RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 IRAK1BP1Q5VVH5 260 aa13.47□□□□□ -0.25
PRKN-205ENST00000366897 NIPAL1Q6NVV3 410 aa13.47□□□□□ -0.25
PRKN-205ENST00000366897 SYVN1Q86TM6 617 aa13.47□□□□□ -0.25
PRKN-205ENST00000366897 FBXO39Q8N4B4 442 aa13.47□□□□□ -0.25
PRKN-205ENST00000366897 CDYL2Q8N8U2 506 aa13.47□□□□□ -0.25
PRKN-205ENST00000366897 PDPRQ8NCN5 879 aa13.47□□□□□ -0.25
PRKN-205ENST00000366897 ZNF296Q8WUU4 475 aaPredicted RBP13.47□□□□□ -0.25
PRKN-205ENST00000366897 FIG4Q92562 907 aa13.47□□□□□ -0.25
PRKN-205ENST00000366897 PSMG2Q969U7 264 aa13.47□□□□□ -0.25
PRKN-205ENST00000366897 B3GALT6Q96L58 329 aa13.47□□□□□ -0.25
PRKN-205ENST00000366897 CCDC138Q96M89 665 aa13.47□□□□□ -0.25
PRKN-205ENST00000366897 ATOH8Q96SQ7 321 aa13.47□□□□□ -0.25
PRKN-205ENST00000366897 BDH2Q9BUT1 245 aa13.47□□□□□ -0.25
PRKN-205ENST00000366897 TRIM54Q9BYV2 358 aa13.47□□□□□ -0.25
PRKN-205ENST00000366897 MROH8Q9H579 483 aa13.47□□□□□ -0.25
PRKN-205ENST00000366897 AGO3Q9H9G7 860 aaKnown RBP13.47□□□□□ -0.25
PRKN-205ENST00000366897 RNF112Q9ULX5 631 aa13.47□□□□□ -0.25
PRKN-205ENST00000366897 PCDHB3Q9Y5E6 796 aa13.47□□□□□ -0.25
PRKN-205ENST00000366897 U3KQV3 271 aa13.47□□□□□ -0.25
PRKN-205ENST00000366897 TRIM64BA6NI03 449 aa13.46□□□□□ -0.25
PRKN-205ENST00000366897 SOBPA7XYQ1 873 aa13.46□□□□□ -0.25
PRKN-205ENST00000366897 SLC22A3O75751 556 aa13.46□□□□□ -0.25
PRKN-205ENST00000366897 JAK1P23458 1154 aa13.46□□□□□ -0.25
PRKN-205ENST00000366897 FMO4P31512 558 aa13.46□□□□□ -0.25
PRKN-205ENST00000366897 HOXD12P35452 270 aa13.46□□□□□ -0.25
PRKN-205ENST00000366897 MTHFRP42898 656 aa13.46□□□□□ -0.25
PRKN-205ENST00000366897 POLR2JP52435 117 aaKnown RBP13.46□□□□□ -0.25
PRKN-205ENST00000366897 TMBIM6P55061 237 aa13.46□□□□□ -0.25
PRKN-205ENST00000366897 IFITM3Q01628 133 aa13.46□□□□□ -0.25
PRKN-205ENST00000366897 CRHR2Q13324 411 aa13.46□□□□□ -0.25
PRKN-205ENST00000366897 NKG7Q16617 165 aa13.46□□□□□ -0.25
PRKN-205ENST00000366897 TIGD5Q53EQ6 642 aa13.46□□□□□ -0.25
PRKN-205ENST00000366897 GTF2IRD2BQ6EKJ0 949 aa13.46□□□□□ -0.25
PRKN-205ENST00000366897 ENPP6Q6UWR7 440 aa13.46□□□□□ -0.25
PRKN-205ENST00000366897 GTF2IRD2Q86UP8 949 aa13.46□□□□□ -0.25
PRKN-205ENST00000366897 OSCP1Q8WVF1 389 aa13.46□□□□□ -0.25
PRKN-205ENST00000366897 CFHR5Q9BXR6 569 aa13.46□□□□□ -0.25
PRKN-205ENST00000366897 SLC25A51Q9H1U9 297 aa13.46□□□□□ -0.25
PRKN-205ENST00000366897 KCNH4Q9UQ05 1017 aa13.46□□□□□ -0.25
PRKN-205ENST00000366897 ACTL7AQ9Y615 435 aa13.46□□□□□ -0.25
PRKN-205ENST00000366897 HS3ST4Q9Y661 456 aa13.46□□□□□ -0.25
PRKN-205ENST00000366897 NYNRINQ9P2P1 1898 aaKnown RBP13.46□□□□□ -0.25
PRKN-205ENST00000366897 LAMA3Q16787 3333 aa13.46□□□□□ -0.25
PRKN-205ENST00000366897 NPEPPSL1A6NEC2 478 aa13.46□□□□□ -0.25
PRKN-205ENST00000366897 ZBBXA8MT70 800 aa13.46□□□□□ -0.25
PRKN-205ENST00000366897 LDB2O43679 373 aa13.46□□□□□ -0.25
PRKN-205ENST00000366897 XPNPEP2O43895 674 aa13.46□□□□□ -0.25
PRKN-205ENST00000366897 ABCB7O75027 752 aa13.46□□□□□ -0.25
PRKN-205ENST00000366897 CAPN15O75808 1086 aa13.46□□□□□ -0.25
PRKN-205ENST00000366897 PARNO95453 639 aaKnown RBP13.46□□□□□ -0.25
PRKN-205ENST00000366897 MATN4O95460 622 aa13.46□□□□□ -0.25
PRKN-205ENST00000366897 PEX11BO96011 259 aa13.46□□□□□ -0.25
PRKN-205ENST00000366897 ALPLP05186 524 aa13.46□□□□□ -0.25
PRKN-205ENST00000366897 MMP2P08253 660 aa13.46□□□□□ -0.25
PRKN-205ENST00000366897 FGF4P08620 206 aa13.46□□□□□ -0.25
PRKN-205ENST00000366897 FDXRP22570 491 aa13.46□□□□□ -0.25
PRKN-205ENST00000366897 DAG1Q14118 895 aa13.46□□□□□ -0.25
PRKN-205ENST00000366897 RBBP7Q16576 425 aa13.46□□□□□ -0.25
PRKN-205ENST00000366897 ARTNQ5T4W7 220 aa13.46□□□□□ -0.25
PRKN-205ENST00000366897 TMEM53Q6P2H8 277 aa13.46□□□□□ -0.25
PRKN-205ENST00000366897 UTS2BQ765I0 119 aa13.46□□□□□ -0.25
PRKN-205ENST00000366897 LRRTM3Q86VH5 581 aa13.46□□□□□ -0.25
PRKN-205ENST00000366897 FNDC5Q8NAU1 212 aa13.46□□□□□ -0.25
PRKN-205ENST00000366897 ZFP90Q8TF47 636 aa13.46□□□□□ -0.25
PRKN-205ENST00000366897 RTP3Q9BQQ7 232 aa13.46□□□□□ -0.25
PRKN-205ENST00000366897 TBCDQ9BTW9 1192 aa13.46□□□□□ -0.25
PRKN-205ENST00000366897 CATSPERBQ9H7T0 1116 aa13.46□□□□□ -0.25
PRKN-205ENST00000366897 A0A0U1RQS6 177 aa13.46□□□□□ -0.26
PRKN-205ENST00000366897 F8W810 466 aa13.46□□□□□ -0.26
PRKN-205ENST00000366897 CD3EAPO15446 510 aaKnown RBP13.46□□□□□ -0.26
PRKN-205ENST00000366897 ECI2O75521 394 aa13.46□□□□□ -0.26
PRKN-205ENST00000366897 HPCAL1P37235 193 aa13.46□□□□□ -0.26
PRKN-205ENST00000366897 SCNN1GP51170 649 aa13.46□□□□□ -0.26
PRKN-205ENST00000366897 LCP2Q13094 533 aa13.46□□□□□ -0.26
PRKN-205ENST00000366897 LAPTM4AQ15012 233 aa13.46□□□□□ -0.26
PRKN-205ENST00000366897 ZNF792Q3KQV3 632 aa13.46□□□□□ -0.26
PRKN-205ENST00000366897 ALFQ53S48 1182 aa13.46□□□□□ -0.26
PRKN-205ENST00000366897 XKR4Q5GH76 650 aa13.46□□□□□ -0.26
PRKN-205ENST00000366897 THAP5Q7Z6K1 395 aa13.46□□□□□ -0.26
PRKN-205ENST00000366897 TMEM199Q8N511 208 aa13.46□□□□□ -0.26
PRKN-205ENST00000366897 ITFG1Q8TB96 612 aa13.46□□□□□ -0.26
PRKN-205ENST00000366897 RAB2BQ8WUD1 216 aa13.46□□□□□ -0.26
PRKN-205ENST00000366897 IMP4Q96G21 291 aaKnown RBP13.46□□□□□ -0.26
PRKN-205ENST00000366897 ALPK1Q96QP1 1244 aa13.46□□□□□ -0.26
PRKN-205ENST00000366897 AMBRA1Q9C0C7 1298 aa13.46□□□□□ -0.26
PRKN-205ENST00000366897 KATNBL1Q9H079 304 aa13.46□□□□□ -0.26
PRKN-205ENST00000366897 MFSD1Q9H3U5 465 aa13.46□□□□□ -0.26
PRKN-205ENST00000366897 NMUR1Q9HB89 426 aa13.46□□□□□ -0.26
PRKN-205ENST00000366897 AIG1Q9NVV5 245 aa13.46□□□□□ -0.26
PRKN-205ENST00000366897 TMEM9Q9P0T7 183 aa13.46□□□□□ -0.26
PRKN-205ENST00000366897 SUN2Q9UH99 717 aa13.46□□□□□ -0.26
PRKN-205ENST00000366897 CPQQ9Y646 472 aa13.46□□□□□ -0.26
PRKN-205ENST00000366897 SLC7A4O43246 635 aa13.45□□□□□ -0.26
PRKN-205ENST00000366897 SNX2O60749 519 aa13.45□□□□□ -0.26
PRKN-205ENST00000366897 RHOBTB1O94844 696 aa13.45□□□□□ -0.26
PRKN-205ENST00000366897 CDKN1CP49918 316 aaPredicted RBP13.45□□□□□ -0.26
PRKN-205ENST00000366897 NRG1Q02297 640 aaPredicted RBP13.45□□□□□ -0.26
PRKN-205ENST00000366897 MARC1Q5VT66 337 aa13.45□□□□□ -0.26
PRKN-205ENST00000366897 SPESP1Q6UW49 350 aa13.45□□□□□ -0.26
PRKN-205ENST00000366897 SLC16A12Q6ZSM3 486 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms