RNA–Protein interactions for RNA: ENST00000368657.7

TUBE1-201, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-201ENST00000368657 LMF1Q96S06 567 aa10.15□□□□□ -0.78
TUBE1-201ENST00000368657 PRDM9Q9NQV7 894 aa10.15□□□□□ -0.78
TUBE1-201ENST00000368657 ABI3Q9P2A4 366 aa10.15□□□□□ -0.78
TUBE1-201ENST00000368657 SNX10Q9Y5X0 201 aa10.15□□□□□ -0.78
TUBE1-201ENST00000368657 DOCK4Q8N1I0 1966 aa10.15□□□□□ -0.78
TUBE1-201ENST00000368657 IGHV5-51A0A0C4DH38 117 aa10.14□□□□□ -0.79
TUBE1-201ENST00000368657 C9J4A7 227 aa10.14□□□□□ -0.79
TUBE1-201ENST00000368657 VIPP01282 170 aa10.14□□□□□ -0.79
TUBE1-201ENST00000368657 EBLN1P0CF75 366 aa10.14□□□□□ -0.79
TUBE1-201ENST00000368657 RORAP35398 523 aa10.14□□□□□ -0.79
TUBE1-201ENST00000368657 SLC19A1P41440 591 aa10.14□□□□□ -0.79
TUBE1-201ENST00000368657 CAPZBP47756 277 aa10.14□□□□□ -0.79
TUBE1-201ENST00000368657 MAPKAPK2P49137 400 aa10.14□□□□□ -0.79
TUBE1-201ENST00000368657 MARSP56192 900 aaKnown RBP10.14□□□□□ -0.79
TUBE1-201ENST00000368657 UBE2IP63279 158 aaKnown RBP10.14□□□□□ -0.79
TUBE1-201ENST00000368657 HSD11B2P80365 405 aa10.14□□□□□ -0.79
TUBE1-201ENST00000368657 PLCL1Q15111 1095 aa10.14□□□□□ -0.79
TUBE1-201ENST00000368657 IRGCQ6NXR0 463 aa10.14□□□□□ -0.79
TUBE1-201ENST00000368657 FAM198BQ6UWH4 519 aa10.14□□□□□ -0.79
TUBE1-201ENST00000368657 SMYD4Q8IYR2 804 aaPredicted RBP10.14□□□□□ -0.79
TUBE1-201ENST00000368657 FMR1NBQ8N0W7 255 aaPredicted RBP10.14□□□□□ -0.79
TUBE1-201ENST00000368657 PHF10Q8WUB8 498 aaKnown RBP10.14□□□□□ -0.79
TUBE1-201ENST00000368657 C17orf62Q9BQA9 187 aa10.14□□□□□ -0.79
TUBE1-201ENST00000368657 NDC1Q9BTX1 674 aa10.14□□□□□ -0.79
TUBE1-201ENST00000368657 POLDIP3Q9BY77 421 aaKnown RBP10.14□□□□□ -0.79
TUBE1-201ENST00000368657 LIME1Q9H400 295 aa10.14□□□□□ -0.79
TUBE1-201ENST00000368657 PIGVQ9NUD9 493 aa10.14□□□□□ -0.79
TUBE1-201ENST00000368657 COQ3Q9NZJ6 369 aa10.14□□□□□ -0.79
TUBE1-201ENST00000368657 TRAF3IP3Q9Y228 551 aa10.14□□□□□ -0.79
TUBE1-201ENST00000368657 PLEKHA6Q9Y2H5 1048 aa10.14□□□□□ -0.79
TUBE1-201ENST00000368657 TMEM98Q9Y2Y6 226 aa10.14□□□□□ -0.79
TUBE1-201ENST00000368657 PCDHB4Q9Y5E5 795 aa10.14□□□□□ -0.79
TUBE1-201ENST00000368657 HIVEP2P31629 2446 aa10.13□□□□□ -0.79
TUBE1-201ENST00000368657 TRIM49BA6NDI0 452 aa10.13□□□□□ -0.79
TUBE1-201ENST00000368657 INAFM1C9JVW0 142 aa10.13□□□□□ -0.79
TUBE1-201ENST00000368657 I6L893 689 aaPredicted RBP10.13□□□□□ -0.79
TUBE1-201ENST00000368657 RNF225M0QZC1 329 aaPredicted RBP10.13□□□□□ -0.79
TUBE1-201ENST00000368657 LDB2O43679 373 aa10.13□□□□□ -0.79
TUBE1-201ENST00000368657 KLF7O75840 302 aaPredicted RBP10.13□□□□□ -0.79
TUBE1-201ENST00000368657 SIX3O95343 332 aaPredicted RBP10.13□□□□□ -0.79
TUBE1-201ENST00000368657 SMC2O95347 1197 aa10.13□□□□□ -0.79
TUBE1-201ENST00000368657 HOXD4P09016 255 aaPredicted RBP10.13□□□□□ -0.79
TUBE1-201ENST00000368657 AGXTP21549 392 aa10.13□□□□□ -0.79
TUBE1-201ENST00000368657 UGT1A4P22310 534 aa10.13□□□□□ -0.79
TUBE1-201ENST00000368657 NR2F2P24468 414 aa10.13□□□□□ -0.79
TUBE1-201ENST00000368657 MEA1Q16626 185 aa10.13□□□□□ -0.79
TUBE1-201ENST00000368657 NFIL3Q16649 462 aa10.13□□□□□ -0.79
TUBE1-201ENST00000368657 CYP2A13Q16696 494 aa10.13□□□□□ -0.79
TUBE1-201ENST00000368657 TMTC4Q5T4D3 741 aa10.13□□□□□ -0.79
TUBE1-201ENST00000368657 ARTNQ5T4W7 220 aa10.13□□□□□ -0.79
TUBE1-201ENST00000368657 PRAMEF13Q5VWM6 474 aa10.13□□□□□ -0.79
TUBE1-201ENST00000368657 RAET1GQ6H3X3 334 aa10.13□□□□□ -0.79
TUBE1-201ENST00000368657 Q6ZPB1 254 aaPredicted RBP10.13□□□□□ -0.79
TUBE1-201ENST00000368657 CHST15Q7LFX5 561 aaPredicted RBP10.13□□□□□ -0.79
TUBE1-201ENST00000368657 ZSWIM9Q86XI8 627 aa10.13□□□□□ -0.79
TUBE1-201ENST00000368657 CAMK1DQ8IU85 385 aa10.13□□□□□ -0.79
TUBE1-201ENST00000368657 D2HGDHQ8N465 521 aa10.13□□□□□ -0.79
TUBE1-201ENST00000368657 SIMC1Q8NDZ2 872 aa10.13□□□□□ -0.79
TUBE1-201ENST00000368657 CATSPER1Q8NEC5 780 aa10.13□□□□□ -0.79
TUBE1-201ENST00000368657 TEKT4Q8WW24 435 aa10.13□□□□□ -0.79
TUBE1-201ENST00000368657 NACC2Q96BF6 587 aa10.13□□□□□ -0.79
TUBE1-201ENST00000368657 ZNF501Q96CX3 271 aaPredicted RBP10.13□□□□□ -0.79
TUBE1-201ENST00000368657 RMND5BQ96G75 393 aaPredicted RBP10.13□□□□□ -0.79
TUBE1-201ENST00000368657 PLEKHG4BQ96PX9 1271 aa10.13□□□□□ -0.79
TUBE1-201ENST00000368657 ZNF358Q9NW07 568 aa10.13□□□□□ -0.79
TUBE1-201ENST00000368657 RMND1Q9NWS8 449 aa10.13□□□□□ -0.79
TUBE1-201ENST00000368657 HOOK1Q9UJC3 728 aaKnown RBP10.13□□□□□ -0.79
TUBE1-201ENST00000368657 TINAGQ9UJW2 476 aa10.13□□□□□ -0.79
TUBE1-201ENST00000368657 ZNF835Q9Y2P0 537 aa10.13□□□□□ -0.79
TUBE1-201ENST00000368657 COQ4Q9Y3A0 265 aa10.13□□□□□ -0.79
TUBE1-201ENST00000368657 AGPSO00116 658 aa10.12□□□□□ -0.79
TUBE1-201ENST00000368657 HTRA2O43464 458 aaPredicted RBP10.12□□□□□ -0.79
TUBE1-201ENST00000368657 SNX2O60749 519 aa10.12□□□□□ -0.79
TUBE1-201ENST00000368657 CTAG2O75638 210 aa10.12□□□□□ -0.79
TUBE1-201ENST00000368657 RPL13P26373 211 aaKnown RBP10.12□□□□□ -0.79
TUBE1-201ENST00000368657 SERPINA4P29622 427 aa10.12□□□□□ -0.79
TUBE1-201ENST00000368657 DPTQ07507 201 aa10.12□□□□□ -0.79
TUBE1-201ENST00000368657 ADCY2Q08462 1091 aa10.12□□□□□ -0.79
TUBE1-201ENST00000368657 MYBPHQ13203 477 aa10.12□□□□□ -0.79
TUBE1-201ENST00000368657 SEPT7Q16181 437 aaKnown RBP10.12□□□□□ -0.79
TUBE1-201ENST00000368657 ISM2Q6H9L7 571 aa10.12□□□□□ -0.79
TUBE1-201ENST00000368657 PODNL1Q6PEZ8 512 aa10.12□□□□□ -0.79
TUBE1-201ENST00000368657 MARK2Q7KZI7 788 aaKnown RBP10.12□□□□□ -0.79
TUBE1-201ENST00000368657 ZNF354CQ86Y25 554 aa10.12□□□□□ -0.79
TUBE1-201ENST00000368657 RBM12BQ8IXT5 1001 aaKnown RBP10.12□□□□□ -0.79
TUBE1-201ENST00000368657 SYTL1Q8IYJ3 562 aa10.12□□□□□ -0.79
TUBE1-201ENST00000368657 EID3Q8N140 333 aa10.12□□□□□ -0.79
TUBE1-201ENST00000368657 SMARCE1Q969G3 411 aa10.12□□□□□ -0.79
TUBE1-201ENST00000368657 PTERQ96BW5 349 aa10.12□□□□□ -0.79
TUBE1-201ENST00000368657 SDCCAG3Q96C92 435 aa10.12□□□□□ -0.79
TUBE1-201ENST00000368657 PGAP3Q96FM1 320 aaPredicted RBP10.12□□□□□ -0.79
TUBE1-201ENST00000368657 SECISBP2Q96T21 854 aaKnown RBP10.12□□□□□ -0.79
TUBE1-201ENST00000368657 CUBNO60494 3623 aa10.12□□□□□ -0.79
TUBE1-201ENST00000368657 TRAV17A0A0B4J275 112 aa10.11□□□□□ -0.79
TUBE1-201ENST00000368657 GOLGA6CA6NDK9 693 aa10.11□□□□□ -0.79
TUBE1-201ENST00000368657 GOLGA6BA6NDN3 693 aa10.11□□□□□ -0.79
TUBE1-201ENST00000368657 SLC9B1P1A6NJY1 282 aa10.11□□□□□ -0.79
TUBE1-201ENST00000368657 A8MX80 341 aa10.11□□□□□ -0.79
TUBE1-201ENST00000368657 PRAMEF2O60811 474 aa10.11□□□□□ -0.79
TUBE1-201ENST00000368657 RAMP2O60895 175 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms