RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 AQP1P29972 269 aa13.58□□□□□ -0.24
SMC6-201ENST00000351948 WDR5P61964 334 aaKnown RBP13.58□□□□□ -0.24
SMC6-201ENST00000351948 UBE3AQ05086 875 aa13.58□□□□□ -0.24
SMC6-201ENST00000351948 RBM20Q5T481 1227 aaKnown RBP13.58□□□□□ -0.24
SMC6-201ENST00000351948 CAMKK1Q8N5S9 505 aa13.58□□□□□ -0.24
SMC6-201ENST00000351948 EQTNQ9NQ60 294 aa13.58□□□□□ -0.24
SMC6-201ENST00000351948 SAR1AQ9NR31 198 aa13.58□□□□□ -0.24
SMC6-201ENST00000351948 ATAD3AQ9NVI7 634 aa13.58□□□□□ -0.24
SMC6-201ENST00000351948 TMEM248Q9NWD8 314 aa13.58□□□□□ -0.24
SMC6-201ENST00000351948 RGSL1A5PLK6 1076 aa13.58□□□□□ -0.24
SMC6-201ENST00000351948 SLC28A1O00337 649 aa13.58□□□□□ -0.24
SMC6-201ENST00000351948 HS6ST1O60243 411 aa13.58□□□□□ -0.24
SMC6-201ENST00000351948 GUCY1B2O75343 617 aa13.58□□□□□ -0.24
SMC6-201ENST00000351948 NRF1Q16656 503 aa13.58□□□□□ -0.24
SMC6-201ENST00000351948 CAPRIN2Q6IMN6 1127 aaKnown RBP13.58□□□□□ -0.24
SMC6-201ENST00000351948 VN1R5Q7Z5H4 357 aa13.58□□□□□ -0.24
SMC6-201ENST00000351948 IGDCC3Q8IVU1 814 aa13.58□□□□□ -0.24
SMC6-201ENST00000351948 PRSS58Q8IYP2 241 aa13.58□□□□□ -0.24
SMC6-201ENST00000351948 MYCBPQ99417 103 aaPredicted RBP13.58□□□□□ -0.24
SMC6-201ENST00000351948 MCMBPQ9BTE3 642 aa13.58□□□□□ -0.24
SMC6-201ENST00000351948 CDV3Q9UKY7 258 aaKnown RBP13.58□□□□□ -0.24
SMC6-201ENST00000351948 A0A0G2JN53 185 aa13.58□□□□□ -0.24
SMC6-201ENST00000351948 H3BN98 237 aa13.58□□□□□ -0.24
SMC6-201ENST00000351948 SIN3BO75182 1162 aa13.58□□□□□ -0.24
SMC6-201ENST00000351948 UNC5CO95185 931 aa13.58□□□□□ -0.24
SMC6-201ENST00000351948 PGGT1BP53609 377 aa13.58□□□□□ -0.24
SMC6-201ENST00000351948 RGS1Q08116 209 aa13.58□□□□□ -0.24
SMC6-201ENST00000351948 MRPL10Q7Z7H8 261 aaKnown RBP13.58□□□□□ -0.24
SMC6-201ENST00000351948 EBPLQ9BY08 206 aa13.58□□□□□ -0.24
SMC6-201ENST00000351948 ZNF180Q9UJW8 692 aa13.58□□□□□ -0.24
SMC6-201ENST00000351948 RFXANKO14593 260 aa13.58□□□□□ -0.24
SMC6-201ENST00000351948 PRAMEF11O60813 436 aa13.58□□□□□ -0.24
SMC6-201ENST00000351948 CAPN1P07384 714 aa13.58□□□□□ -0.24
SMC6-201ENST00000351948 CHRNGP07510 517 aa13.58□□□□□ -0.24
SMC6-201ENST00000351948 ATP6V1C1P21283 382 aa13.58□□□□□ -0.24
SMC6-201ENST00000351948 GPX6P59796 221 aa13.58□□□□□ -0.24
SMC6-201ENST00000351948 SKP1P63208 163 aa13.58□□□□□ -0.24
SMC6-201ENST00000351948 IL5RAQ01344 420 aa13.58□□□□□ -0.24
SMC6-201ENST00000351948 LMAN2Q12907 356 aa13.58□□□□□ -0.24
SMC6-201ENST00000351948 PRMT9Q6P2P2 845 aa13.58□□□□□ -0.24
SMC6-201ENST00000351948 PAGE2Q7Z2X7 111 aa13.58□□□□□ -0.24
SMC6-201ENST00000351948 SNX20Q7Z614 316 aa13.58□□□□□ -0.24
SMC6-201ENST00000351948 PPM1MQ96MI6 270 aa13.58□□□□□ -0.24
SMC6-201ENST00000351948 ZNF599Q96NL3 588 aa13.58□□□□□ -0.24
SMC6-201ENST00000351948 SLC2A13Q96QE2 648 aa13.58□□□□□ -0.24
SMC6-201ENST00000351948 FAIM2Q9BWQ8 316 aa13.58□□□□□ -0.24
SMC6-201ENST00000351948 ARL8BQ9NVJ2 186 aa13.58□□□□□ -0.24
SMC6-201ENST00000351948 ADPRHL2Q9NX46 363 aa13.58□□□□□ -0.24
SMC6-201ENST00000351948 LEF1Q9UJU2 399 aaPredicted RBP13.58□□□□□ -0.24
SMC6-201ENST00000351948 SCN9AQ15858 1988 aa13.57□□□□□ -0.24
SMC6-201ENST00000351948 FPGTO14772 594 aa13.57□□□□□ -0.24
SMC6-201ENST00000351948 BMP10O95393 424 aa13.57□□□□□ -0.24
SMC6-201ENST00000351948 LDLRP01130 860 aa13.57□□□□□ -0.24
SMC6-201ENST00000351948 PSMC3P17980 439 aa13.57□□□□□ -0.24
SMC6-201ENST00000351948 ACAP2Q15057 778 aa13.57□□□□□ -0.24
SMC6-201ENST00000351948 SLC30A9Q6PML9 568 aa13.57□□□□□ -0.24
SMC6-201ENST00000351948 WDR26Q9H7D7 661 aa13.57□□□□□ -0.24
SMC6-201ENST00000351948 MTF2Q9Y483 593 aaPredicted RBP13.57□□□□□ -0.24
SMC6-201ENST00000351948 OR10H1Q9Y4A9 318 aa13.57□□□□□ -0.24
SMC6-201ENST00000351948 H3BQ06 376 aaPredicted RBP13.57□□□□□ -0.24
SMC6-201ENST00000351948 KDELR3O43731 214 aa13.57□□□□□ -0.24
SMC6-201ENST00000351948 PFDN1O60925 122 aa13.57□□□□□ -0.24
SMC6-201ENST00000351948 AHSGP02765 367 aa13.57□□□□□ -0.24
SMC6-201ENST00000351948 SLC7A2P52569 658 aa13.57□□□□□ -0.24
SMC6-201ENST00000351948 C16orf87Q6PH81 154 aa13.57□□□□□ -0.24
SMC6-201ENST00000351948 ZYG11AQ6WRX3 759 aa13.57□□□□□ -0.24
SMC6-201ENST00000351948 Q6ZVL8 140 aa13.57□□□□□ -0.24
SMC6-201ENST00000351948 MICU2Q8IYU8 434 aa13.57□□□□□ -0.24
SMC6-201ENST00000351948 ZCCHC10Q8TBK6 192 aa13.57□□□□□ -0.24
SMC6-201ENST00000351948 MTERF1Q99551 399 aaKnown RBP13.57□□□□□ -0.24
SMC6-201ENST00000351948 IL12RB2Q99665 862 aa13.57□□□□□ -0.24
SMC6-201ENST00000351948 KLHL4Q9C0H6 718 aa13.57□□□□□ -0.24
SMC6-201ENST00000351948 MYH4Q9Y623 1939 aa13.57□□□□□ -0.24
SMC6-201ENST00000351948 TIAM2Q8IVF5 1701 aa13.57□□□□□ -0.24
SMC6-201ENST00000351948 FANCGO15287 622 aa13.57□□□□□ -0.24
SMC6-201ENST00000351948 SLC22A3O75751 556 aa13.57□□□□□ -0.24
SMC6-201ENST00000351948 STATHP02808 62 aa13.57□□□□□ -0.24
SMC6-201ENST00000351948 COL6A2P12110 1019 aa13.57□□□□□ -0.24
SMC6-201ENST00000351948 DDX6P26196 483 aaKnown RBP eCLIP13.57□□□□□ -0.24
SMC6-201ENST00000351948 CLDN10P78369 228 aa13.57□□□□□ -0.24
SMC6-201ENST00000351948 ZNF252P-AS1Q0IIN9 211 aa13.57□□□□□ -0.24
SMC6-201ENST00000351948 GTF2H2Q13888 395 aa13.57□□□□□ -0.24
SMC6-201ENST00000351948 GPAT3Q53EU6 434 aa13.57□□□□□ -0.24
SMC6-201ENST00000351948 ZCCHC8Q6NZY4 707 aaKnown RBP13.57□□□□□ -0.24
SMC6-201ENST00000351948 GTF2H2CQ6P1K8 395 aa13.57□□□□□ -0.24
SMC6-201ENST00000351948 GATAD2AQ86YP4 633 aa13.57□□□□□ -0.24
SMC6-201ENST00000351948 DCAF4L2Q8NA75 395 aa13.57□□□□□ -0.24
SMC6-201ENST00000351948 OSCP1Q8WVF1 389 aa13.57□□□□□ -0.24
SMC6-201ENST00000351948 PROX1Q92786 737 aa13.57□□□□□ -0.24
SMC6-201ENST00000351948 TMEM98Q9Y2Y6 226 aa13.57□□□□□ -0.24
SMC6-201ENST00000351948 ACTL7AQ9Y615 435 aa13.57□□□□□ -0.24
SMC6-201ENST00000351948 A0A0J9YYE9 177 aa13.57□□□□□ -0.24
SMC6-201ENST00000351948 HAS3O00219 553 aa13.57□□□□□ -0.24
SMC6-201ENST00000351948 FKBP6O75344 327 aa13.57□□□□□ -0.24
SMC6-201ENST00000351948 SERPINA6P08185 405 aa13.57□□□□□ -0.24
SMC6-201ENST00000351948 CSTF3Q12996 717 aaKnown RBP13.57□□□□□ -0.24
SMC6-201ENST00000351948 TMEM79Q9BSE2 394 aa13.57□□□□□ -0.24
SMC6-201ENST00000351948 FEM1AQ9BSK4 669 aa13.57□□□□□ -0.24
SMC6-201ENST00000351948 SPHK2Q9NRA0 654 aa13.57□□□□□ -0.24
SMC6-201ENST00000351948 TMCO1Q9UM00 188 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms