RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 LPOP22079 712 aaPredicted RBP19.37■□□□□ 0.69
COL13A1-201ENST00000354547 PIK3CGP48736 1102 aa19.37■□□□□ 0.69
COL13A1-201ENST00000354547 HTR6P50406 440 aa19.37■□□□□ 0.69
COL13A1-201ENST00000354547 PLCL1Q15111 1095 aa19.37■□□□□ 0.69
COL13A1-201ENST00000354547 TAF1AQ15573 450 aaPredicted RBP19.37■□□□□ 0.69
COL13A1-201ENST00000354547 CTSL3PQ5NE16 218 aa19.37■□□□□ 0.69
COL13A1-201ENST00000354547 OTUD3Q5T2D3 398 aaPredicted RBP19.37■□□□□ 0.69
COL13A1-201ENST00000354547 GPRIN3Q6ZVF9 776 aa19.37■□□□□ 0.69
COL13A1-201ENST00000354547 AQP12AQ8IXF9 295 aa19.37■□□□□ 0.69
COL13A1-201ENST00000354547 OR6K2Q8NGY2 324 aa19.37■□□□□ 0.69
COL13A1-201ENST00000354547 MAGEH1Q9H213 219 aa19.37■□□□□ 0.69
COL13A1-201ENST00000354547 SMPD4Q9NXE4 827 aa19.37■□□□□ 0.69
COL13A1-201ENST00000354547 EVLQ9UI08 416 aaPredicted RBP19.37■□□□□ 0.69
COL13A1-201ENST00000354547 SLC38A8A6NNN8 435 aa19.37■□□□□ 0.69
COL13A1-201ENST00000354547 CNPP09543 421 aaKnown RBP19.37■□□□□ 0.69
COL13A1-201ENST00000354547 PCNAP12004 261 aa19.37■□□□□ 0.69
COL13A1-201ENST00000354547 MERTKQ12866 999 aa19.37■□□□□ 0.69
COL13A1-201ENST00000354547 BNIP2Q12982 314 aa19.37■□□□□ 0.69
COL13A1-201ENST00000354547 LRRC23Q53EV4 343 aaPredicted RBP19.37■□□□□ 0.69
COL13A1-201ENST00000354547 CHST15Q7LFX5 561 aaPredicted RBP19.37■□□□□ 0.69
COL13A1-201ENST00000354547 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.37■□□□□ 0.69
COL13A1-201ENST00000354547 RNF145Q96MT1 663 aa19.37■□□□□ 0.69
COL13A1-201ENST00000354547 PLEKHG4BQ96PX9 1271 aa19.37■□□□□ 0.69
COL13A1-201ENST00000354547 TDRD1Q9BXT4 1180 aaKnown RBP19.37■□□□□ 0.69
COL13A1-201ENST00000354547 SLC52A3Q9NQ40 469 aa19.37■□□□□ 0.69
COL13A1-201ENST00000354547 AIG1Q9NVV5 245 aa19.37■□□□□ 0.69
COL13A1-201ENST00000354547 DNMT3LQ9UJW3 386 aa19.37■□□□□ 0.69
COL13A1-201ENST00000354547 KLKB1P03952 638 aa19.36■□□□□ 0.69
COL13A1-201ENST00000354547 RPLP2P05387 115 aaKnown RBP19.36■□□□□ 0.69
COL13A1-201ENST00000354547 YAP1P46937 504 aaKnown RBP19.36■□□□□ 0.69
COL13A1-201ENST00000354547 SLC11A1P49279 550 aa19.36■□□□□ 0.69
COL13A1-201ENST00000354547 SLC11A2P49281 568 aa19.36■□□□□ 0.69
COL13A1-201ENST00000354547 DGKQP52824 942 aa19.36■□□□□ 0.69
COL13A1-201ENST00000354547 ACLYP53396 1101 aa19.36■□□□□ 0.69
COL13A1-201ENST00000354547 RNF219Q5W0B1 726 aaPredicted RBP19.36■□□□□ 0.69
COL13A1-201ENST00000354547 LCN8Q6JVE9 175 aa19.36■□□□□ 0.69
COL13A1-201ENST00000354547 NANOGP8Q6NSW7 305 aa19.36■□□□□ 0.69
COL13A1-201ENST00000354547 IL27RAQ6UWB1 636 aa19.36■□□□□ 0.69
COL13A1-201ENST00000354547 CLVS1Q8IUQ0 354 aaPredicted RBP19.36■□□□□ 0.69
COL13A1-201ENST00000354547 METTL6Q8TCB7 284 aa19.36■□□□□ 0.69
COL13A1-201ENST00000354547 CENPNQ96H22 339 aaPredicted RBP19.36■□□□□ 0.69
COL13A1-201ENST00000354547 DCUN1D5Q9BTE7 237 aa19.36■□□□□ 0.69
COL13A1-201ENST00000354547 NANOGQ9H9S0 305 aa19.36■□□□□ 0.69
COL13A1-201ENST00000354547 NMRK2Q9NPI5 230 aa19.36■□□□□ 0.69
COL13A1-201ENST00000354547 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.36■□□□□ 0.69
COL13A1-201ENST00000354547 UROSP10746 265 aa19.36■□□□□ 0.69
COL13A1-201ENST00000354547 RING1Q06587 406 aa19.36■□□□□ 0.69
COL13A1-201ENST00000354547 TNK2Q07912 1038 aa19.36■□□□□ 0.69
COL13A1-201ENST00000354547 ZNF177Q13360 481 aaPredicted RBP19.36■□□□□ 0.69
COL13A1-201ENST00000354547 CCSAPQ6IQ19 270 aaPredicted RBP19.36■□□□□ 0.69
COL13A1-201ENST00000354547 NKAPQ8N5F7 415 aaKnown RBP19.36■□□□□ 0.69
COL13A1-201ENST00000354547 OR56A4Q8NGH8 313 aa19.36■□□□□ 0.69
COL13A1-201ENST00000354547 EZH1Q92800 747 aaPredicted RBP19.36■□□□□ 0.69
COL13A1-201ENST00000354547 PEX13Q92968 403 aa19.36■□□□□ 0.69
COL13A1-201ENST00000354547 MYRFLQ96LU7 910 aa19.36■□□□□ 0.69
COL13A1-201ENST00000354547 A8MX80 341 aa19.35■□□□□ 0.69
COL13A1-201ENST00000354547 ANKRD66B4E2M5 251 aa19.35■□□□□ 0.69
COL13A1-201ENST00000354547 PRAMEF12O95522 483 aa19.35■□□□□ 0.69
COL13A1-201ENST00000354547 TSPAN12O95859 305 aa19.35■□□□□ 0.69
COL13A1-201ENST00000354547 MTPNP58546 118 aa19.35■□□□□ 0.69
COL13A1-201ENST00000354547 GPR17Q13304 367 aa19.35■□□□□ 0.69
COL13A1-201ENST00000354547 ZIK1Q3SY52 487 aaPredicted RBP19.35■□□□□ 0.69
COL13A1-201ENST00000354547 C6orf136Q5SQH8 315 aa19.35■□□□□ 0.69
COL13A1-201ENST00000354547 FUT10Q6P4F1 479 aa19.35■□□□□ 0.69
COL13A1-201ENST00000354547 FRA10AC1Q70Z53 315 aa19.35■□□□□ 0.69
COL13A1-201ENST00000354547 TRPV3Q8NET8 790 aa19.35■□□□□ 0.69
COL13A1-201ENST00000354547 CD200R1Q8TD46 325 aa19.35■□□□□ 0.69
COL13A1-201ENST00000354547 WBP2Q969T9 261 aa19.35■□□□□ 0.69
COL13A1-201ENST00000354547 HSFX1Q9UBD0 423 aa19.35■□□□□ 0.69
COL13A1-201ENST00000354547 PCDHB9Q9Y5E1 797 aa19.35■□□□□ 0.69
COL13A1-201ENST00000354547 OR6C75A6NL08 312 aa19.35■□□□□ 0.69
COL13A1-201ENST00000354547 TMEM189-UBE2V1I3L0A0 370 aa19.35■□□□□ 0.69
COL13A1-201ENST00000354547 CLOCKO15516 846 aa19.35■□□□□ 0.69
COL13A1-201ENST00000354547 TMCC1O94876 653 aa19.35■□□□□ 0.69
COL13A1-201ENST00000354547 CAPN1P07384 714 aa19.35■□□□□ 0.69
COL13A1-201ENST00000354547 CORO1AP31146 461 aaKnown RBP19.35■□□□□ 0.69
COL13A1-201ENST00000354547 SH3BGRP55822 239 aaPredicted RBP19.35■□□□□ 0.69
COL13A1-201ENST00000354547 OR4D2P58180 307 aa19.35■□□□□ 0.69
COL13A1-201ENST00000354547 ERVPABLB-1P60509 514 aa19.35■□□□□ 0.69
COL13A1-201ENST00000354547 RCAN2Q14206 197 aa19.35■□□□□ 0.69
COL13A1-201ENST00000354547 TGFBIQ15582 683 aa19.35■□□□□ 0.69
COL13A1-201ENST00000354547 ADRM1Q16186 407 aa19.35■□□□□ 0.69
COL13A1-201ENST00000354547 LETMD1Q6P1Q0 360 aa19.35■□□□□ 0.69
COL13A1-201ENST00000354547 SAPCD2Q86UD0 394 aa19.35■□□□□ 0.69
COL13A1-201ENST00000354547 PCSK9Q8NBP7 692 aaKnown RBP19.35■□□□□ 0.69
COL13A1-201ENST00000354547 ATXN10Q9UBB4 475 aa19.35■□□□□ 0.69
COL13A1-201ENST00000354547 SLC8A2Q9UPR5 921 aa19.35■□□□□ 0.69
COL13A1-201ENST00000354547 ZFP36L2P47974 494 aaKnown RBP19.35■□□□□ 0.69
COL13A1-201ENST00000354547 CCT8P50990 548 aa19.35■□□□□ 0.69
COL13A1-201ENST00000354547 TRAF2Q12933 501 aa19.35■□□□□ 0.69
COL13A1-201ENST00000354547 TMEM259Q4ZIN3 620 aa19.35■□□□□ 0.69
COL13A1-201ENST00000354547 ATP6AP1LQ52LC2 224 aa19.35■□□□□ 0.69
COL13A1-201ENST00000354547 RPF2Q9H7B2 306 aaKnown RBP19.35■□□□□ 0.69
COL13A1-201ENST00000354547 THEGQ9P2T0 379 aa19.35■□□□□ 0.69
COL13A1-201ENST00000354547 PADI4Q9UM07 663 aa19.35■□□□□ 0.69
COL13A1-201ENST00000354547 ALPIP09923 528 aa19.34■□□□□ 0.69
COL13A1-201ENST00000354547 CDK4P11802 303 aa19.34■□□□□ 0.69
COL13A1-201ENST00000354547 FAM26DQ5JW98 314 aa19.34■□□□□ 0.69
COL13A1-201ENST00000354547 ATXN7L2Q5T6C5 722 aaPredicted RBP19.34■□□□□ 0.69
COL13A1-201ENST00000354547 SPATA19Q7Z5L4 167 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms