RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 NCALDP61601 193 aa8.19□□□□□ -1.1
CD44-205ENST00000352818 ACVR1Q04771 509 aa8.19□□□□□ -1.1
CD44-205ENST00000352818 SLC10A7Q0GE19 358 aa8.19□□□□□ -1.1
CD44-205ENST00000352818 MSLNQ13421 630 aaPredicted RBP8.19□□□□□ -1.1
CD44-205ENST00000352818 LBRQ14739 615 aaKnown RBP8.19□□□□□ -1.1
CD44-205ENST00000352818 HSP90AA5PQ58FG0 334 aa8.19□□□□□ -1.1
CD44-205ENST00000352818 CDCP2Q5VXM1 449 aa8.19□□□□□ -1.1
CD44-205ENST00000352818 MBLAC2Q68D91 279 aa8.19□□□□□ -1.1
CD44-205ENST00000352818 CCDC91Q7Z6B0 441 aa8.19□□□□□ -1.1
CD44-205ENST00000352818 ZC3HC1Q86WB0 502 aaKnown RBP8.19□□□□□ -1.1
CD44-205ENST00000352818 NUDCD3Q8IVD9 361 aa8.19□□□□□ -1.1
CD44-205ENST00000352818 LMNTD2Q8IXW0 634 aa8.19□□□□□ -1.1
CD44-205ENST00000352818 LGI2Q8N0V4 545 aa8.19□□□□□ -1.1
CD44-205ENST00000352818 BBS5Q8N3I7 341 aa8.19□□□□□ -1.1
CD44-205ENST00000352818 FITM2Q8N6M3 262 aa8.19□□□□□ -1.1
CD44-205ENST00000352818 ARL14EPQ8N8R7 260 aaPredicted RBP8.19□□□□□ -1.1
CD44-205ENST00000352818 C2CD4AQ8NCU7 369 aaPredicted RBP8.19□□□□□ -1.1
CD44-205ENST00000352818 ARMC2Q8NEN0 867 aa8.19□□□□□ -1.1
CD44-205ENST00000352818 OR6Y1Q8NGX8 325 aa8.19□□□□□ -1.1
CD44-205ENST00000352818 RDH11Q8TC12 318 aa8.19□□□□□ -1.1
CD44-205ENST00000352818 CALML6Q8TD86 181 aa8.19□□□□□ -1.1
CD44-205ENST00000352818 SAP25Q8TEE9 199 aa8.19□□□□□ -1.1
CD44-205ENST00000352818 NANOS1Q8WY41 292 aaKnown RBP8.19□□□□□ -1.1
CD44-205ENST00000352818 MRPS31Q92665 395 aaKnown RBP8.19□□□□□ -1.1
CD44-205ENST00000352818 PRR11Q96HE9 360 aaPredicted RBP8.19□□□□□ -1.1
CD44-205ENST00000352818 VPS39Q96JC1 886 aa8.19□□□□□ -1.1
CD44-205ENST00000352818 FEM1CQ96JP0 617 aa8.19□□□□□ -1.1
CD44-205ENST00000352818 GABRG3Q99928 467 aa8.19□□□□□ -1.1
CD44-205ENST00000352818 APOL2Q9BQE5 337 aa8.19□□□□□ -1.1
CD44-205ENST00000352818 MGME1Q9BQP7 344 aa8.19□□□□□ -1.1
CD44-205ENST00000352818 KLF16Q9BXK1 252 aaPredicted RBP8.19□□□□□ -1.1
CD44-205ENST00000352818 SLC13A1Q9BZW2 595 aa8.19□□□□□ -1.1
CD44-205ENST00000352818 POLR1EQ9GZS1 481 aaKnown RBP8.19□□□□□ -1.1
CD44-205ENST00000352818 C12orf65Q9H3J6 166 aaKnown RBP8.19□□□□□ -1.1
CD44-205ENST00000352818 FAM96AQ9H5X1 160 aa8.19□□□□□ -1.1
CD44-205ENST00000352818 STN1Q9H668 368 aaKnown RBP8.19□□□□□ -1.1
CD44-205ENST00000352818 TRPC7Q9HCX4 862 aa8.19□□□□□ -1.1
CD44-205ENST00000352818 TM9SF3Q9HD45 589 aa8.19□□□□□ -1.1
CD44-205ENST00000352818 NT5MQ9NPB1 228 aa8.19□□□□□ -1.1
CD44-205ENST00000352818 TXLNGQ9NUQ3 528 aa8.19□□□□□ -1.1
CD44-205ENST00000352818 UBP1Q9NZI7 540 aa8.19□□□□□ -1.1
CD44-205ENST00000352818 SLC17A6Q9P2U8 582 aa8.19□□□□□ -1.1
CD44-205ENST00000352818 MAGED2Q9UNF1 606 aaPredicted RBP8.19□□□□□ -1.1
CD44-205ENST00000352818 CHKBQ9Y259 395 aa8.19□□□□□ -1.1
CD44-205ENST00000352818 MTO1Q9Y2Z2 717 aaKnown RBP8.19□□□□□ -1.1
CD44-205ENST00000352818 CAPN7Q9Y6W3 813 aa8.19□□□□□ -1.1
CD44-205ENST00000352818 ARID1BQ8NFD5 2236 aaPredicted RBP8.19□□□□□ -1.1
CD44-205ENST00000352818 TMEM131Q92545 1883 aa8.19□□□□□ -1.1
CD44-205ENST00000352818 NIPBLQ6KC79 2804 aaeCLIP8.19□□□□□ -1.1
CD44-205ENST00000352818 ANKHD1Q8IWZ3 2542 aaKnown RBP8.18□□□□□ -1.1
CD44-205ENST00000352818 A0A1B0GVM2 712 aa8.18□□□□□ -1.1
CD44-205ENST00000352818 A1L4Q6 167 aa8.18□□□□□ -1.1
CD44-205ENST00000352818 WDR91A4D1P6 747 aa8.18□□□□□ -1.1
CD44-205ENST00000352818 TCAF2A6NFQ2 919 aa8.18□□□□□ -1.1
CD44-205ENST00000352818 WASH3PC4AMC7 463 aa8.18□□□□□ -1.1
CD44-205ENST00000352818 KDELR3O43731 214 aa8.18□□□□□ -1.1
CD44-205ENST00000352818 ABCB7O75027 752 aa8.18□□□□□ -1.1
CD44-205ENST00000352818 PMPCBO75439 489 aa8.18□□□□□ -1.1
CD44-205ENST00000352818 RASSF9O75901 435 aa8.18□□□□□ -1.1
CD44-205ENST00000352818 UNC5CO95185 931 aa8.18□□□□□ -1.1
CD44-205ENST00000352818 SERPINE1P05121 402 aa8.18□□□□□ -1.1
CD44-205ENST00000352818 DLDP09622 509 aaKnown RBP8.18□□□□□ -1.1
CD44-205ENST00000352818 FGF3P11487 239 aaPredicted RBP8.18□□□□□ -1.1
CD44-205ENST00000352818 NEFHP12036 1026 aa8.18□□□□□ -1.1
CD44-205ENST00000352818 TPH1P17752 444 aa8.18□□□□□ -1.1
CD44-205ENST00000352818 PFKLP17858 780 aa8.18□□□□□ -1.1
CD44-205ENST00000352818 ARNTP27540 789 aa8.18□□□□□ -1.1
CD44-205ENST00000352818 TYK2P29597 1187 aa8.18□□□□□ -1.1
CD44-205ENST00000352818 CORO1AP31146 461 aaKnown RBP8.18□□□□□ -1.1
CD44-205ENST00000352818 SLC6A4P31645 630 aa8.18□□□□□ -1.1
CD44-205ENST00000352818 CD86P42081 329 aa8.18□□□□□ -1.1
CD44-205ENST00000352818 SERPINH1P50454 418 aaKnown RBP8.18□□□□□ -1.1
CD44-205ENST00000352818 PRKAA2P54646 552 aa8.18□□□□□ -1.1
CD44-205ENST00000352818 TMPRSS15P98073 1019 aa8.18□□□□□ -1.1
CD44-205ENST00000352818 DSC2Q02487 901 aa8.18□□□□□ -1.1
CD44-205ENST00000352818 GNA12Q03113 381 aa8.18□□□□□ -1.1
CD44-205ENST00000352818 NSUN2Q08J23 767 aaKnown RBP eCLIP8.18□□□□□ -1.1
CD44-205ENST00000352818 BST1Q10588 318 aa8.18□□□□□ -1.1
CD44-205ENST00000352818 ZNF235Q14590 738 aa8.18□□□□□ -1.1
CD44-205ENST00000352818 PCLAFQ15004 111 aa8.18□□□□□ -1.1
CD44-205ENST00000352818 TSTD2Q5T7W7 516 aa8.18□□□□□ -1.1
CD44-205ENST00000352818 KIAA1324Q6UXG2 1013 aaKnown RBP8.18□□□□□ -1.1
CD44-205ENST00000352818 ASRGL1Q7L266 308 aa8.18□□□□□ -1.1
CD44-205ENST00000352818 KANSL1Q7Z3B3 1105 aa8.18□□□□□ -1.1
CD44-205ENST00000352818 METTL3Q86U44 580 aaKnown RBP8.18□□□□□ -1.1
CD44-205ENST00000352818 FAM217AQ8IXS0 508 aa8.18□□□□□ -1.1
CD44-205ENST00000352818 PGBD5Q8N414 524 aa8.18□□□□□ -1.1
CD44-205ENST00000352818 EID2Q8N6I1 236 aa8.18□□□□□ -1.1
CD44-205ENST00000352818 KCNV2Q8TDN2 545 aa8.18□□□□□ -1.1
CD44-205ENST00000352818 SCG3Q8WXD2 468 aaKnown RBP8.18□□□□□ -1.1
CD44-205ENST00000352818 STON2Q8WXE9 905 aa8.18□□□□□ -1.1
CD44-205ENST00000352818 SKA1Q96BD8 255 aa8.18□□□□□ -1.1
CD44-205ENST00000352818 MYEOVQ96EZ4 313 aa8.18□□□□□ -1.1
CD44-205ENST00000352818 PRICKLE1Q96MT3 831 aaPredicted RBP8.18□□□□□ -1.1
CD44-205ENST00000352818 LRRC37BQ96QE4 947 aa8.18□□□□□ -1.1
CD44-205ENST00000352818 AGAP2Q99490 1192 aa8.18□□□□□ -1.1
CD44-205ENST00000352818 TUBB6Q9BUF5 446 aa8.18□□□□□ -1.1
CD44-205ENST00000352818 MKRN2Q9H000 416 aaKnown RBP8.18□□□□□ -1.1
CD44-205ENST00000352818 SLC25A18Q9H1K4 315 aa8.18□□□□□ -1.1
CD44-205ENST00000352818 MYLK2Q9H1R3 596 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms