RNA–Protein interactions for RNA: ENST00000366442.2

SHC1-201, Transcript of SHC adaptor protein 1, humanhuman

TSL 3

Gene SHC1, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-201ENST00000366442 VAC14Q08AM6 782 aa23.29■■□□□ 1.32
SHC1-201ENST00000366442 INSCQ1MX18 579 aa23.29■■□□□ 1.32
SHC1-201ENST00000366442 KHDC1Q4VXA5 237 aaKnown RBP23.29■■□□□ 1.32
SHC1-201ENST00000366442 ANKRD20A2Q5SQ80 823 aa23.29■■□□□ 1.32
SHC1-201ENST00000366442 ANKRD20A1Q5TYW2 823 aa23.29■■□□□ 1.32
SHC1-201ENST00000366442 ANKRD20A3Q5VUR7 823 aa23.29■■□□□ 1.32
SHC1-201ENST00000366442 DARS2Q6PI48 645 aaKnown RBP23.29■■□□□ 1.32
SHC1-201ENST00000366442 WDR74Q6RFH5 385 aaPredicted RBP23.29■■□□□ 1.32
SHC1-201ENST00000366442 RANBP10Q6VN20 620 aa23.29■■□□□ 1.32
SHC1-201ENST00000366442 ZNF761Q86XN6 746 aaPredicted RBP23.29■■□□□ 1.32
SHC1-201ENST00000366442 ZNF547Q8IVP9 402 aa23.29■■□□□ 1.32
SHC1-201ENST00000366442 UBL4BQ8N7F7 174 aa23.29■■□□□ 1.32
SHC1-201ENST00000366442 RCBTB1Q8NDN9 531 aa23.29■■□□□ 1.32
SHC1-201ENST00000366442 USP7Q93009 1102 aa23.29■■□□□ 1.32
SHC1-201ENST00000366442 PPP1R2P1Q96PQ5 205 aa23.29■■□□□ 1.32
SHC1-201ENST00000366442 CPNE7Q9UBL6 633 aa23.29■■□□□ 1.32
SHC1-201ENST00000366442 SLC23A2Q9UGH3 650 aa23.29■■□□□ 1.32
SHC1-201ENST00000366442 PRAMEF33A0A0G2JMD5 474 aa23.28■■□□□ 1.32
SHC1-201ENST00000366442 C9orf172C9J069 976 aa23.28■■□□□ 1.32
SHC1-201ENST00000366442 TK2O00142 265 aa23.28■■□□□ 1.32
SHC1-201ENST00000366442 ATXN7O15265 892 aaPredicted RBP23.28■■□□□ 1.32
SHC1-201ENST00000366442 KCNN4O15554 427 aa23.28■■□□□ 1.32
SHC1-201ENST00000366442 PRAMEF10O60809 474 aa23.28■■□□□ 1.32
SHC1-201ENST00000366442 LIPCP11150 499 aa23.28■■□□□ 1.32
SHC1-201ENST00000366442 XRCC1P18887 633 aaPredicted RBP23.28■■□□□ 1.32
SHC1-201ENST00000366442 ADRA1AP35348 466 aa23.28■■□□□ 1.32
SHC1-201ENST00000366442 MAPK10P53779 464 aa23.28■■□□□ 1.32
SHC1-201ENST00000366442 UBE2IP63279 158 aaKnown RBP23.28■■□□□ 1.32
SHC1-201ENST00000366442 TMEM115Q12893 351 aaPredicted RBP23.28■■□□□ 1.32
SHC1-201ENST00000366442 NFATC2Q13469 925 aa23.28■■□□□ 1.32
SHC1-201ENST00000366442 ITGA9Q13797 1035 aa23.28■■□□□ 1.32
SHC1-201ENST00000366442 PRPSAP1Q14558 356 aa23.28■■□□□ 1.32
SHC1-201ENST00000366442 TMEM164Q5U3C3 297 aa23.28■■□□□ 1.32
SHC1-201ENST00000366442 AADACL2Q6P093 401 aa23.28■■□□□ 1.32
SHC1-201ENST00000366442 AGBL5Q8NDL9 886 aa23.28■■□□□ 1.32
SHC1-201ENST00000366442 SPATA13Q96N96 652 aa23.28■■□□□ 1.32
SHC1-201ENST00000366442 FICDQ9BVA6 458 aa23.28■■□□□ 1.32
SHC1-201ENST00000366442 ZCCHC2Q9C0B9 1178 aaKnown RBP23.28■■□□□ 1.32
SHC1-201ENST00000366442 OSGEPL1Q9H4B0 414 aa23.28■■□□□ 1.32
SHC1-201ENST00000366442 EPB41L1Q9H4G0 881 aa23.28■■□□□ 1.32
SHC1-201ENST00000366442 UCK1Q9HA47 277 aa23.28■■□□□ 1.32
SHC1-201ENST00000366442 ATMQ13315 3056 aa23.28■■□□□ 1.32
SHC1-201ENST00000366442 KALRNO60229 2985 aa23.28■■□□□ 1.32
SHC1-201ENST00000366442 GLYATL1P3A0A0U1RQE8 302 aa23.27■■□□□ 1.32
SHC1-201ENST00000366442 K7ENP7 123 aa23.27■■□□□ 1.32
SHC1-201ENST00000366442 AGTP01019 485 aa23.27■■□□□ 1.32
SHC1-201ENST00000366442 PSMB4P28070 264 aa23.27■■□□□ 1.32
SHC1-201ENST00000366442 GTF2H3Q13889 308 aa23.27■■□□□ 1.32
SHC1-201ENST00000366442 CHRNA6Q15825 494 aa23.27■■□□□ 1.32
SHC1-201ENST00000366442 LDLRAP1Q5SW96 308 aa23.27■■□□□ 1.32
SHC1-201ENST00000366442 ARHGAP40Q5TG30 622 aa23.27■■□□□ 1.32
SHC1-201ENST00000366442 INO80CQ6PI98 192 aaPredicted RBP23.27■■□□□ 1.32
SHC1-201ENST00000366442 FAM151BQ6UXP7 276 aa23.27■■□□□ 1.32
SHC1-201ENST00000366442 WASH2PQ6VEQ5 465 aa23.27■■□□□ 1.32
SHC1-201ENST00000366442 TTC13Q8NBP0 860 aa23.27■■□□□ 1.32
SHC1-201ENST00000366442 DDHD1Q8NEL9 900 aa23.27■■□□□ 1.32
SHC1-201ENST00000366442 GDAP1Q8TB36 358 aa23.27■■□□□ 1.32
SHC1-201ENST00000366442 CCNL2Q96S94 520 aaPredicted RBP23.27■■□□□ 1.32
SHC1-201ENST00000366442 DESI2Q9BSY9 194 aa23.27■■□□□ 1.32
SHC1-201ENST00000366442 WASH6PQ9NQA3 447 aa23.27■■□□□ 1.32
SHC1-201ENST00000366442 TMEM9Q9P0T7 183 aa23.27■■□□□ 1.32
SHC1-201ENST00000366442 TRIM10Q9UDY6 481 aa23.27■■□□□ 1.32
SHC1-201ENST00000366442 GOLGA6L9A6NEM1 432 aa23.26■■□□□ 1.31
SHC1-201ENST00000366442 LILRA5A6NI73 299 aa23.26■■□□□ 1.31
SHC1-201ENST00000366442 EIF4E1BA6NMX2 242 aaKnown RBP23.26■■□□□ 1.31
SHC1-201ENST00000366442 ERVH48-1M5A8F1 160 aa23.26■■□□□ 1.31
SHC1-201ENST00000366442 AGRPO00253 132 aa23.26■■□□□ 1.31
SHC1-201ENST00000366442 STX7O15400 261 aaKnown RBP23.26■■□□□ 1.31
SHC1-201ENST00000366442 KCNJ13O60928 360 aa23.26■■□□□ 1.31
SHC1-201ENST00000366442 CCL4P13236 92 aa23.26■■□□□ 1.31
SHC1-201ENST00000366442 CSTF2P33240 577 aaKnown RBP eCLIP23.26■■□□□ 1.31
SHC1-201ENST00000366442 RHDQ02161 417 aa23.26■■□□□ 1.31
SHC1-201ENST00000366442 TAF1AQ15573 450 aaPredicted RBP23.26■■□□□ 1.31
SHC1-201ENST00000366442 PLA2G4EQ3MJ16 856 aa23.26■■□□□ 1.31
SHC1-201ENST00000366442 AGAP9Q5VTM2 703 aa23.26■■□□□ 1.31
SHC1-201ENST00000366442 CCDC81Q6ZN84 652 aa23.26■■□□□ 1.31
SHC1-201ENST00000366442 C11orf96Q7Z7L8 435 aa23.26■■□□□ 1.31
SHC1-201ENST00000366442 TRAPPC5Q8IUR0 188 aa23.26■■□□□ 1.31
SHC1-201ENST00000366442 SPC24Q8NBT2 197 aa23.26■■□□□ 1.31
SHC1-201ENST00000366442 CCDC112Q8NEF3 446 aa23.26■■□□□ 1.31
SHC1-201ENST00000366442 TTC25Q96NG3 672 aa23.26■■□□□ 1.31
SHC1-201ENST00000366442 TAAR9Q96RI9 348 aa23.26■■□□□ 1.31
SHC1-201ENST00000366442 FAM118BQ9BPY3 351 aa23.26■■□□□ 1.31
SHC1-201ENST00000366442 ZMYND15Q9H091 742 aa23.26■■□□□ 1.31
SHC1-201ENST00000366442 SMOXQ9NWM0 555 aa23.26■■□□□ 1.31
SHC1-201ENST00000366442 FOXJ2Q9P0K8 574 aa23.26■■□□□ 1.31
SHC1-201ENST00000366442 PCDHGA3Q9Y5H0 932 aa23.26■■□□□ 1.31
SHC1-201ENST00000366442 C5orf60A6NFR6 353 aa23.25■■□□□ 1.31
SHC1-201ENST00000366442 IQCJ-SCHIP1C9J366 451 aaPredicted RBP23.25■■□□□ 1.31
SHC1-201ENST00000366442 GAPDHSO14556 408 aaPredicted RBP23.25■■□□□ 1.31
SHC1-201ENST00000366442 DDX3YO15523 660 aaKnown RBP23.25■■□□□ 1.31
SHC1-201ENST00000366442 FGF3P11487 239 aaPredicted RBP23.25■■□□□ 1.31
SHC1-201ENST00000366442 VCLP18206 1134 aa23.25■■□□□ 1.31
SHC1-201ENST00000366442 LPOP22079 712 aaPredicted RBP23.25■■□□□ 1.31
SHC1-201ENST00000366442 MPSTP25325 297 aa23.25■■□□□ 1.31
SHC1-201ENST00000366442 ABRAXAS1Q6UWZ7 409 aa23.25■■□□□ 1.31
SHC1-201ENST00000366442 KLHDC8BQ8IXV7 354 aa23.25■■□□□ 1.31
SHC1-201ENST00000366442 CCDC110Q8TBZ0 833 aa23.25■■□□□ 1.31
SHC1-201ENST00000366442 SCHIP1Q9P0W5 487 aaPredicted RBP23.25■■□□□ 1.31
SHC1-201ENST00000366442 DNAJC16Q9Y2G8 782 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms