RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 TAS2R50P59544 299 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 MAXP61244 160 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 ZBTB6Q15916 424 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 PUS10Q3MIT2 529 aaKnown RBP6.42□□□□□ -1.38
UPF2-201ENST00000356352 LDLRAP1Q5SW96 308 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 PLPP4Q5VZY2 271 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 PSRC1Q6PGN9 363 aaPredicted RBP6.42□□□□□ -1.38
UPF2-201ENST00000356352 NUP54Q7Z3B4 507 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 FAM124AQ86V42 546 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 CNTD1Q8N815 330 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 TSEN2Q8NCE0 465 aaKnown RBP6.42□□□□□ -1.38
UPF2-201ENST00000356352 FAR1Q8WVX9 515 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 ROPN1LQ96C74 230 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 C1GALT1C1Q96EU7 318 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 NSMCE3Q96MG7 304 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 MRPL45Q9BRJ2 306 aaKnown RBP6.42□□□□□ -1.38
UPF2-201ENST00000356352 NUSAP1Q9BXS6 441 aaKnown RBP6.42□□□□□ -1.38
UPF2-201ENST00000356352 MAGEH1Q9H213 219 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 IFT46Q9NQC8 304 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 OAS3Q9Y6K5 1087 aaKnown RBP6.42□□□□□ -1.38
UPF2-201ENST00000356352 E9PAM4 449 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 DDX3YO15523 660 aaKnown RBP6.42□□□□□ -1.38
UPF2-201ENST00000356352 AP5Z1O43299 807 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 B3GALT2O43825 422 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 POP4O95707 220 aaKnown RBP6.42□□□□□ -1.38
UPF2-201ENST00000356352 HNRNPLP14866 589 aaKnown RBP eCLIP6.42□□□□□ -1.38
UPF2-201ENST00000356352 TACR2P21452 398 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 C2orf80Q0P641 193 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 PLA2G4EQ3MJ16 856 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 KLHL26Q53HC5 615 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 METTL21CQ5VZV1 264 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 RBM44Q6ZP01 1051 aaKnown RBP6.42□□□□□ -1.38
UPF2-201ENST00000356352 LRRC55Q6ZSA7 311 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 SLC24A5Q71RS6 500 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 GET4Q7L5D6 327 aaPredicted RBP6.42□□□□□ -1.38
UPF2-201ENST00000356352 SLCO6A1Q86UG4 719 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 ZZZ3Q8IYH5 903 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 PRELID2Q8N945 189 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 C11orf65Q8NCR3 313 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 TTLQ8NG68 377 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 OR2AJ1Q8NGZ0 328 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 VANGL1Q8TAA9 524 aaPredicted RBP6.42□□□□□ -1.38
UPF2-201ENST00000356352 HIPK3Q9H422 1215 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 POLMQ9NP87 494 aaPredicted RBP6.42□□□□□ -1.38
UPF2-201ENST00000356352 TIMMDC1Q9NPL8 285 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 ZNF180Q9UJW8 692 aa6.42□□□□□ -1.38
UPF2-201ENST00000356352 MAP2K7O14733 419 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 PAPSS1O43252 624 aaPredicted RBP6.41□□□□□ -1.38
UPF2-201ENST00000356352 CCNB2O95067 398 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 NADKO95544 446 aaPredicted RBP6.41□□□□□ -1.38
UPF2-201ENST00000356352 FADS2O95864 444 aaKnown RBP6.41□□□□□ -1.38
UPF2-201ENST00000356352 PCCBP05166 539 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 GPIP06744 558 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 MMP3P08254 477 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 ITPKAP23677 461 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 OR1D2P34982 312 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 MAPK12P53778 367 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 EIF5AP63241 154 aaKnown RBP6.41□□□□□ -1.38
UPF2-201ENST00000356352 DLG1Q12959 904 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 TIGD2Q4W5G0 525 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 SLC9B1Q4ZJI4 515 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 EARS2Q5JPH6 523 aaKnown RBP6.41□□□□□ -1.38
UPF2-201ENST00000356352 GLYATQ6IB77 296 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.41□□□□□ -1.385e-6■■■■■ 81.8
UPF2-201ENST00000356352 AVL9Q8NBF6 648 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 OR2L5Q8NG80 312 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 WFIKKN2Q8TEU8 576 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 TWIST2Q8WVJ9 160 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 COPS5Q92905 334 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 C7orf26Q96N11 449 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 PSKH2Q96QS6 385 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 ZNF347Q96SE7 839 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 SSU72Q9NP77 194 aaKnown RBP6.41□□□□□ -1.38
UPF2-201ENST00000356352 TAS2R7Q9NYW3 318 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 FAM198AQ9UFP1 575 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 PCDHGB1Q9Y5G3 927 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 PTPRJQ12913 1337 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 SLC22A2O15244 555 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 EDF1O60869 148 aaKnown RBP6.41□□□□□ -1.38
UPF2-201ENST00000356352 CDH3P22223 829 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 GNALP38405 381 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 CASRP41180 1078 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 LSM3P62310 102 aaKnown RBP6.41□□□□□ -1.38
UPF2-201ENST00000356352 GAD2Q05329 585 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 USP4Q13107 963 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 HEPACAMQ14CZ8 416 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 DUSP28Q4G0W2 176 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 SNAP47Q5SQN1 464 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 ADNP2Q6IQ32 1131 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 PLET1Q6UQ28 207 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 CHRDL2Q6WN34 429 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 TRABD2AQ86V40 505 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 RAB43Q86YS6 212 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 PQLC1Q8N2U9 271 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 ANKFN1Q8N957 763 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 SLC44A1Q8WWI5 657 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 ELMO3Q96BJ8 720 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 ERLEC1Q96DZ1 483 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 FAXDC2Q96IV6 333 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 B3GALT6Q96L58 329 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms