RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 COG4Q9H9E3 785 aa17.33■□□□□ 0.37
SSBP3-203ENST00000371319 ZDHHC4Q9NPG8 344 aa17.33■□□□□ 0.37
SSBP3-203ENST00000371319 PRSS16Q9NQE7 514 aa17.33■□□□□ 0.37
SSBP3-203ENST00000371319 RAD18Q9NS91 495 aa17.33■□□□□ 0.37
SSBP3-203ENST00000371319 SMOXQ9NWM0 555 aa17.33■□□□□ 0.37
SSBP3-203ENST00000371319 CCDC189A1A4V9 331 aa17.32■□□□□ 0.36
SSBP3-203ENST00000371319 RGSL1A5PLK6 1076 aa17.32■□□□□ 0.36
SSBP3-203ENST00000371319 KLK8O60259 260 aa17.32■□□□□ 0.36
SSBP3-203ENST00000371319 SLC25A14O95258 325 aaPredicted RBP17.32■□□□□ 0.36
SSBP3-203ENST00000371319 APODP05090 189 aa17.32■□□□□ 0.36
SSBP3-203ENST00000371319 HNRNPLP14866 589 aaKnown RBP eCLIP17.32■□□□□ 0.363e-24■■■■■ 36.5
SSBP3-203ENST00000371319 SOX9P48436 509 aa17.32■□□□□ 0.36
SSBP3-203ENST00000371319 HERVK_113P63132 956 aa17.32■□□□□ 0.36
SSBP3-203ENST00000371319 HTR4Q13639 388 aa17.32■□□□□ 0.36
SSBP3-203ENST00000371319 GRIN2CQ14957 1233 aa17.32■□□□□ 0.36
SSBP3-203ENST00000371319 GPRC6AQ5T6X5 926 aa17.32■□□□□ 0.36
SSBP3-203ENST00000371319 HENMT1Q5T8I9 393 aaKnown RBP17.32■□□□□ 0.36
SSBP3-203ENST00000371319 CHRDL2Q6WN34 429 aa17.32■□□□□ 0.36
SSBP3-203ENST00000371319 MTSS1LQ765P7 747 aa17.32■□□□□ 0.36
SSBP3-203ENST00000371319 TRAM1L1Q8N609 369 aa17.32■□□□□ 0.36
SSBP3-203ENST00000371319 AGR3Q8TD06 166 aa17.32■□□□□ 0.36
SSBP3-203ENST00000371319 SUSD6Q92537 303 aa17.32■□□□□ 0.36
SSBP3-203ENST00000371319 SCAMP4Q969E2 229 aa17.32■□□□□ 0.36
SSBP3-203ENST00000371319 RILPQ96NA2 401 aa17.32■□□□□ 0.36
SSBP3-203ENST00000371319 ERVK-6Q9BXR3 956 aa17.32■□□□□ 0.36
SSBP3-203ENST00000371319 TTYH1Q9H313 450 aaPredicted RBP17.32■□□□□ 0.36
SSBP3-203ENST00000371319 FBRSL1Q9HCM7 1045 aaKnown RBP17.32■□□□□ 0.36
SSBP3-203ENST00000371319 SAR1AQ9NR31 198 aa17.32■□□□□ 0.36
SSBP3-203ENST00000371319 LATS2Q9NRM7 1088 aa17.32■□□□□ 0.36
SSBP3-203ENST00000371319 SUN2Q9UH99 717 aa17.32■□□□□ 0.36
SSBP3-203ENST00000371319 LAMA3Q16787 3333 aa17.32■□□□□ 0.36
SSBP3-203ENST00000371319 COL4A2P08572 1712 aa17.32■□□□□ 0.36
SSBP3-203ENST00000371319 SUPT3HB4E1H0 165 aa17.32■□□□□ 0.36
SSBP3-203ENST00000371319 ANHXE9PGG2 379 aa17.32■□□□□ 0.36
SSBP3-203ENST00000371319 PLK4O00444 970 aa17.32■□□□□ 0.36
SSBP3-203ENST00000371319 SUPT3HO75486 399 aa17.32■□□□□ 0.36
SSBP3-203ENST00000371319 UNC5CO95185 931 aa17.32■□□□□ 0.36
SSBP3-203ENST00000371319 TRIM16O95361 564 aa17.32■□□□□ 0.36
SSBP3-203ENST00000371319 HK3P52790 923 aa17.32■□□□□ 0.36
SSBP3-203ENST00000371319 GALNT1Q10472 559 aaPredicted RBP17.32■□□□□ 0.36
SSBP3-203ENST00000371319 ADGRE1Q14246 886 aa17.32■□□□□ 0.36
SSBP3-203ENST00000371319 KRT72Q14CN4 511 aa17.32■□□□□ 0.36
SSBP3-203ENST00000371319 PREPLQ4J6C6 727 aaPredicted RBP17.32■□□□□ 0.36
SSBP3-203ENST00000371319 SLC9B1Q4ZJI4 515 aa17.32■□□□□ 0.36
SSBP3-203ENST00000371319 ZBTB2Q8N680 514 aa17.32■□□□□ 0.36
SSBP3-203ENST00000371319 SMRP1Q8NCR6 262 aa17.32■□□□□ 0.36
SSBP3-203ENST00000371319 COQ10AQ96MF6 247 aa17.32■□□□□ 0.36
SSBP3-203ENST00000371319 RIOK2Q9BVS4 552 aaKnown RBP17.32■□□□□ 0.36
SSBP3-203ENST00000371319 TXLNGQ9NUQ3 528 aa17.32■□□□□ 0.36
SSBP3-203ENST00000371319 ARL8BQ9NVJ2 186 aa17.32■□□□□ 0.36
SSBP3-203ENST00000371319 CACNA2D2Q9NY47 1150 aa17.32■□□□□ 0.36
SSBP3-203ENST00000371319 APOBEC2Q9Y235 224 aaKnown RBP17.32■□□□□ 0.36
SSBP3-203ENST00000371319 LRRC14BA6NHZ5 514 aa17.31■□□□□ 0.36
SSBP3-203ENST00000371319 SYCE1LA8MT33 242 aa17.31■□□□□ 0.36
SSBP3-203ENST00000371319 FADS2P1A8MWK0 482 aa17.31■□□□□ 0.36
SSBP3-203ENST00000371319 PSMD11O00231 422 aa17.31■□□□□ 0.36
SSBP3-203ENST00000371319 AREL1O15033 823 aa17.31■□□□□ 0.36
SSBP3-203ENST00000371319 HDAC3O15379 428 aa17.31■□□□□ 0.36
SSBP3-203ENST00000371319 CCDC22O60826 627 aa17.31■□□□□ 0.36
SSBP3-203ENST00000371319 CBX6O95503 412 aa17.31■□□□□ 0.36
SSBP3-203ENST00000371319 SERPINA6P08185 405 aa17.31■□□□□ 0.36
SSBP3-203ENST00000371319 ELFN1P0C7U0 828 aa17.31■□□□□ 0.36
SSBP3-203ENST00000371319 TARSP26639 723 aaKnown RBP17.31■□□□□ 0.36
SSBP3-203ENST00000371319 ENPP2Q13822 863 aa17.31■□□□□ 0.36
SSBP3-203ENST00000371319 PFKFB4Q16877 469 aa17.31■□□□□ 0.36
SSBP3-203ENST00000371319 ACSBG2Q5FVE4 666 aa17.31■□□□□ 0.36
SSBP3-203ENST00000371319 SEL1L3Q68CR1 1132 aa17.31■□□□□ 0.36
SSBP3-203ENST00000371319 ASRGL1Q7L266 308 aa17.31■□□□□ 0.36
SSBP3-203ENST00000371319 RAB44Q7Z6P3 723 aaPredicted RBP17.31■□□□□ 0.36
SSBP3-203ENST00000371319 NRSN1Q8IZ57 195 aa17.31■□□□□ 0.36
SSBP3-203ENST00000371319 FBXO39Q8N4B4 442 aa17.31■□□□□ 0.36
SSBP3-203ENST00000371319 STON2Q8WXE9 905 aa17.31■□□□□ 0.36
SSBP3-203ENST00000371319 TRMOQ9BU70 441 aa17.31■□□□□ 0.36
SSBP3-203ENST00000371319 TNFRSF12AQ9NP84 129 aa17.31■□□□□ 0.36
SSBP3-203ENST00000371319 SPATS2LQ9NUQ6 558 aaKnown RBP17.31■□□□□ 0.36
SSBP3-203ENST00000371319 VTI1BQ9UEU0 232 aa17.31■□□□□ 0.36
SSBP3-203ENST00000371319 MBD1Q9UIS9 605 aaPredicted RBP17.31■□□□□ 0.36
SSBP3-203ENST00000371319 TRIM33Q9UPN9 1127 aa17.31■□□□□ 0.36
SSBP3-203ENST00000371319 CAPN7Q9Y6W3 813 aa17.31■□□□□ 0.36
SSBP3-203ENST00000371319 PIKFYVEQ9Y2I7 2098 aa17.31■□□□□ 0.36
SSBP3-203ENST00000371319 CAPN14A8MX76 684 aa17.3■□□□□ 0.36
SSBP3-203ENST00000371319 TMEM233B4DJY2 109 aa17.3■□□□□ 0.36
SSBP3-203ENST00000371319 SLCO1B7G3V0H7 640 aa17.3■□□□□ 0.36
SSBP3-203ENST00000371319 UBFD1O14562 309 aaKnown RBP17.3■□□□□ 0.36
SSBP3-203ENST00000371319 DIAPH2O60879 1101 aa17.3■□□□□ 0.36
SSBP3-203ENST00000371319 ATP5HO75947 161 aa17.3■□□□□ 0.36
SSBP3-203ENST00000371319 SIX3O95343 332 aaPredicted RBP17.3■□□□□ 0.36
SSBP3-203ENST00000371319 EPHX1P07099 455 aa17.3■□□□□ 0.36
SSBP3-203ENST00000371319 ADRB3P13945 408 aa17.3■□□□□ 0.36
SSBP3-203ENST00000371319 GFAPP14136 432 aa17.3■□□□□ 0.36
SSBP3-203ENST00000371319 GALK1P51570 392 aa17.3■□□□□ 0.36
SSBP3-203ENST00000371319 ACOX1Q15067 660 aa17.3■□□□□ 0.36
SSBP3-203ENST00000371319 SH2D4BQ5SQS7 431 aa17.3■□□□□ 0.36
SSBP3-203ENST00000371319 FBXL19Q6PCT2 694 aa17.3■□□□□ 0.36
SSBP3-203ENST00000371319 CUZD1Q86UP6 607 aa17.3■□□□□ 0.36
SSBP3-203ENST00000371319 MMAAQ8IVH4 418 aaKnown RBP17.3■□□□□ 0.36
SSBP3-203ENST00000371319 PTCD3Q96EY7 689 aaKnown RBP17.3■□□□□ 0.36
SSBP3-203ENST00000371319 PPP1R16AQ96I34 528 aa17.3■□□□□ 0.36
SSBP3-203ENST00000371319 NECTIN4Q96NY8 510 aa17.3■□□□□ 0.36
SSBP3-203ENST00000371319 WRAP53Q9BUR4 548 aaKnown RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms