RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 CTPS2Q9NRF8 586 aa17.14■□□□□ 0.33
COL27A1-201ENST00000356083 CPNE6O95741 557 aa17.14■□□□□ 0.33
COL27A1-201ENST00000356083 FAM13CQ8NE31 585 aa17.14■□□□□ 0.33
COL27A1-201ENST00000356083 LCN9Q8WX39 176 aa17.14■□□□□ 0.33
COL27A1-201ENST00000356083 B4DGG1 531 aa17.14■□□□□ 0.33
COL27A1-201ENST00000356083 TBX1O43435 398 aa17.14■□□□□ 0.33
COL27A1-201ENST00000356083 MSCO60682 206 aa17.14■□□□□ 0.33
COL27A1-201ENST00000356083 ZNF8P17098 575 aaPredicted RBP17.14■□□□□ 0.33
COL27A1-201ENST00000356083 GOT1P17174 413 aa17.14■□□□□ 0.33
COL27A1-201ENST00000356083 TAS2R50P59544 299 aa17.14■□□□□ 0.33
COL27A1-201ENST00000356083 FOXR2Q6PJQ5 311 aa17.14■□□□□ 0.33
COL27A1-201ENST00000356083 FSTL5Q8N475 847 aaPredicted RBP17.14■□□□□ 0.33
COL27A1-201ENST00000356083 OR5T2Q8NGG2 359 aa17.14■□□□□ 0.33
COL27A1-201ENST00000356083 GTPBP3Q969Y2 492 aaKnown RBP17.14■□□□□ 0.33
COL27A1-201ENST00000356083 GRM6O15303 877 aa17.14■□□□□ 0.33
COL27A1-201ENST00000356083 AP5Z1O43299 807 aa17.14■□□□□ 0.33
COL27A1-201ENST00000356083 VNN2O95498 520 aa17.14■□□□□ 0.33
COL27A1-201ENST00000356083 DPYSL3Q14195 570 aa17.14■□□□□ 0.33
COL27A1-201ENST00000356083 CLP1Q92989 425 aaKnown RBP17.14■□□□□ 0.33
COL27A1-201ENST00000356083 OSBPL11Q9BXB4 747 aa17.14■□□□□ 0.33
COL27A1-201ENST00000356083 TSPAN4O14817 238 aa17.13■□□□□ 0.33
COL27A1-201ENST00000356083 CPNE3O75131 537 aaKnown RBP17.13■□□□□ 0.33
COL27A1-201ENST00000356083 TRUB2O95900 331 aaKnown RBP17.13■□□□□ 0.33
COL27A1-201ENST00000356083 MAPK12P53778 367 aa17.13■□□□□ 0.33
COL27A1-201ENST00000356083 TTC27Q6P3X3 843 aa17.13■□□□□ 0.33
COL27A1-201ENST00000356083 C1orf186Q6ZWK4 172 aa17.13■□□□□ 0.33
COL27A1-201ENST00000356083 TMC3Q7Z5M5 1100 aa17.13■□□□□ 0.33
COL27A1-201ENST00000356083 WNT8BQ93098 351 aa17.13■□□□□ 0.33
COL27A1-201ENST00000356083 ELNP15502 786 aa17.13■□□□□ 0.33
COL27A1-201ENST00000356083 MLLT3P42568 568 aaPredicted RBP17.13■□□□□ 0.33
COL27A1-201ENST00000356083 XIAPP98170 497 aa17.13■□□□□ 0.33
COL27A1-201ENST00000356083 PARP6Q2NL67 630 aa17.13■□□□□ 0.33
COL27A1-201ENST00000356083 FAM153CQ494X1 144 aa17.13■□□□□ 0.33
COL27A1-201ENST00000356083 SRFBP1Q8NEF9 429 aaKnown RBP17.13■□□□□ 0.33
COL27A1-201ENST00000356083 DNAJA3Q96EY1 480 aa17.13■□□□□ 0.33
COL27A1-201ENST00000356083 PLCL2Q9UPR0 1127 aa17.13■□□□□ 0.33
COL27A1-201ENST00000356083 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.13■□□□□ 0.33
COL27A1-201ENST00000356083 SLC25A3Q00325 362 aa17.13■□□□□ 0.33
COL27A1-201ENST00000356083 RDH11Q8TC12 318 aa17.13■□□□□ 0.33
COL27A1-201ENST00000356083 ZNF20P17024 532 aa17.13■□□□□ 0.33
COL27A1-201ENST00000356083 ZNF268Q14587 947 aaPredicted RBP17.13■□□□□ 0.33
COL27A1-201ENST00000356083 BOLLQ8N9W6 283 aaKnown RBP17.13■□□□□ 0.33
COL27A1-201ENST00000356083 ZSWIM3Q96MP5 696 aa17.13■□□□□ 0.33
COL27A1-201ENST00000356083 FTHL17Q9BXU8 183 aa17.13■□□□□ 0.33
COL27A1-201ENST00000356083 YARS2Q9Y2Z4 477 aaKnown RBP17.13■□□□□ 0.33
COL27A1-201ENST00000356083 CROCC2H7BZ55 1655 aa17.13■□□□□ 0.33
COL27A1-201ENST00000356083 PER2O15055 1255 aa17.13■□□□□ 0.33
COL27A1-201ENST00000356083 NUAK1O60285 661 aa17.13■□□□□ 0.33
COL27A1-201ENST00000356083 CDK14O94921 469 aa17.13■□□□□ 0.33
COL27A1-201ENST00000356083 TIE1P35590 1138 aa17.13■□□□□ 0.33
COL27A1-201ENST00000356083 TRMT10AQ8TBZ6 339 aaKnown RBP17.13■□□□□ 0.33
COL27A1-201ENST00000356083 NPAS2Q99743 824 aa17.13■□□□□ 0.33
COL27A1-201ENST00000356083 PEX12O00623 359 aa17.13■□□□□ 0.33
COL27A1-201ENST00000356083 SMIM10L2AP0DMW4 78 aa17.13■□□□□ 0.33
COL27A1-201ENST00000356083 SMIM10L2BP0DMW5 78 aa17.13■□□□□ 0.33
COL27A1-201ENST00000356083 SEMG2Q02383 582 aa17.13■□□□□ 0.33
COL27A1-201ENST00000356083 KCTD4Q8WVF5 259 aa17.13■□□□□ 0.33
COL27A1-201ENST00000356083 TCF25Q9BQ70 676 aa17.13■□□□□ 0.33
COL27A1-201ENST00000356083 MGME1Q9BQP7 344 aa17.13■□□□□ 0.33
COL27A1-201ENST00000356083 VNN3Q9NY84 501 aa17.13■□□□□ 0.33
COL27A1-201ENST00000356083 MAZP56270 477 aaKnown RBP17.12■□□□□ 0.33
COL27A1-201ENST00000356083 RHBDF2Q6PJF5 856 aa17.12■□□□□ 0.33
COL27A1-201ENST00000356083 KYAT3Q6YP21 454 aaKnown RBP17.12■□□□□ 0.33
COL27A1-201ENST00000356083 COX18Q8N8Q8 333 aa17.12■□□□□ 0.33
COL27A1-201ENST00000356083 COPS8Q99627 209 aa17.12■□□□□ 0.33
COL27A1-201ENST00000356083 PCDHB3Q9Y5E6 796 aa17.12■□□□□ 0.33
COL27A1-201ENST00000356083 PCDHGA12O60330 932 aa17.12■□□□□ 0.33
COL27A1-201ENST00000356083 DRG2P55039 364 aaKnown RBP17.12■□□□□ 0.33
COL27A1-201ENST00000356083 CDH13P55290 713 aa17.12■□□□□ 0.33
COL27A1-201ENST00000356083 EFR3AQ14156 821 aa17.12■□□□□ 0.33
COL27A1-201ENST00000356083 CAPN13Q6MZZ7 669 aaPredicted RBP17.12■□□□□ 0.33
COL27A1-201ENST00000356083 TMEM125Q96AQ2 219 aa17.12■□□□□ 0.33
COL27A1-201ENST00000356083 PPM1MQ96MI6 270 aa17.12■□□□□ 0.33
COL27A1-201ENST00000356083 BANF1O75531 89 aa17.12■□□□□ 0.33
COL27A1-201ENST00000356083 UBXN7O94888 489 aa17.12■□□□□ 0.33
COL27A1-201ENST00000356083 SULT2A1Q06520 285 aa17.12■□□□□ 0.33
COL27A1-201ENST00000356083 NFATC2Q13469 925 aa17.12■□□□□ 0.33
COL27A1-201ENST00000356083 KDM7AQ6ZMT4 941 aa17.12■□□□□ 0.33
COL27A1-201ENST00000356083 CEP97Q8IW35 865 aa17.12■□□□□ 0.33
COL27A1-201ENST00000356083 PCDH19Q8TAB3 1148 aa17.12■□□□□ 0.33
COL27A1-201ENST00000356083 CERS2Q96G23 380 aa17.12■□□□□ 0.33
COL27A1-201ENST00000356083 SEMA6BQ9H3T3 888 aa17.12■□□□□ 0.33
COL27A1-201ENST00000356083 MYH7BA7E2Y1 1941 aa17.12■□□□□ 0.33
COL27A1-201ENST00000356083 E7EQ34 232 aa17.12■□□□□ 0.33
COL27A1-201ENST00000356083 H3BUI4 141 aa17.12■□□□□ 0.33
COL27A1-201ENST00000356083 M0R036 132 aa17.12■□□□□ 0.33
COL27A1-201ENST00000356083 ODF4Q2M2E3 257 aa17.12■□□□□ 0.33
COL27A1-201ENST00000356083 PRAMEF17Q5VTA0 474 aa17.12■□□□□ 0.33
COL27A1-201ENST00000356083 B3GNT6Q6ZMB0 384 aa17.12■□□□□ 0.33
COL27A1-201ENST00000356083 ANKRD46Q86W74 232 aa17.12■□□□□ 0.33
COL27A1-201ENST00000356083 ZNF471Q9BX82 626 aaPredicted RBP17.12■□□□□ 0.33
COL27A1-201ENST00000356083 DDX20Q9UHI6 824 aaKnown RBP17.12■□□□□ 0.33
COL27A1-201ENST00000356083 WASF2Q9Y6W5 498 aa17.12■□□□□ 0.33
COL27A1-201ENST00000356083 GPR75-ASB3A0A0A6YYF3 556 aa17.12■□□□□ 0.33
COL27A1-201ENST00000356083 ENTPD1P49961 510 aa17.12■□□□□ 0.33
COL27A1-201ENST00000356083 RAB10P61026 200 aa17.12■□□□□ 0.33
COL27A1-201ENST00000356083 IFI35P80217 286 aaPredicted RBP17.12■□□□□ 0.33
COL27A1-201ENST00000356083 PRKCDQ05655 676 aa17.12■□□□□ 0.33
COL27A1-201ENST00000356083 AAGABQ6PD74 315 aa17.12■□□□□ 0.33
COL27A1-201ENST00000356083 PTCD3Q96EY7 689 aaKnown RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms