RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 HSPA7P48741 367 aa13.77□□□□□ -0.21
TRIM4-201ENST00000349062 GALK1P51570 392 aa13.77□□□□□ -0.21
TRIM4-201ENST00000349062 HERVK_113P63132 956 aa13.77□□□□□ -0.21
TRIM4-201ENST00000349062 BOP1Q14137 746 aaKnown RBP13.77□□□□□ -0.21
TRIM4-201ENST00000349062 TEAD2Q15562 447 aa13.77□□□□□ -0.21
TRIM4-201ENST00000349062 DBN1Q16643 649 aa13.77□□□□□ -0.21
TRIM4-201ENST00000349062 DGKKQ5KSL6 1271 aa13.77□□□□□ -0.21
TRIM4-201ENST00000349062 SETD3Q86TU7 594 aaPredicted RBP13.77□□□□□ -0.21
TRIM4-201ENST00000349062 SLC22A9Q8IVM8 553 aa13.77□□□□□ -0.21
TRIM4-201ENST00000349062 C12orf76Q8N812 135 aaPredicted RBP13.77□□□□□ -0.21
TRIM4-201ENST00000349062 ERVK-6Q9BXR3 956 aa13.77□□□□□ -0.21
TRIM4-201ENST00000349062 STN1Q9H668 368 aaKnown RBP13.77□□□□□ -0.21
TRIM4-201ENST00000349062 LHX3Q9UBR4 397 aa13.77□□□□□ -0.21
TRIM4-201ENST00000349062 PCDHGB4Q9UN71 923 aa13.77□□□□□ -0.21
TRIM4-201ENST00000349062 AURKCQ9UQB9 309 aa13.77□□□□□ -0.21
TRIM4-201ENST00000349062 PCDHGB5Q9Y5G0 923 aa13.77□□□□□ -0.21
TRIM4-201ENST00000349062 COMMD3-BMI1R4GMX3 469 aa13.77□□□□□ -0.21
TRIM4-201ENST00000349062 C15orf38-AP3S2A0A0A6YYH1 394 aa13.77□□□□□ -0.21
TRIM4-201ENST00000349062 MRASO14807 208 aa13.77□□□□□ -0.21
TRIM4-201ENST00000349062 FKBP6O75344 327 aa13.77□□□□□ -0.21
TRIM4-201ENST00000349062 AKT1P31749 480 aa13.77□□□□□ -0.21
TRIM4-201ENST00000349062 HNF1BP35680 557 aa13.77□□□□□ -0.21
TRIM4-201ENST00000349062 COL9A2Q14055 689 aaPredicted RBP13.77□□□□□ -0.21
TRIM4-201ENST00000349062 GK3PQ14409 553 aa13.77□□□□□ -0.21
TRIM4-201ENST00000349062 CHRNA6Q15825 494 aa13.77□□□□□ -0.21
TRIM4-201ENST00000349062 TPGS2Q68CL5 300 aa13.77□□□□□ -0.21
TRIM4-201ENST00000349062 ANKS6Q68DC2 871 aa13.77□□□□□ -0.21
TRIM4-201ENST00000349062 DNAJC14Q6Y2X3 702 aaPredicted RBP13.77□□□□□ -0.21
TRIM4-201ENST00000349062 RNF111Q6ZNA4 994 aa13.77□□□□□ -0.21
TRIM4-201ENST00000349062 ARPINQ7Z6K5 226 aa13.77□□□□□ -0.21
TRIM4-201ENST00000349062 ADGRG2Q8IZP9 1017 aa13.77□□□□□ -0.21
TRIM4-201ENST00000349062 DNAJB14Q8TBM8 379 aa13.77□□□□□ -0.21
TRIM4-201ENST00000349062 ADAMTS19Q8TE59 1207 aa13.77□□□□□ -0.21
TRIM4-201ENST00000349062 CCDC126Q96EE4 140 aa13.77□□□□□ -0.21
TRIM4-201ENST00000349062 RTKNQ9BST9 563 aa13.77□□□□□ -0.21
TRIM4-201ENST00000349062 SYTL2Q9HCH5 934 aa13.77□□□□□ -0.21
TRIM4-201ENST00000349062 ZBTB26Q9HCK0 441 aa13.77□□□□□ -0.21
TRIM4-201ENST00000349062 ASAH2Q9NR71 780 aa13.77□□□□□ -0.21
TRIM4-201ENST00000349062 CHCHD3Q9NX63 227 aaKnown RBP13.77□□□□□ -0.21
TRIM4-201ENST00000349062 TBX21Q9UL17 535 aa13.77□□□□□ -0.21
TRIM4-201ENST00000349062 SORCS3Q9UPU3 1222 aa13.77□□□□□ -0.21
TRIM4-201ENST00000349062 PRSS21Q9Y6M0 314 aa13.77□□□□□ -0.21
TRIM4-201ENST00000349062 MT-ND1P03886 318 aa13.76□□□□□ -0.21
TRIM4-201ENST00000349062 LAG3P18627 525 aa13.76□□□□□ -0.21
TRIM4-201ENST00000349062 RAB33AQ14088 237 aa13.76□□□□□ -0.21
TRIM4-201ENST00000349062 ARHGEF7Q14155 803 aa13.76□□□□□ -0.21
TRIM4-201ENST00000349062 FRG1Q14331 258 aaKnown RBP13.76□□□□□ -0.21
TRIM4-201ENST00000349062 ITIH5Q86UX2 942 aa13.76□□□□□ -0.21
TRIM4-201ENST00000349062 CDC26Q8NHZ8 85 aa13.76□□□□□ -0.21
TRIM4-201ENST00000349062 LKAAEAR1Q8TD35 194 aa13.76□□□□□ -0.21
TRIM4-201ENST00000349062 ZFYVE19Q96K21 471 aa13.76□□□□□ -0.21
TRIM4-201ENST00000349062 ZFRQ96KR1 1074 aaKnown RBP13.76□□□□□ -0.21
TRIM4-201ENST00000349062 LRGUKQ96M69 825 aa13.76□□□□□ -0.21
TRIM4-201ENST00000349062 RANBP9Q96S59 729 aa13.76□□□□□ -0.21
TRIM4-201ENST00000349062 TRAV19A0A0A6YYK7 116 aa13.76□□□□□ -0.21
TRIM4-201ENST00000349062 LEFTY2O00292 366 aa13.76□□□□□ -0.21
TRIM4-201ENST00000349062 NPHS1O60500 1241 aa13.76□□□□□ -0.21
TRIM4-201ENST00000349062 CXCL10P02778 98 aa13.76□□□□□ -0.21
TRIM4-201ENST00000349062 CYBBP04839 570 aa13.76□□□□□ -0.21
TRIM4-201ENST00000349062 MTHFD2P13995 350 aa13.76□□□□□ -0.21
TRIM4-201ENST00000349062 PSME3P61289 254 aa13.76□□□□□ -0.21
TRIM4-201ENST00000349062 AAK1Q2M2I8 961 aa13.76□□□□□ -0.21
TRIM4-201ENST00000349062 C16orf89Q6UX73 402 aa13.76□□□□□ -0.21
TRIM4-201ENST00000349062 PDSS2Q86YH6 399 aa13.76□□□□□ -0.21
TRIM4-201ENST00000349062 CHST14Q8NCH0 376 aa13.76□□□□□ -0.21
TRIM4-201ENST00000349062 MIPOL1Q8TD10 442 aa13.76□□□□□ -0.21
TRIM4-201ENST00000349062 ACTRT2Q8TDY3 377 aa13.76□□□□□ -0.21
TRIM4-201ENST00000349062 VWCEQ96DN2 955 aa13.76□□□□□ -0.21
TRIM4-201ENST00000349062 NSUN3Q9H649 340 aaKnown RBP13.76□□□□□ -0.21
TRIM4-201ENST00000349062 NOL11Q9H8H0 719 aaKnown RBP13.76□□□□□ -0.21
TRIM4-201ENST00000349062 IL21Q9HBE4 155 aa13.76□□□□□ -0.21
TRIM4-201ENST00000349062 FNIP2Q9P278 1114 aa13.76□□□□□ -0.21
TRIM4-201ENST00000349062 LZTS1Q9Y250 596 aa13.76□□□□□ -0.21
TRIM4-201ENST00000349062 CHD9Q3L8U1 2897 aa13.76□□□□□ -0.21
TRIM4-201ENST00000349062 PATJQ8NI35 1801 aa13.76□□□□□ -0.21
TRIM4-201ENST00000349062 ALOX15P16050 662 aaPredicted RBP13.75□□□□□ -0.21
TRIM4-201ENST00000349062 SLC7A2P52569 658 aa13.75□□□□□ -0.21
TRIM4-201ENST00000349062 CHN2P52757 468 aa13.75□□□□□ -0.21
TRIM4-201ENST00000349062 NRF1Q16656 503 aa13.75□□□□□ -0.21
TRIM4-201ENST00000349062 CTSL3PQ5NE16 218 aa13.75□□□□□ -0.21
TRIM4-201ENST00000349062 NCEH1Q6PIU2 408 aa13.75□□□□□ -0.21
TRIM4-201ENST00000349062 RP9Q8TA86 221 aaKnown RBP13.75□□□□□ -0.21
TRIM4-201ENST00000349062 PYCR2Q96C36 320 aa13.75□□□□□ -0.21
TRIM4-201ENST00000349062 ZNF599Q96NL3 588 aa13.75□□□□□ -0.21
TRIM4-201ENST00000349062 SERPINI1Q99574 410 aa13.75□□□□□ -0.21
TRIM4-201ENST00000349062 LIN28AQ9H9Z2 209 aaKnown RBP13.75□□□□□ -0.21
TRIM4-201ENST00000349062 TBC1D30Q9Y2I9 924 aa13.75□□□□□ -0.21
TRIM4-201ENST00000349062 HEMK1Q9Y5R4 338 aaPredicted RBP13.75□□□□□ -0.21
TRIM4-201ENST00000349062 SLCO1B7G3V0H7 640 aa13.75□□□□□ -0.21
TRIM4-201ENST00000349062 PFDN6O15212 129 aa13.75□□□□□ -0.21
TRIM4-201ENST00000349062 MAGEB3O15480 346 aa13.75□□□□□ -0.21
TRIM4-201ENST00000349062 EPOP01588 193 aa13.75□□□□□ -0.21
TRIM4-201ENST00000349062 ALDOCP09972 364 aaKnown RBP13.75□□□□□ -0.21
TRIM4-201ENST00000349062 CR2P20023 1033 aa13.75□□□□□ -0.21
TRIM4-201ENST00000349062 TTPAP49638 278 aa13.75□□□□□ -0.21
TRIM4-201ENST00000349062 LSAMPQ13449 338 aa13.75□□□□□ -0.21
TRIM4-201ENST00000349062 PABPC1LQ4VXU2 614 aaKnown RBP13.75□□□□□ -0.21
TRIM4-201ENST00000349062 ANKRD33Q7Z3H0 272 aa13.75□□□□□ -0.21
TRIM4-201ENST00000349062 AMIGO2Q86SJ2 522 aa13.75□□□□□ -0.21
TRIM4-201ENST00000349062 DDX53Q86TM3 631 aaKnown RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms