RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 GNPTGQ9UJJ9 305 aa6.85□□□□□ -1.31
TRIM55-203ENST00000350034 TMPRSS11EQ9UL52 423 aa6.85□□□□□ -1.31
TRIM55-203ENST00000350034 RNF112Q9ULX5 631 aa6.85□□□□□ -1.31
TRIM55-203ENST00000350034 PRSS21Q9Y6M0 314 aa6.85□□□□□ -1.31
TRIM55-203ENST00000350034 A0A088AWK7 358 aa6.84□□□□□ -1.31
TRIM55-203ENST00000350034 RGSL1A5PLK6 1076 aa6.84□□□□□ -1.31
TRIM55-203ENST00000350034 LRRC14BA6NHZ5 514 aa6.84□□□□□ -1.31
TRIM55-203ENST00000350034 IQCF5A8MTL0 148 aa6.84□□□□□ -1.31
TRIM55-203ENST00000350034 TTC34A8MYJ7 566 aa6.84□□□□□ -1.31
TRIM55-203ENST00000350034 SUPT3HB4E1H0 165 aa6.84□□□□□ -1.31
TRIM55-203ENST00000350034 BTN3A1O00481 513 aa6.84□□□□□ -1.31
TRIM55-203ENST00000350034 PPP6CO00743 305 aa6.84□□□□□ -1.31
TRIM55-203ENST00000350034 NEMP1O14524 444 aa6.84□□□□□ -1.31
TRIM55-203ENST00000350034 CCNT2O60583 730 aaKnown RBP6.84□□□□□ -1.31
TRIM55-203ENST00000350034 SUPT3HO75486 399 aa6.84□□□□□ -1.31
TRIM55-203ENST00000350034 SIX3O95343 332 aaPredicted RBP6.84□□□□□ -1.31
TRIM55-203ENST00000350034 ADH1CP00326 375 aa6.84□□□□□ -1.31
TRIM55-203ENST00000350034 UGT2B4P06133 528 aa6.84□□□□□ -1.31
TRIM55-203ENST00000350034 CTSLP07711 333 aa6.84□□□□□ -1.31
TRIM55-203ENST00000350034 THRAP10827 490 aa6.84□□□□□ -1.31
TRIM55-203ENST00000350034 ADH5P11766 374 aa6.84□□□□□ -1.31
TRIM55-203ENST00000350034 GFAPP14136 432 aa6.84□□□□□ -1.31
TRIM55-203ENST00000350034 CD1EP15812 388 aa6.84□□□□□ -1.31
TRIM55-203ENST00000350034 TIMP2P16035 220 aa6.84□□□□□ -1.31
TRIM55-203ENST00000350034 ZNF30P17039 623 aa6.84□□□□□ -1.31
TRIM55-203ENST00000350034 UGT1A6P19224 532 aa6.84□□□□□ -1.31
TRIM55-203ENST00000350034 CHRM3P20309 590 aa6.84□□□□□ -1.31
TRIM55-203ENST00000350034 ITGAXP20702 1163 aa6.84□□□□□ -1.31
TRIM55-203ENST00000350034 UGT1A1P22309 533 aa6.84□□□□□ -1.31
TRIM55-203ENST00000350034 UGT1A4P22310 534 aa6.84□□□□□ -1.31
TRIM55-203ENST00000350034 EEF1DP29692 281 aaKnown RBP6.84□□□□□ -1.31
TRIM55-203ENST00000350034 VIPR1P32241 457 aa6.84□□□□□ -1.31
TRIM55-203ENST00000350034 UGT1A3P35503 534 aa6.84□□□□□ -1.31
TRIM55-203ENST00000350034 UGT1A5P35504 534 aa6.84□□□□□ -1.31
TRIM55-203ENST00000350034 VIPR2P41587 438 aa6.84□□□□□ -1.31
TRIM55-203ENST00000350034 DGKGP49619 791 aa6.84□□□□□ -1.31
TRIM55-203ENST00000350034 ATP4BP51164 291 aa6.84□□□□□ -1.31
TRIM55-203ENST00000350034 CDH13P55290 713 aa6.84□□□□□ -1.31
TRIM55-203ENST00000350034 DCDC1P59894 354 aa6.84□□□□□ -1.31
TRIM55-203ENST00000350034 POLR2LP62875 67 aaKnown RBP6.84□□□□□ -1.31
TRIM55-203ENST00000350034 B4GALNT1Q00973 533 aa6.84□□□□□ -1.31
TRIM55-203ENST00000350034 CLCQ05315 142 aa6.84□□□□□ -1.31
TRIM55-203ENST00000350034 RALGDSQ12967 914 aa6.84□□□□□ -1.31
TRIM55-203ENST00000350034 CDC16Q13042 620 aa6.84□□□□□ -1.31
TRIM55-203ENST00000350034 LCP2Q13094 533 aa6.84□□□□□ -1.31
TRIM55-203ENST00000350034 COL9A2Q14055 689 aaPredicted RBP6.84□□□□□ -1.31
TRIM55-203ENST00000350034 PTK2BQ14289 1009 aa6.84□□□□□ -1.31
TRIM55-203ENST00000350034 GBX1Q14549 363 aa6.84□□□□□ -1.31
TRIM55-203ENST00000350034 PCBP2Q15366 365 aaKnown RBP eCLIP6.84□□□□□ -1.31
TRIM55-203ENST00000350034 PDCD2Q16342 344 aaPredicted RBP6.84□□□□□ -1.31
TRIM55-203ENST00000350034 PFKFB4Q16877 469 aa6.84□□□□□ -1.31
TRIM55-203ENST00000350034 ACCSLQ4AC99 568 aa6.84□□□□□ -1.31
TRIM55-203ENST00000350034 TCEAL5Q5H9L2 206 aa6.84□□□□□ -1.31
TRIM55-203ENST00000350034 FAM78AQ5JUQ0 283 aa6.84□□□□□ -1.31
TRIM55-203ENST00000350034 TMEM198Q66K66 360 aa6.84□□□□□ -1.31
TRIM55-203ENST00000350034 ANKS6Q68DC2 871 aa6.84□□□□□ -1.31
TRIM55-203ENST00000350034 PTRHD1Q6GMV3 140 aaKnown RBP6.84□□□□□ -1.31
TRIM55-203ENST00000350034 SBSNQ6UWP8 590 aa6.84□□□□□ -1.31
TRIM55-203ENST00000350034 TMEM184AQ6ZMB5 413 aa6.84□□□□□ -1.31
TRIM55-203ENST00000350034 RFLNAQ6ZTI6 216 aa6.84□□□□□ -1.31
TRIM55-203ENST00000350034 LARP4Q71RC2 724 aaKnown RBP eCLIP6.84□□□□□ -1.31
TRIM55-203ENST00000350034 RPS27LQ71UM5 84 aaKnown RBP6.84□□□□□ -1.31
TRIM55-203ENST00000350034 RBM23Q86U06 439 aaKnown RBP6.84□□□□□ -1.31
TRIM55-203ENST00000350034 C12orf40Q86WS4 652 aa6.84□□□□□ -1.31
TRIM55-203ENST00000350034 GPSM1Q86YR5 675 aa6.84□□□□□ -1.31
TRIM55-203ENST00000350034 PHYKPLQ8IUZ5 450 aa6.84□□□□□ -1.31
TRIM55-203ENST00000350034 POU5F2Q8N7G0 328 aa6.84□□□□□ -1.31
TRIM55-203ENST00000350034 C12orf76Q8N812 135 aaPredicted RBP6.84□□□□□ -1.31
TRIM55-203ENST00000350034 BPIFB1Q8TDL5 484 aa6.84□□□□□ -1.31
TRIM55-203ENST00000350034 CYB5D2Q8WUJ1 264 aa6.84□□□□□ -1.31
TRIM55-203ENST00000350034 SORCS1Q8WY21 1168 aa6.84□□□□□ -1.31
TRIM55-203ENST00000350034 MYLIPQ8WY64 445 aa6.84□□□□□ -1.31
TRIM55-203ENST00000350034 ULK4Q96C45 1275 aa6.84□□□□□ -1.31
TRIM55-203ENST00000350034 ASIC4Q96FT7 647 aa6.84□□□□□ -1.31
TRIM55-203ENST00000350034 KLHL32Q96NJ5 620 aa6.84□□□□□ -1.31
TRIM55-203ENST00000350034 ASB16Q96NS5 453 aa6.84□□□□□ -1.31
TRIM55-203ENST00000350034 GUCD1Q96NT3 240 aa6.84□□□□□ -1.31
TRIM55-203ENST00000350034 NSUN5Q96P11 429 aaKnown RBP6.84□□□□□ -1.31
TRIM55-203ENST00000350034 LENG8Q96PV6 779 aaPredicted RBP6.84□□□□□ -1.31
TRIM55-203ENST00000350034 CDCA3Q99618 268 aaPredicted RBP6.84□□□□□ -1.31
TRIM55-203ENST00000350034 FAM83CQ9BQN1 747 aa6.84□□□□□ -1.31
TRIM55-203ENST00000350034 NUSAP1Q9BXS6 441 aaKnown RBP6.84□□□□□ -1.31
TRIM55-203ENST00000350034 CIPCQ9C0C6 399 aa6.84□□□□□ -1.31
TRIM55-203ENST00000350034 CLPBQ9H078 707 aa6.84□□□□□ -1.31
TRIM55-203ENST00000350034 ZDHHC6Q9H6R6 413 aa6.84□□□□□ -1.31
TRIM55-203ENST00000350034 RNPEPL1Q9HAU8 725 aa6.84□□□□□ -1.31
TRIM55-203ENST00000350034 PIDD1Q9HB75 910 aa6.84□□□□□ -1.31
TRIM55-203ENST00000350034 ZBTB26Q9HCK0 441 aa6.84□□□□□ -1.31
TRIM55-203ENST00000350034 MRGBPQ9NV56 204 aa6.84□□□□□ -1.31
TRIM55-203ENST00000350034 NUDT4Q9NZJ9 180 aa6.84□□□□□ -1.31
TRIM55-203ENST00000350034 CRLS1Q9UJA2 301 aa6.84□□□□□ -1.31
TRIM55-203ENST00000350034 PCTPQ9UKL6 214 aa6.84□□□□□ -1.31
TRIM55-203ENST00000350034 DNAJC15Q9Y5T4 150 aa6.84□□□□□ -1.31
TRIM55-203ENST00000350034 ST14Q9Y5Y6 855 aa6.84□□□□□ -1.31
TRIM55-203ENST00000350034 COPG1Q9Y678 874 aaKnown RBP6.84□□□□□ -1.31
TRIM55-203ENST00000350034 ANKRD36A6QL64 1941 aa6.84□□□□□ -1.32
TRIM55-203ENST00000350034 DNAH12Q6ZR08 3092 aa6.83□□□□□ -1.32
TRIM55-203ENST00000350034 A0A1B0GTL3 188 aa6.83□□□□□ -1.32
TRIM55-203ENST00000350034 UPK3BL1B0FP48 263 aa6.83□□□□□ -1.32
TRIM55-203ENST00000350034 E5RI56 91 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms