RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 ACTN2P35609 894 aa20.25■□□□□ 0.83
SMNDC1-201ENST00000369592 MLLT3P42568 568 aaPredicted RBP20.25■□□□□ 0.83
SMNDC1-201ENST00000369592 INHBCP55103 352 aa20.25■□□□□ 0.83
SMNDC1-201ENST00000369592 P3H1Q32P28 736 aa20.25■□□□□ 0.83
SMNDC1-201ENST00000369592 SEL1L2Q5TEA6 688 aa20.25■□□□□ 0.83
SMNDC1-201ENST00000369592 ARHGEF18Q6ZSZ5 1173 aa20.25■□□□□ 0.83
SMNDC1-201ENST00000369592 LRRTM4Q86VH4 590 aa20.25■□□□□ 0.83
SMNDC1-201ENST00000369592 OR4K2Q8NGD2 314 aa20.25■□□□□ 0.83
SMNDC1-201ENST00000369592 TMEM74Q96NL1 305 aa20.25■□□□□ 0.83
SMNDC1-201ENST00000369592 FOXP3Q9BZS1 431 aa20.25■□□□□ 0.83
SMNDC1-201ENST00000369592 SARS2Q9NP81 518 aaKnown RBP20.25■□□□□ 0.83
SMNDC1-201ENST00000369592 ASH1LQ9NR48 2969 aaKnown RBP20.25■□□□□ 0.83
SMNDC1-201ENST00000369592 IGHV1OR21-1A0A087WYE8 117 aa20.24■□□□□ 0.83
SMNDC1-201ENST00000369592 CPNE6O95741 557 aa20.24■□□□□ 0.83
SMNDC1-201ENST00000369592 AP2A1O95782 977 aa20.24■□□□□ 0.83
SMNDC1-201ENST00000369592 UBE2IP63279 158 aaKnown RBP20.24■□□□□ 0.83
SMNDC1-201ENST00000369592 EIF3IQ13347 325 aaKnown RBP20.24■□□□□ 0.83
SMNDC1-201ENST00000369592 ITGA9Q13797 1035 aa20.24■□□□□ 0.83
SMNDC1-201ENST00000369592 C3orf38Q5JPI3 329 aa20.24■□□□□ 0.83
SMNDC1-201ENST00000369592 LDLRAP1Q5SW96 308 aa20.24■□□□□ 0.83
SMNDC1-201ENST00000369592 GPRC6AQ5T6X5 926 aa20.24■□□□□ 0.83
SMNDC1-201ENST00000369592 DRICH1Q6PGQ1 229 aaPredicted RBP20.24■□□□□ 0.83
SMNDC1-201ENST00000369592 WASH2PQ6VEQ5 465 aa20.24■□□□□ 0.83
SMNDC1-201ENST00000369592 CLEC14AQ86T13 490 aa20.24■□□□□ 0.83
SMNDC1-201ENST00000369592 RASGEF1AQ8N9B8 481 aa20.24■□□□□ 0.83
SMNDC1-201ENST00000369592 TRIM58Q8NG06 486 aa20.24■□□□□ 0.83
SMNDC1-201ENST00000369592 ZNF398Q8TD17 642 aa20.24■□□□□ 0.83
SMNDC1-201ENST00000369592 C1orf54Q8WWF1 131 aa20.24■□□□□ 0.83
SMNDC1-201ENST00000369592 LRRC40Q9H9A6 602 aa20.24■□□□□ 0.83
SMNDC1-201ENST00000369592 WASH6PQ9NQA3 447 aa20.24■□□□□ 0.83
SMNDC1-201ENST00000369592 PRDM8Q9NQV8 689 aa20.24■□□□□ 0.83
SMNDC1-201ENST00000369592 KLC4Q9NSK0 619 aa20.24■□□□□ 0.83
SMNDC1-201ENST00000369592 SSUH2Q9Y2M2 353 aa20.24■□□□□ 0.83
SMNDC1-201ENST00000369592 KIR2DS5A0A0G2JLQ3 304 aa20.23■□□□□ 0.83
SMNDC1-201ENST00000369592 A0A0G2JNG1 304 aa20.23■□□□□ 0.83
SMNDC1-201ENST00000369592 OR5K4A6NMS3 321 aa20.23■□□□□ 0.83
SMNDC1-201ENST00000369592 C2orf81A6NN90 581 aa20.23■□□□□ 0.83
SMNDC1-201ENST00000369592 KIR2DS3K7RE56 304 aa20.23■□□□□ 0.83
SMNDC1-201ENST00000369592 PTMAP06454 111 aaKnown RBP20.23■□□□□ 0.83
SMNDC1-201ENST00000369592 CSF2RBP32927 897 aa20.23■□□□□ 0.83
SMNDC1-201ENST00000369592 CTSCP53634 463 aa20.23■□□□□ 0.83
SMNDC1-201ENST00000369592 DMPKQ09013 629 aa20.23■□□□□ 0.83
SMNDC1-201ENST00000369592 KIR2DS5Q14953 304 aa20.23■□□□□ 0.83
SMNDC1-201ENST00000369592 CRTC3Q6UUV7 619 aa20.23■□□□□ 0.83
SMNDC1-201ENST00000369592 ABRAXAS1Q6UWZ7 409 aa20.23■□□□□ 0.83
SMNDC1-201ENST00000369592 OR13C4Q8NGS5 318 aa20.23■□□□□ 0.83
SMNDC1-201ENST00000369592 ALS2CR12Q96Q35 445 aa20.23■□□□□ 0.83
SMNDC1-201ENST00000369592 NUDT22Q9BRQ3 303 aa20.23■□□□□ 0.83
SMNDC1-201ENST00000369592 SEMA6CQ9H3T2 930 aa20.23■□□□□ 0.83
SMNDC1-201ENST00000369592 SYNDIG1Q9H7V2 258 aa20.23■□□□□ 0.83
SMNDC1-201ENST00000369592 SCHIP1Q9P0W5 487 aaPredicted RBP20.23■□□□□ 0.83
SMNDC1-201ENST00000369592 PDP2Q9P2J9 529 aa20.23■□□□□ 0.83
SMNDC1-201ENST00000369592 FKBPLQ9UIM3 349 aa20.23■□□□□ 0.83
SMNDC1-201ENST00000369592 PIKFYVEQ9Y2I7 2098 aa20.22■□□□□ 0.83
SMNDC1-201ENST00000369592 TRBV23OR9-2A0A075B6M9 112 aa20.22■□□□□ 0.83
SMNDC1-201ENST00000369592 H7C0S8 307 aa20.22■□□□□ 0.83
SMNDC1-201ENST00000369592 PLD2O14939 933 aa20.22■□□□□ 0.83
SMNDC1-201ENST00000369592 PSMD3O43242 534 aa20.22■□□□□ 0.83
SMNDC1-201ENST00000369592 SGTAO43765 313 aa20.22■□□□□ 0.83
SMNDC1-201ENST00000369592 SRP72O76094 671 aaKnown RBP20.22■□□□□ 0.83
SMNDC1-201ENST00000369592 PRAMEF1O95521 474 aa20.22■□□□□ 0.83
SMNDC1-201ENST00000369592 CRTAMO95727 393 aa20.22■□□□□ 0.83
SMNDC1-201ENST00000369592 BRAFP15056 766 aa20.22■□□□□ 0.83
SMNDC1-201ENST00000369592 XRCC1P18887 633 aaPredicted RBP20.22■□□□□ 0.83
SMNDC1-201ENST00000369592 ALDH4A1P30038 563 aa20.22■□□□□ 0.83
SMNDC1-201ENST00000369592 PDE1BQ01064 536 aa20.22■□□□□ 0.83
SMNDC1-201ENST00000369592 CCNG2Q16589 344 aa20.22■□□□□ 0.83
SMNDC1-201ENST00000369592 AGAP9Q5VTM2 703 aa20.22■□□□□ 0.83
SMNDC1-201ENST00000369592 XKR5Q6UX68 686 aa20.22■□□□□ 0.83
SMNDC1-201ENST00000369592 RAB11FIP2Q7L804 512 aa20.22■□□□□ 0.83
SMNDC1-201ENST00000369592 PIM3Q86V86 326 aa20.22■□□□□ 0.83
SMNDC1-201ENST00000369592 GLIS1Q8NBF1 620 aa20.22■□□□□ 0.83
SMNDC1-201ENST00000369592 RDH14Q9HBH5 336 aa20.22■□□□□ 0.83
SMNDC1-201ENST00000369592 DNMT3AQ9Y6K1 912 aaPredicted RBP20.22■□□□□ 0.83
SMNDC1-201ENST00000369592 ERI2A8K979 691 aaKnown RBP20.21■□□□□ 0.83
SMNDC1-201ENST00000369592 KCNJ13O60928 360 aa20.21■□□□□ 0.83
SMNDC1-201ENST00000369592 SUN1O94901 812 aa20.21■□□□□ 0.83
SMNDC1-201ENST00000369592 ITGA2BP08514 1039 aa20.21■□□□□ 0.83
SMNDC1-201ENST00000369592 SLC2A4P14672 509 aa20.21■□□□□ 0.83
SMNDC1-201ENST00000369592 LIMK2P53671 638 aa20.21■□□□□ 0.83
SMNDC1-201ENST00000369592 GPLD1P80108 840 aa20.21■□□□□ 0.83
SMNDC1-201ENST00000369592 HHEXQ03014 270 aa20.21■□□□□ 0.83
SMNDC1-201ENST00000369592 NFATC2Q13469 925 aa20.21■□□□□ 0.83
SMNDC1-201ENST00000369592 USP53Q70EK8 1073 aa20.21■□□□□ 0.83
SMNDC1-201ENST00000369592 HNRNPLLQ8WVV9 542 aaKnown RBP20.21■□□□□ 0.83
SMNDC1-201ENST00000369592 TMEM159Q96B96 161 aa20.21■□□□□ 0.83
SMNDC1-201ENST00000369592 STRADBQ9C0K7 418 aa20.21■□□□□ 0.83
SMNDC1-201ENST00000369592 UCK1Q9HA47 277 aa20.21■□□□□ 0.83
SMNDC1-201ENST00000369592 ETNK1Q9HBU6 452 aa20.21■□□□□ 0.83
SMNDC1-201ENST00000369592 EPB41L5Q9HCM4 733 aa20.21■□□□□ 0.83
SMNDC1-201ENST00000369592 ZNF624Q9P2J8 865 aaPredicted RBP20.21■□□□□ 0.83
SMNDC1-201ENST00000369592 CPNE7Q9UBL6 633 aa20.21■□□□□ 0.83
SMNDC1-201ENST00000369592 DRG1Q9Y295 367 aaKnown RBP20.21■□□□□ 0.83
SMNDC1-201ENST00000369592 ZKSCAN5Q9Y2L8 839 aa20.21■□□□□ 0.83
SMNDC1-201ENST00000369592 HELZ2Q9BYK8 2649 aaKnown RBP20.21■□□□□ 0.83
SMNDC1-201ENST00000369592 TRBV5-4A0A0C4DH59 114 aa20.2■□□□□ 0.82
SMNDC1-201ENST00000369592 IGHV5-10-1A0A0J9YXX1 117 aa20.2■□□□□ 0.82
SMNDC1-201ENST00000369592 MROH6A6NGR9 719 aa20.2■□□□□ 0.82
SMNDC1-201ENST00000369592 ZW10O43264 779 aa20.2■□□□□ 0.82
SMNDC1-201ENST00000369592 ITPKBP27987 946 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms