RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 FEZ2Q9UHY8 353 aaPredicted RBP18.68■□□□□ 0.58
CKS1B-203ENST00000368439 FKBPLQ9UIM3 349 aa18.68■□□□□ 0.58
CKS1B-203ENST00000368439 AGAP14A8MT82 685 aa18.67■□□□□ 0.58
CKS1B-203ENST00000368439 LDB2O43679 373 aa18.67■□□□□ 0.58
CKS1B-203ENST00000368439 SNX2O60749 519 aa18.67■□□□□ 0.58
CKS1B-203ENST00000368439 STIP1P31948 543 aaKnown RBP18.67■□□□□ 0.58
CKS1B-203ENST00000368439 EIF3IQ13347 325 aaKnown RBP18.67■□□□□ 0.58
CKS1B-203ENST00000368439 ITGA9Q13797 1035 aa18.67■□□□□ 0.58
CKS1B-203ENST00000368439 P3H1Q32P28 736 aa18.67■□□□□ 0.58
CKS1B-203ENST00000368439 GPRC6AQ5T6X5 926 aa18.67■□□□□ 0.58
CKS1B-203ENST00000368439 NKAIN2Q5VXU1 208 aa18.67■□□□□ 0.58
CKS1B-203ENST00000368439 USP53Q70EK8 1073 aa18.67■□□□□ 0.58
CKS1B-203ENST00000368439 RAB11FIP2Q7L804 512 aa18.67■□□□□ 0.58
CKS1B-203ENST00000368439 CLEC14AQ86T13 490 aa18.67■□□□□ 0.58
CKS1B-203ENST00000368439 ZNF761Q86XN6 746 aaPredicted RBP18.67■□□□□ 0.58
CKS1B-203ENST00000368439 RASGEF1AQ8N9B8 481 aa18.67■□□□□ 0.58
CKS1B-203ENST00000368439 OR13C4Q8NGS5 318 aa18.67■□□□□ 0.58
CKS1B-203ENST00000368439 ZNF398Q8TD17 642 aa18.67■□□□□ 0.58
CKS1B-203ENST00000368439 STRADBQ9C0K7 418 aa18.67■□□□□ 0.58
CKS1B-203ENST00000368439 GRPEL1Q9HAV7 217 aa18.67■□□□□ 0.58
CKS1B-203ENST00000368439 RALYQ9UKM9 306 aaKnown RBP18.67■□□□□ 0.58
CKS1B-203ENST00000368439 PPP2R2CQ9Y2T4 447 aa18.67■□□□□ 0.58
CKS1B-203ENST00000368439 PTPRQQ9UMZ3 2332 aa18.67■□□□□ 0.58
CKS1B-203ENST00000368439 KIR2DS5A0A0G2JLQ3 304 aa18.66■□□□□ 0.58
CKS1B-203ENST00000368439 A0A0G2JNG1 304 aa18.66■□□□□ 0.58
CKS1B-203ENST00000368439 KIR2DS3K7RE56 304 aa18.66■□□□□ 0.58
CKS1B-203ENST00000368439 PLD2O14939 933 aa18.66■□□□□ 0.58
CKS1B-203ENST00000368439 TNFSF15O95150 251 aa18.66■□□□□ 0.58
CKS1B-203ENST00000368439 PRAMEF1O95521 474 aa18.66■□□□□ 0.58
CKS1B-203ENST00000368439 CRTAMO95727 393 aa18.66■□□□□ 0.58
CKS1B-203ENST00000368439 AP2A1O95782 977 aa18.66■□□□□ 0.58
CKS1B-203ENST00000368439 HGFP14210 728 aa18.66■□□□□ 0.58
CKS1B-203ENST00000368439 HOXB3P14651 431 aaPredicted RBP18.66■□□□□ 0.58
CKS1B-203ENST00000368439 CSF2RBP32927 897 aa18.66■□□□□ 0.58
CKS1B-203ENST00000368439 MLLT3P42568 568 aaPredicted RBP18.66■□□□□ 0.58
CKS1B-203ENST00000368439 CTSCP53634 463 aa18.66■□□□□ 0.58
CKS1B-203ENST00000368439 PCBP4P57723 403 aaKnown RBP18.66■□□□□ 0.58
CKS1B-203ENST00000368439 UBE2IP63279 158 aaKnown RBP18.66■□□□□ 0.58
CKS1B-203ENST00000368439 HHEXQ03014 270 aa18.66■□□□□ 0.58
CKS1B-203ENST00000368439 KIR2DS5Q14953 304 aa18.66■□□□□ 0.58
CKS1B-203ENST00000368439 INSCQ1MX18 579 aa18.66■□□□□ 0.58
CKS1B-203ENST00000368439 MAP9Q49MG5 647 aa18.66■□□□□ 0.58
CKS1B-203ENST00000368439 LDLRAP1Q5SW96 308 aa18.66■□□□□ 0.58
CKS1B-203ENST00000368439 PIM3Q86V86 326 aa18.66■□□□□ 0.58
CKS1B-203ENST00000368439 FBXO39Q8N4B4 442 aa18.66■□□□□ 0.58
CKS1B-203ENST00000368439 GDAP1Q8TB36 358 aa18.66■□□□□ 0.58
CKS1B-203ENST00000368439 C1orf54Q8WWF1 131 aa18.66■□□□□ 0.58
CKS1B-203ENST00000368439 ALS2CR12Q96Q35 445 aa18.66■□□□□ 0.58
CKS1B-203ENST00000368439 LRRC40Q9H9A6 602 aa18.66■□□□□ 0.58
CKS1B-203ENST00000368439 THSD1Q9NS62 852 aa18.66■□□□□ 0.58
CKS1B-203ENST00000368439 KCNK4Q9NYG8 393 aa18.66■□□□□ 0.58
CKS1B-203ENST00000368439 LHX6Q9UPM6 363 aa18.66■□□□□ 0.58
CKS1B-203ENST00000368439 IGHV5-10-1A0A0J9YXX1 117 aa18.65■□□□□ 0.58
CKS1B-203ENST00000368439 OR5K4A6NMS3 321 aa18.65■□□□□ 0.58
CKS1B-203ENST00000368439 ZW10O43264 779 aa18.65■□□□□ 0.58
CKS1B-203ENST00000368439 SRP72O76094 671 aaKnown RBP18.65■□□□□ 0.58
CKS1B-203ENST00000368439 ITGA2BP08514 1039 aa18.65■□□□□ 0.58
CKS1B-203ENST00000368439 SLC2A4P14672 509 aa18.65■□□□□ 0.58
CKS1B-203ENST00000368439 BRAFP15056 766 aa18.65■□□□□ 0.58
CKS1B-203ENST00000368439 RBMS1P29558 406 aaKnown RBP18.65■□□□□ 0.58
CKS1B-203ENST00000368439 BIRC2Q13490 618 aa18.65■□□□□ 0.58
CKS1B-203ENST00000368439 C16orf72Q14CZ0 275 aa18.65■□□□□ 0.58
CKS1B-203ENST00000368439 FOXR1Q6PIV2 292 aa18.65■□□□□ 0.58
CKS1B-203ENST00000368439 ABRAXAS1Q6UWZ7 409 aa18.65■□□□□ 0.58
CKS1B-203ENST00000368439 SLC9B2Q86UD5 537 aa18.65■□□□□ 0.58
CKS1B-203ENST00000368439 TAB3Q8N5C8 712 aaPredicted RBP18.65■□□□□ 0.58
CKS1B-203ENST00000368439 ZNF248Q8NDW4 579 aa18.65■□□□□ 0.58
CKS1B-203ENST00000368439 TRIM58Q8NG06 486 aa18.65■□□□□ 0.58
CKS1B-203ENST00000368439 CRELD1Q96HD1 420 aa18.65■□□□□ 0.58
CKS1B-203ENST00000368439 OSGEPL1Q9H4B0 414 aa18.65■□□□□ 0.58
CKS1B-203ENST00000368439 ZNF624Q9P2J8 865 aaPredicted RBP18.65■□□□□ 0.58
CKS1B-203ENST00000368439 CPNE7Q9UBL6 633 aa18.65■□□□□ 0.58
CKS1B-203ENST00000368439 DNAJC16Q9Y2G8 782 aa18.65■□□□□ 0.58
CKS1B-203ENST00000368439 LOXL2Q9Y4K0 774 aa18.65■□□□□ 0.58
CKS1B-203ENST00000368439 RRP8O43159 456 aaKnown RBP18.64■□□□□ 0.57
CKS1B-203ENST00000368439 PSMD3O43242 534 aa18.64■□□□□ 0.57
CKS1B-203ENST00000368439 TPH1P17752 444 aa18.64■□□□□ 0.57
CKS1B-203ENST00000368439 XRCC1P18887 633 aaPredicted RBP18.64■□□□□ 0.57
CKS1B-203ENST00000368439 LIMK2P53671 638 aa18.64■□□□□ 0.57
CKS1B-203ENST00000368439 GPLD1P80108 840 aa18.64■□□□□ 0.57
CKS1B-203ENST00000368439 PDE1BQ01064 536 aa18.64■□□□□ 0.57
CKS1B-203ENST00000368439 DMPKQ09013 629 aa18.64■□□□□ 0.57
CKS1B-203ENST00000368439 CCDC173Q0VFZ6 552 aa18.64■□□□□ 0.57
CKS1B-203ENST00000368439 NFATC2Q13469 925 aa18.64■□□□□ 0.57
CKS1B-203ENST00000368439 GTF2H3Q13889 308 aa18.64■□□□□ 0.57
CKS1B-203ENST00000368439 XKR5Q6UX68 686 aa18.64■□□□□ 0.57
CKS1B-203ENST00000368439 WASH2PQ6VEQ5 465 aa18.64■□□□□ 0.57
CKS1B-203ENST00000368439 MICALCLQ6ZW33 695 aa18.64■□□□□ 0.57
CKS1B-203ENST00000368439 PRUNE1Q86TP1 453 aa18.64■□□□□ 0.57
CKS1B-203ENST00000368439 TRAPPC5Q8IUR0 188 aa18.64■□□□□ 0.57
CKS1B-203ENST00000368439 GLIS1Q8NBF1 620 aa18.64■□□□□ 0.57
CKS1B-203ENST00000368439 OR4D9Q8NGE8 314 aa18.64■□□□□ 0.57
CKS1B-203ENST00000368439 TMEM159Q96B96 161 aa18.64■□□□□ 0.57
CKS1B-203ENST00000368439 CCDC97Q96F63 343 aaPredicted RBP18.64■□□□□ 0.57
CKS1B-203ENST00000368439 SLC38A3Q99624 504 aa18.64■□□□□ 0.57
CKS1B-203ENST00000368439 ASB8Q9H765 288 aa18.64■□□□□ 0.57
CKS1B-203ENST00000368439 ETNK1Q9HBU6 452 aa18.64■□□□□ 0.57
CKS1B-203ENST00000368439 WASH6PQ9NQA3 447 aa18.64■□□□□ 0.57
CKS1B-203ENST00000368439 TMEM9Q9P0T7 183 aa18.64■□□□□ 0.57
CKS1B-203ENST00000368439 PDP2Q9P2J9 529 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms