 1.16
COL9A2-201ENST00000372736 TMEM159Q96B96 161 aa22.31■■□□□ 1.16
COL9A2-201ENST00000372736 CCDC74BQ96LY2 380 aa22.31■■□□□ 1.16
COL9A2-201ENST00000372736 TTC25Q96NG3 672 aa22.31■■□□□ 1.16
COL9A2-201ENST00000372736 STN1Q9H668 368 aaKnown RBP22.31■■□□□ 1.16
COL9A2-201ENST00000372736 AGAP14A8MT82 685 aa22.3■■□□□ 1.16
COL9A2-201ENST00000372736 BRAFP15056 766 aa22.3■■□□□ 1.16
COL9A2-201ENST00000372736 LIMK2P53671 638 aa22.3■■□□□ 1.16
COL9A2-201ENST00000372736 SNX1Q13596 522 aa22.3■■□□□ 1.16
COL9A2-201ENST00000372736 SEPT7Q16181 437 aaKnown RBP22.3■■□□□ 1.16
COL9A2-201ENST00000372736 AVL9Q8NBF6 648 aa22.3■■□□□ 1.16
COL9A2-201ENST00000372736 DNAJC1Q96KC8 554 aaKnown RBP22.3■■□□□ 1.16
COL9A2-201ENST00000372736 ASB8Q9H765 288 aa22.3■■□□□ 1.16
COL9A2-201ENST00000372736 PIH1D1Q9NWS0 290 aaKnown RBP22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms