RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 VSTM1Q6UX27 236 aa14.73□□□□□ -0.05
CHD4-201ENST00000357008 ZNF730Q6ZMV8 503 aa14.73□□□□□ -0.05
CHD4-201ENST00000357008 ADGRG2Q8IZP9 1017 aa14.73□□□□□ -0.05
CHD4-201ENST00000357008 ZBTB2Q8N680 514 aa14.73□□□□□ -0.05
CHD4-201ENST00000357008 LPPQ93052 612 aa14.73□□□□□ -0.05
CHD4-201ENST00000357008 MCMBPQ9BTE3 642 aa14.73□□□□□ -0.05
CHD4-201ENST00000357008 ELL3Q9HB65 397 aaPredicted RBP14.73□□□□□ -0.05
CHD4-201ENST00000357008 PMF1-BGLAPU3KQ54 211 aa14.73□□□□□ -0.05
CHD4-201ENST00000357008 PGRP06401 933 aa14.73□□□□□ -0.05
CHD4-201ENST00000357008 S100A6P06703 90 aa14.73□□□□□ -0.05
CHD4-201ENST00000357008 TIE1P35590 1138 aa14.73□□□□□ -0.05
CHD4-201ENST00000357008 TCEAL5Q5H9L2 206 aa14.73□□□□□ -0.05
CHD4-201ENST00000357008 C17orf64Q86WR6 236 aa14.73□□□□□ -0.05
CHD4-201ENST00000357008 TTC29Q8NA56 475 aaPredicted RBP14.73□□□□□ -0.05
CHD4-201ENST00000357008 GRPEL2Q8TAA5 225 aa14.73□□□□□ -0.05
CHD4-201ENST00000357008 EIF2B3Q9NR50 452 aaKnown RBP14.73□□□□□ -0.05
CHD4-201ENST00000357008 MIOSQ9NXC5 875 aa14.73□□□□□ -0.05
CHD4-201ENST00000357008 TLL2Q9Y6L7 1015 aa14.73□□□□□ -0.05
CHD4-201ENST00000357008 GTPBP1O00178 669 aaKnown RBP14.73□□□□□ -0.05
CHD4-201ENST00000357008 SNHG28P0DPA3 235 aa14.73□□□□□ -0.05
CHD4-201ENST00000357008 SSR2P43308 183 aa14.73□□□□□ -0.05
CHD4-201ENST00000357008 ZDHHC24Q6UX98 284 aa14.73□□□□□ -0.05
CHD4-201ENST00000357008 FRMD7Q6ZUT3 714 aa14.73□□□□□ -0.05
CHD4-201ENST00000357008 FSTL5Q8N475 847 aaPredicted RBP14.73□□□□□ -0.05
CHD4-201ENST00000357008 TMCO6Q96DC7 493 aa14.73□□□□□ -0.05
CHD4-201ENST00000357008 CD320Q9NPF0 282 aa14.73□□□□□ -0.05
CHD4-201ENST00000357008 GRIN2DO15399 1336 aa14.73□□□□□ -0.05
CHD4-201ENST00000357008 GLYATL1P3A0A0U1RQE8 302 aa14.73□□□□□ -0.05
CHD4-201ENST00000357008 OR6C75A6NL08 312 aa14.73□□□□□ -0.05
CHD4-201ENST00000357008 COL6A1P12109 1028 aa14.73□□□□□ -0.05
CHD4-201ENST00000357008 RHOQP17081 205 aa14.73□□□□□ -0.05
CHD4-201ENST00000357008 YBEYP58557 167 aaPredicted RBP14.73□□□□□ -0.05
CHD4-201ENST00000357008 CYP4F8P98187 520 aa14.73□□□□□ -0.05
CHD4-201ENST00000357008 DCST1Q5T197 706 aa14.73□□□□□ -0.05
CHD4-201ENST00000357008 LAPTM4BQ86VI4 370 aa14.73□□□□□ -0.05
CHD4-201ENST00000357008 CERS5Q8N5B7 392 aa14.73□□□□□ -0.05
CHD4-201ENST00000357008 FCGR1BQ92637 280 aa14.73□□□□□ -0.05
CHD4-201ENST00000357008 TTLL2Q9BWV7 592 aa14.73□□□□□ -0.05
CHD4-201ENST00000357008 SLC25A51Q9H1U9 297 aa14.73□□□□□ -0.05
CHD4-201ENST00000357008 CNOT6Q9ULM6 557 aaKnown RBP14.73□□□□□ -0.05
CHD4-201ENST00000357008 MAN2B2Q9Y2E5 1009 aa14.73□□□□□ -0.05
CHD4-201ENST00000357008 AGLP35573 1532 aa14.72□□□□□ -0.05
CHD4-201ENST00000357008 ISM1B1AKI9 464 aa14.72□□□□□ -0.05
CHD4-201ENST00000357008 PTX3P26022 381 aaPredicted RBP14.72□□□□□ -0.05
CHD4-201ENST00000357008 GJA8P48165 433 aa14.72□□□□□ -0.05
CHD4-201ENST00000357008 CACNG1Q06432 222 aa14.72□□□□□ -0.05
CHD4-201ENST00000357008 TAMM41Q96BW9 452 aa14.72□□□□□ -0.05
CHD4-201ENST00000357008 TBATAQ96M53 351 aa14.72□□□□□ -0.05
CHD4-201ENST00000357008 FCRL4Q96PJ5 515 aa14.72□□□□□ -0.05
CHD4-201ENST00000357008 NUSAP1Q9BXS6 441 aaKnown RBP14.72□□□□□ -0.05
CHD4-201ENST00000357008 ZDHHC18Q9NUE0 388 aa14.72□□□□□ -0.05
CHD4-201ENST00000357008 IQCMA0A1B0GVH7 501 aa14.72□□□□□ -0.05
CHD4-201ENST00000357008 ZNF879B4DU55 563 aa14.72□□□□□ -0.05
CHD4-201ENST00000357008 C9orf64Q5T6V5 341 aa14.72□□□□□ -0.05
CHD4-201ENST00000357008 TATDN1Q6P1N9 297 aa14.72□□□□□ -0.05
CHD4-201ENST00000357008 FAM156AQ8NDB6 213 aa14.72□□□□□ -0.05
CHD4-201ENST00000357008 AP2M1Q96CW1 435 aa14.72□□□□□ -0.05
CHD4-201ENST00000357008 HSD3B7Q9H2F3 369 aa14.72□□□□□ -0.05
CHD4-201ENST00000357008 CHRNB2P17787 502 aa14.72□□□□□ -0.05
CHD4-201ENST00000357008 CXCL17Q6UXB2 119 aa14.72□□□□□ -0.05
CHD4-201ENST00000357008 CHST15Q7LFX5 561 aaPredicted RBP14.72□□□□□ -0.05
CHD4-201ENST00000357008 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.72□□□□□ -0.05
CHD4-201ENST00000357008 RAVER1Q8IY67 606 aaKnown RBP14.72□□□□□ -0.05
CHD4-201ENST00000357008 CYP4X1Q8N118 509 aa14.72□□□□□ -0.05
CHD4-201ENST00000357008 OR8H1Q8NGG4 311 aa14.72□□□□□ -0.05
CHD4-201ENST00000357008 IRGQQ8WZA9 623 aa14.72□□□□□ -0.05
CHD4-201ENST00000357008 ASAH2Q9NR71 780 aa14.72□□□□□ -0.05
CHD4-201ENST00000357008 CNTNAP1P78357 1384 aa14.72□□□□□ -0.05
CHD4-201ENST00000357008 LRRIQ1Q96JM4 1722 aa14.72□□□□□ -0.05
CHD4-201ENST00000357008 ICAM3P32942 547 aa14.72□□□□□ -0.05
CHD4-201ENST00000357008 EVX2Q03828 476 aa14.72□□□□□ -0.05
CHD4-201ENST00000357008 MINDY2Q8NBR6 621 aa14.72□□□□□ -0.05
CHD4-201ENST00000357008 ADAMTS15Q8TE58 950 aa14.72□□□□□ -0.05
CHD4-201ENST00000357008 DNAJC1Q96KC8 554 aaKnown RBP14.72□□□□□ -0.05
CHD4-201ENST00000357008 ZNF558Q96NG5 402 aa14.72□□□□□ -0.05
CHD4-201ENST00000357008 GPATCH1Q9BRR8 931 aaKnown RBP14.72□□□□□ -0.05
CHD4-201ENST00000357008 SLC7A8Q9UHI5 535 aa14.72□□□□□ -0.05
CHD4-201ENST00000357008 STXBP5LQ9Y2K9 1186 aa14.72□□□□□ -0.05
CHD4-201ENST00000357008 GPSM3Q9Y4H4 160 aa14.72□□□□□ -0.05
CHD4-201ENST00000357008 SPATA31D1Q6ZQQ2 1576 aa14.72□□□□□ -0.05
CHD4-201ENST00000357008 ABHD14A-ACY1A0A1B0GW23 586 aa14.72□□□□□ -0.05
CHD4-201ENST00000357008 ZNF99A8MXY4 864 aaPredicted RBP14.72□□□□□ -0.05
CHD4-201ENST00000357008 PPP1R11O60927 126 aaPredicted RBP14.72□□□□□ -0.05
CHD4-201ENST00000357008 RPLP0P05388 317 aaKnown RBP14.72□□□□□ -0.05
CHD4-201ENST00000357008 AMD1P17707 334 aa14.72□□□□□ -0.05
CHD4-201ENST00000357008 SLC7A1P30825 629 aa14.72□□□□□ -0.05
CHD4-201ENST00000357008 WDR4P57081 412 aaKnown RBP14.72□□□□□ -0.05
CHD4-201ENST00000357008 ARF5P84085 180 aa14.72□□□□□ -0.05
CHD4-201ENST00000357008 ZBTB6Q15916 424 aa14.72□□□□□ -0.05
CHD4-201ENST00000357008 POM121L1PQ3SYA9 428 aa14.72□□□□□ -0.05
CHD4-201ENST00000357008 TMEM214Q6NUQ4 689 aaKnown RBP14.72□□□□□ -0.05
CHD4-201ENST00000357008 AIF1LQ9BQI0 150 aa14.72□□□□□ -0.05
CHD4-201ENST00000357008 FAM172BPA6NC97 362 aa14.71□□□□□ -0.05
CHD4-201ENST00000357008 MSI1O43347 362 aaKnown RBP14.71□□□□□ -0.05
CHD4-201ENST00000357008 DDNO94850 711 aaPredicted RBP14.71□□□□□ -0.05
CHD4-201ENST00000357008 RAP2AP10114 183 aa14.71□□□□□ -0.05
CHD4-201ENST00000357008 PRPS2P11908 318 aa14.71□□□□□ -0.05
CHD4-201ENST00000357008 IRAK1BP1Q5VVH5 260 aa14.71□□□□□ -0.05
CHD4-201ENST00000357008 DAW1Q8N136 415 aa14.71□□□□□ -0.05
CHD4-201ENST00000357008 TOP1MTQ969P6 601 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms