RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 GPR33Q49SQ1 333 aa20.14■□□□□ 0.81
CHRNA3-202ENST00000348639 PHYKPLQ8IUZ5 450 aa20.14■□□□□ 0.81
CHRNA3-202ENST00000348639 DDIASQ8IXT1 998 aa20.14■□□□□ 0.81
CHRNA3-202ENST00000348639 ECHDC3Q96DC8 303 aa20.14■□□□□ 0.81
CHRNA3-202ENST00000348639 CCDC97Q96F63 343 aaPredicted RBP20.14■□□□□ 0.81
CHRNA3-202ENST00000348639 SLC25A23Q9BV35 468 aa20.14■□□□□ 0.81
CHRNA3-202ENST00000348639 BOCQ9BWV1 1114 aa20.14■□□□□ 0.81
CHRNA3-202ENST00000348639 CIPCQ9C0C6 399 aa20.14■□□□□ 0.81
CHRNA3-202ENST00000348639 PACSIN3Q9UKS6 424 aa20.14■□□□□ 0.81
CHRNA3-202ENST00000348639 PPIL1Q9Y3C6 166 aa20.14■□□□□ 0.81
CHRNA3-202ENST00000348639 MYOFQ9NZM1 2061 aa20.14■□□□□ 0.81
CHRNA3-202ENST00000348639 A8MX80 341 aa20.14■□□□□ 0.81
CHRNA3-202ENST00000348639 VPS4BO75351 444 aa20.14■□□□□ 0.81
CHRNA3-202ENST00000348639 ESRRBO95718 433 aa20.14■□□□□ 0.81
CHRNA3-202ENST00000348639 EN2P19622 333 aaPredicted RBP20.14■□□□□ 0.81
CHRNA3-202ENST00000348639 PTPN5P54829 565 aa20.14■□□□□ 0.81
CHRNA3-202ENST00000348639 CDC16Q13042 620 aa20.14■□□□□ 0.81
CHRNA3-202ENST00000348639 CEACAM7Q14002 265 aa20.14■□□□□ 0.81
CHRNA3-202ENST00000348639 SLC5A9Q2M3M2 681 aa20.14■□□□□ 0.81
CHRNA3-202ENST00000348639 MMEL1Q495T6 779 aa20.14■□□□□ 0.81
CHRNA3-202ENST00000348639 ASTLQ6HA08 431 aaPredicted RBP20.14■□□□□ 0.81
CHRNA3-202ENST00000348639 PSRC1Q6PGN9 363 aaPredicted RBP20.14■□□□□ 0.81
CHRNA3-202ENST00000348639 SCRN2Q96FV2 425 aa20.14■□□□□ 0.81
CHRNA3-202ENST00000348639 HGH1Q9BTY7 390 aa20.14■□□□□ 0.81
CHRNA3-202ENST00000348639 NUSAP1Q9BXS6 441 aaKnown RBP20.14■□□□□ 0.81
CHRNA3-202ENST00000348639 CPEB1Q9BZB8 566 aaKnown RBP20.14■□□□□ 0.81
CHRNA3-202ENST00000348639 CEP44Q9C0F1 390 aa20.14■□□□□ 0.81
CHRNA3-202ENST00000348639 CACNA2D2Q9NY47 1150 aa20.14■□□□□ 0.81
CHRNA3-202ENST00000348639 NUDT4Q9NZJ9 180 aa20.14■□□□□ 0.81
CHRNA3-202ENST00000348639 SLC25A13Q9UJS0 675 aa20.14■□□□□ 0.81
CHRNA3-202ENST00000348639 PTGDR2Q9Y5Y4 395 aa20.14■□□□□ 0.81
CHRNA3-202ENST00000348639 NPIPB15A6NHN6 443 aaPredicted RBP20.13■□□□□ 0.81
CHRNA3-202ENST00000348639 FBP2O00757 339 aa20.13■□□□□ 0.81
CHRNA3-202ENST00000348639 CRCPO75575 148 aa20.13■□□□□ 0.81
CHRNA3-202ENST00000348639 SYN1P17600 705 aa20.13■□□□□ 0.81
CHRNA3-202ENST00000348639 GPX3P22352 226 aa20.13■□□□□ 0.81
CHRNA3-202ENST00000348639 IRS1P35568 1242 aa20.13■□□□□ 0.81
CHRNA3-202ENST00000348639 PKNOX1P55347 436 aa20.13■□□□□ 0.81
CHRNA3-202ENST00000348639 LRP8Q14114 963 aa20.13■□□□□ 0.81
CHRNA3-202ENST00000348639 CHRNA6Q15825 494 aa20.13■□□□□ 0.81
CHRNA3-202ENST00000348639 ARHGAP15Q53QZ3 475 aa20.13■□□□□ 0.81
CHRNA3-202ENST00000348639 ZNF697Q5TEC3 545 aa20.13■□□□□ 0.81
CHRNA3-202ENST00000348639 TRIM68Q6AZZ1 485 aa20.13■□□□□ 0.81
CHRNA3-202ENST00000348639 REP15Q6BDI9 236 aa20.13■□□□□ 0.81
CHRNA3-202ENST00000348639 TPRG1Q6ZUI0 275 aa20.13■□□□□ 0.81
CHRNA3-202ENST00000348639 DHDDSQ86SQ9 333 aa20.13■□□□□ 0.81
CHRNA3-202ENST00000348639 ADAMTSL2Q86TH1 951 aa20.13■□□□□ 0.81
CHRNA3-202ENST00000348639 TSPAN33Q86UF1 283 aa20.13■□□□□ 0.81
CHRNA3-202ENST00000348639 PCDH20Q8N6Y1 951 aaKnown RBP20.13■□□□□ 0.81
CHRNA3-202ENST00000348639 HIPK4Q8NE63 616 aa20.13■□□□□ 0.81
CHRNA3-202ENST00000348639 OR56A4Q8NGH8 313 aa20.13■□□□□ 0.81
CHRNA3-202ENST00000348639 SUV39H2Q9H5I1 410 aa20.13■□□□□ 0.81
CHRNA3-202ENST00000348639 TDP1Q9NUW8 608 aa20.13■□□□□ 0.81
CHRNA3-202ENST00000348639 SARDHQ9UL12 918 aa20.13■□□□□ 0.81
CHRNA3-202ENST00000348639 SCN8AQ9UQD0 1980 aa20.12■□□□□ 0.81
CHRNA3-202ENST00000348639 E2F3O00716 465 aa20.12■□□□□ 0.81
CHRNA3-202ENST00000348639 EPCAMP16422 314 aa20.12■□□□□ 0.81
CHRNA3-202ENST00000348639 UGT1A6P19224 532 aa20.12■□□□□ 0.81
CHRNA3-202ENST00000348639 UGT1A1P22309 533 aa20.12■□□□□ 0.81
CHRNA3-202ENST00000348639 UGT1A4P22310 534 aa20.12■□□□□ 0.81
CHRNA3-202ENST00000348639 ME2P23368 584 aa20.12■□□□□ 0.81
CHRNA3-202ENST00000348639 UGT1A3P35503 534 aa20.12■□□□□ 0.81
CHRNA3-202ENST00000348639 UGT1A5P35504 534 aa20.12■□□□□ 0.81
CHRNA3-202ENST00000348639 NTHL1P78549 312 aa20.12■□□□□ 0.81
CHRNA3-202ENST00000348639 CRTC1Q6UUV9 634 aa20.12■□□□□ 0.81
CHRNA3-202ENST00000348639 EFL1Q7Z2Z2 1120 aaKnown RBP20.12■□□□□ 0.81
CHRNA3-202ENST00000348639 SYVN1Q86TM6 617 aa20.12■□□□□ 0.81
CHRNA3-202ENST00000348639 ZNF184Q99676 751 aaPredicted RBP20.12■□□□□ 0.81
CHRNA3-202ENST00000348639 BBS2Q9BXC9 721 aa20.12■□□□□ 0.81
CHRNA3-202ENST00000348639 ZNF106Q9H2Y7 1883 aaKnown RBP20.12■□□□□ 0.81
CHRNA3-202ENST00000348639 BCAP29Q9UHQ4 241 aa20.12■□□□□ 0.81
CHRNA3-202ENST00000348639 CRLS1Q9UJA2 301 aa20.12■□□□□ 0.81
CHRNA3-202ENST00000348639 PCDHGA7Q9Y5G6 932 aa20.12■□□□□ 0.81
CHRNA3-202ENST00000348639 PRSS21Q9Y6M0 314 aa20.12■□□□□ 0.81
CHRNA3-202ENST00000348639 CDH23Q9H251 3354 aa20.12■□□□□ 0.81
CHRNA3-202ENST00000348639 MTCL1Q9Y4B5 1905 aaKnown RBP20.12■□□□□ 0.81
CHRNA3-202ENST00000348639 POP4O95707 220 aaKnown RBP20.12■□□□□ 0.81
CHRNA3-202ENST00000348639 LINC00032P0C843 101 aa20.12■□□□□ 0.81
CHRNA3-202ENST00000348639 UROSP10746 265 aa20.12■□□□□ 0.81
CHRNA3-202ENST00000348639 LBPP18428 481 aa20.12■□□□□ 0.81
CHRNA3-202ENST00000348639 XRCC1P18887 633 aaPredicted RBP20.12■□□□□ 0.81
CHRNA3-202ENST00000348639 PSMD8P48556 350 aa20.12■□□□□ 0.81
CHRNA3-202ENST00000348639 PSME3P61289 254 aa20.12■□□□□ 0.81
CHRNA3-202ENST00000348639 CARD16Q5EG05 197 aa20.12■□□□□ 0.81
CHRNA3-202ENST00000348639 PAOXQ6QHF9 649 aa20.12■□□□□ 0.81
CHRNA3-202ENST00000348639 MACC1Q6ZN28 852 aa20.12■□□□□ 0.81
CHRNA3-202ENST00000348639 RNF111Q6ZNA4 994 aa20.12■□□□□ 0.81
CHRNA3-202ENST00000348639 USP45Q70EL2 814 aa20.12■□□□□ 0.81
CHRNA3-202ENST00000348639 TUBGCP3Q96CW5 907 aa20.12■□□□□ 0.81
CHRNA3-202ENST00000348639 PLEKHG4BQ96PX9 1271 aa20.12■□□□□ 0.81
CHRNA3-202ENST00000348639 HTATIP2Q9BUP3 242 aa20.12■□□□□ 0.81
CHRNA3-202ENST00000348639 POLG2Q9UHN1 485 aa20.12■□□□□ 0.81
CHRNA3-202ENST00000348639 ZNF225Q9UK10 706 aa20.12■□□□□ 0.81
CHRNA3-202ENST00000348639 BTRCQ9Y297 605 aa20.12■□□□□ 0.81
CHRNA3-202ENST00000348639 SOBPA7XYQ1 873 aa20.11■□□□□ 0.81
CHRNA3-202ENST00000348639 AGAP14A8MT82 685 aa20.11■□□□□ 0.81
CHRNA3-202ENST00000348639 VGLL3A8MV65 326 aa20.11■□□□□ 0.81
CHRNA3-202ENST00000348639 NRP2O60462 931 aa20.11■□□□□ 0.81
CHRNA3-202ENST00000348639 PABPC1P11940 636 aaKnown RBP20.11■□□□□ 0.81
CHRNA3-202ENST00000348639 PRDX3P30048 256 aaKnown RBP20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms