RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 CXorf57Q6NSI4 855 aaKnown RBP17.91■□□□□ 0.46
UBQLN4-201ENST00000368309 GPRIN3Q6ZVF9 776 aa17.91■□□□□ 0.46
UBQLN4-201ENST00000368309 FNDC5Q8NAU1 212 aa17.91■□□□□ 0.46
UBQLN4-201ENST00000368309 CCT7Q99832 543 aa17.91■□□□□ 0.46
UBQLN4-201ENST00000368309 OLAHQ9NV23 265 aa17.91■□□□□ 0.46
UBQLN4-201ENST00000368309 AIG1Q9NVV5 245 aa17.91■□□□□ 0.46
UBQLN4-201ENST00000368309 COMMD8Q9NX08 183 aa17.91■□□□□ 0.46
UBQLN4-201ENST00000368309 FCF1Q9Y324 198 aaKnown RBP17.91■□□□□ 0.46
UBQLN4-201ENST00000368309 A0A1B0GVM2 712 aa17.91■□□□□ 0.46
UBQLN4-201ENST00000368309 E2F3O00716 465 aa17.91■□□□□ 0.46
UBQLN4-201ENST00000368309 MT-ND1P03886 318 aa17.91■□□□□ 0.46
UBQLN4-201ENST00000368309 GNAO1P09471 354 aa17.91■□□□□ 0.46
UBQLN4-201ENST00000368309 HSD17B1P14061 328 aa17.91■□□□□ 0.46
UBQLN4-201ENST00000368309 IL10P22301 178 aa17.91■□□□□ 0.46
UBQLN4-201ENST00000368309 SMARCB1Q12824 385 aa17.91■□□□□ 0.46
UBQLN4-201ENST00000368309 CYP51A1Q16850 503 aa17.91■□□□□ 0.46
UBQLN4-201ENST00000368309 PLA2G4EQ3MJ16 856 aa17.91■□□□□ 0.46
UBQLN4-201ENST00000368309 NHSL2Q5HYW2 709 aa17.91■□□□□ 0.46
UBQLN4-201ENST00000368309 PPP4R4Q6NUP7 873 aa17.91■□□□□ 0.46
UBQLN4-201ENST00000368309 CARNMT1Q8N4J0 409 aa17.91■□□□□ 0.46
UBQLN4-201ENST00000368309 TRIML2Q8N7C3 387 aa17.91■□□□□ 0.46
UBQLN4-201ENST00000368309 ANKFN1Q8N957 763 aa17.91■□□□□ 0.46
UBQLN4-201ENST00000368309 OR56A4Q8NGH8 313 aa17.91■□□□□ 0.46
UBQLN4-201ENST00000368309 TMEM125Q96AQ2 219 aa17.91■□□□□ 0.46
UBQLN4-201ENST00000368309 DDX18Q9NVP1 670 aaKnown RBP17.91■□□□□ 0.46
UBQLN4-201ENST00000368309 PLK2Q9NYY3 685 aa17.91■□□□□ 0.46
UBQLN4-201ENST00000368309 CCDC154A6NI56 674 aa17.91■□□□□ 0.46
UBQLN4-201ENST00000368309 H0YJX3 145 aa17.91■□□□□ 0.46
UBQLN4-201ENST00000368309 STX16O14662 325 aa17.91■□□□□ 0.46
UBQLN4-201ENST00000368309 SYNCRIPO60506 623 aaKnown RBP17.91■□□□□ 0.46
UBQLN4-201ENST00000368309 VPS4BO75351 444 aa17.91■□□□□ 0.46
UBQLN4-201ENST00000368309 MLYCDO95822 493 aa17.91■□□□□ 0.46
UBQLN4-201ENST00000368309 ALPIP09923 528 aa17.91■□□□□ 0.46
UBQLN4-201ENST00000368309 COL6A1P12109 1028 aa17.91■□□□□ 0.46
UBQLN4-201ENST00000368309 PSMA4P25789 261 aaKnown RBP17.91■□□□□ 0.46
UBQLN4-201ENST00000368309 IL12AP29459 219 aa17.91■□□□□ 0.46
UBQLN4-201ENST00000368309 ZFP36L2P47974 494 aaKnown RBP17.91■□□□□ 0.46
UBQLN4-201ENST00000368309 GSK3BP49841 420 aa17.91■□□□□ 0.46
UBQLN4-201ENST00000368309 ERVPABLB-1P60509 514 aa17.91■□□□□ 0.46
UBQLN4-201ENST00000368309 PLIN5Q00G26 463 aa17.91■□□□□ 0.46
UBQLN4-201ENST00000368309 INPP5AQ14642 412 aa17.91■□□□□ 0.46
UBQLN4-201ENST00000368309 TGFBIQ15582 683 aa17.91■□□□□ 0.46
UBQLN4-201ENST00000368309 CMTR2Q8IYT2 770 aaKnown RBP17.91■□□□□ 0.46
UBQLN4-201ENST00000368309 FAM47BQ8NA70 645 aa17.91■□□□□ 0.46
UBQLN4-201ENST00000368309 TMIGD2Q96BF3 282 aa17.91■□□□□ 0.46
UBQLN4-201ENST00000368309 EID2BQ96D98 161 aa17.91■□□□□ 0.46
UBQLN4-201ENST00000368309 ELAC1Q9H777 363 aaKnown RBP17.91■□□□□ 0.46
UBQLN4-201ENST00000368309 ACTR3BQ9P1U1 418 aa17.91■□□□□ 0.46
UBQLN4-201ENST00000368309 COMMD10Q9Y6G5 202 aa17.91■□□□□ 0.46
UBQLN4-201ENST00000368309 KATNA1O75449 491 aa17.9■□□□□ 0.46
UBQLN4-201ENST00000368309 HMGA1P17096 107 aaKnown RBP17.9■□□□□ 0.46
UBQLN4-201ENST00000368309 CDH15P55291 814 aa17.9■□□□□ 0.46
UBQLN4-201ENST00000368309 LIPEQ05469 1076 aa17.9■□□□□ 0.46
UBQLN4-201ENST00000368309 ELAVL2Q12926 359 aaKnown RBP17.9■□□□□ 0.46
UBQLN4-201ENST00000368309 MTA1Q13330 715 aa17.9■□□□□ 0.46
UBQLN4-201ENST00000368309 AAK1Q2M2I8 961 aa17.9■□□□□ 0.46
UBQLN4-201ENST00000368309 OGFOD2Q6N063 350 aa17.9■□□□□ 0.46
UBQLN4-201ENST00000368309 SPATA19Q7Z5L4 167 aa17.9■□□□□ 0.46
UBQLN4-201ENST00000368309 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.9■□□□□ 0.464e-8■■■■■ 47.9
UBQLN4-201ENST00000368309 CDK5RAP1Q96SZ6 601 aaKnown RBP17.9■□□□□ 0.46
UBQLN4-201ENST00000368309 ALG2Q9H553 416 aa17.9■□□□□ 0.46
UBQLN4-201ENST00000368309 INTS7Q9NVH2 962 aaKnown RBP17.9■□□□□ 0.46
UBQLN4-201ENST00000368309 RNF103-CHMP3A0A140T963 221 aa17.9■□□□□ 0.46
UBQLN4-201ENST00000368309 AQP12BA6NM10 295 aa17.9■□□□□ 0.46
UBQLN4-201ENST00000368309 H6PDO95479 791 aa17.9■□□□□ 0.46
UBQLN4-201ENST00000368309 PRR35P0CG20 571 aa17.9■□□□□ 0.46
UBQLN4-201ENST00000368309 RCAN2Q14206 197 aa17.9■□□□□ 0.46
UBQLN4-201ENST00000368309 TAF12Q16514 161 aa17.9■□□□□ 0.46
UBQLN4-201ENST00000368309 C6orf136Q5SQH8 315 aa17.9■□□□□ 0.46
UBQLN4-201ENST00000368309 AP1ARQ63HQ0 302 aa17.9■□□□□ 0.46
UBQLN4-201ENST00000368309 LETMD1Q6P1Q0 360 aa17.9■□□□□ 0.46
UBQLN4-201ENST00000368309 EPHX4Q8IUS5 362 aa17.9■□□□□ 0.46
UBQLN4-201ENST00000368309 AQP12AQ8IXF9 295 aa17.9■□□□□ 0.46
UBQLN4-201ENST00000368309 KIAA2013Q8IYS2 634 aa17.9■□□□□ 0.46
UBQLN4-201ENST00000368309 TTC30BQ8N4P2 665 aa17.9■□□□□ 0.46
UBQLN4-201ENST00000368309 RBM38Q9H0Z9 239 aaKnown RBP17.9■□□□□ 0.46
UBQLN4-201ENST00000368309 MKI67P46013 3256 aaKnown RBP17.9■□□□□ 0.46
UBQLN4-201ENST00000368309 H0Y626 953 aa17.9■□□□□ 0.46
UBQLN4-201ENST00000368309 KLK8O60259 260 aa17.9■□□□□ 0.46
UBQLN4-201ENST00000368309 POLR2JP52435 117 aaKnown RBP17.9■□□□□ 0.46
UBQLN4-201ENST00000368309 NR1H2P55055 460 aa17.9■□□□□ 0.46
UBQLN4-201ENST00000368309 PLD1Q13393 1074 aa17.9■□□□□ 0.46
UBQLN4-201ENST00000368309 XKR7Q5GH72 579 aa17.9■□□□□ 0.46
UBQLN4-201ENST00000368309 Q6ZSR9 355 aa17.9■□□□□ 0.46
UBQLN4-201ENST00000368309 TM6SF2Q9BZW4 377 aa17.9■□□□□ 0.46
UBQLN4-201ENST00000368309 TRPM5Q9NZQ8 1165 aa17.9■□□□□ 0.46
UBQLN4-201ENST00000368309 HACD3Q9P035 362 aa17.9■□□□□ 0.46
UBQLN4-201ENST00000368309 VPS9D1Q9Y2B5 631 aa17.9■□□□□ 0.46
UBQLN4-201ENST00000368309 K7ERQ8 282 aa17.89■□□□□ 0.45
UBQLN4-201ENST00000368309 ARVCFO00192 962 aa17.89■□□□□ 0.45
UBQLN4-201ENST00000368309 PFDN6O15212 129 aa17.89■□□□□ 0.45
UBQLN4-201ENST00000368309 HNRNPRO43390 633 aaKnown RBP17.89■□□□□ 0.45
UBQLN4-201ENST00000368309 TUFMP49411 452 aaKnown RBP17.89■□□□□ 0.45
UBQLN4-201ENST00000368309 HTR6P50406 440 aa17.89■□□□□ 0.45
UBQLN4-201ENST00000368309 DYNC1I2Q13409 638 aaKnown RBP17.89■□□□□ 0.45
UBQLN4-201ENST00000368309 USP41Q3LFD5 358 aa17.89■□□□□ 0.45
UBQLN4-201ENST00000368309 TXNDC11Q6PKC3 985 aa17.89■□□□□ 0.45
UBQLN4-201ENST00000368309 NPAS4Q8IUM7 802 aa17.89■□□□□ 0.45
UBQLN4-201ENST00000368309 ADGRG5Q8IZF4 528 aa17.89■□□□□ 0.45
UBQLN4-201ENST00000368309 KCTD14Q9BQ13 255 aaPredicted RBP17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms