RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 EFR3BQ9Y2G0 817 aa22.93■■□□□ 1.26
NPAS3-201ENST00000346562 CD247P20963 164 aa22.93■■□□□ 1.26
NPAS3-201ENST00000346562 MAPK12P53778 367 aa22.93■■□□□ 1.26
NPAS3-201ENST00000346562 MINDY4Q4G0A6 757 aa22.93■■□□□ 1.26
NPAS3-201ENST00000346562 FOXR2Q6PJQ5 311 aa22.93■■□□□ 1.26
NPAS3-201ENST00000346562 HCAR2Q8TDS4 363 aa22.93■■□□□ 1.26
NPAS3-201ENST00000346562 SLC38A3Q99624 504 aa22.93■■□□□ 1.26
NPAS3-201ENST00000346562 TCF25Q9BQ70 676 aa22.93■■□□□ 1.26
NPAS3-201ENST00000346562 SPATA31C1P0DKV0 1188 aa22.92■■□□□ 1.26
NPAS3-201ENST00000346562 AP1S1P61966 158 aa22.92■■□□□ 1.26
NPAS3-201ENST00000346562 SLC20A2Q08357 652 aa22.92■■□□□ 1.26
NPAS3-201ENST00000346562 FUT10Q6P4F1 479 aa22.92■■□□□ 1.26
NPAS3-201ENST00000346562 TBC1D10AQ9BXI6 508 aa22.92■■□□□ 1.26
NPAS3-201ENST00000346562 GOLGA2P5Q9HBQ8 144 aa22.92■■□□□ 1.26
NPAS3-201ENST00000346562 PDP1Q9P0J1 537 aaPredicted RBP22.92■■□□□ 1.26
NPAS3-201ENST00000346562 GNEQ9Y223 722 aaKnown RBP22.92■■□□□ 1.26
NPAS3-201ENST00000346562 A0A1B0GVM2 712 aa22.92■■□□□ 1.26
NPAS3-201ENST00000346562 TCAF2A6NFQ2 919 aa22.92■■□□□ 1.26
NPAS3-201ENST00000346562 MFSD11O43934 449 aa22.92■■□□□ 1.26
NPAS3-201ENST00000346562 PLIN3O60664 434 aa22.92■■□□□ 1.26
NPAS3-201ENST00000346562 RPS6KA3P51812 740 aa22.92■■□□□ 1.26
NPAS3-201ENST00000346562 RGS8P57771 180 aaPredicted RBP22.92■■□□□ 1.26
NPAS3-201ENST00000346562 NAE1Q13564 534 aa22.92■■□□□ 1.26
NPAS3-201ENST00000346562 LCN1P1Q5VSP4 162 aa22.92■■□□□ 1.26
NPAS3-201ENST00000346562 ZNF662Q6ZS27 426 aa22.92■■□□□ 1.26
NPAS3-201ENST00000346562 CMC1Q7Z7K0 106 aa22.92■■□□□ 1.26
NPAS3-201ENST00000346562 CFAP206Q8IYR0 622 aa22.92■■□□□ 1.26
NPAS3-201ENST00000346562 AZIN2Q96A70 460 aa22.92■■□□□ 1.26
NPAS3-201ENST00000346562 IL12RB2Q99665 862 aa22.92■■□□□ 1.26
NPAS3-201ENST00000346562 PRAMEF1O95521 474 aa22.92■■□□□ 1.26
NPAS3-201ENST00000346562 ANXA4P09525 319 aaPredicted RBP22.92■■□□□ 1.26
NPAS3-201ENST00000346562 PTDSS1P48651 473 aaKnown RBP22.92■■□□□ 1.26
NPAS3-201ENST00000346562 ATXN1P54253 815 aaKnown RBP22.92■■□□□ 1.26
NPAS3-201ENST00000346562 ATAD1Q8NBU5 361 aa22.92■■□□□ 1.26
NPAS3-201ENST00000346562 PCDHA2Q9Y5H9 948 aa22.92■■□□□ 1.26
NPAS3-201ENST00000346562 PLK4O00444 970 aa22.92■■□□□ 1.26
NPAS3-201ENST00000346562 DCLK1O15075 740 aa22.92■■□□□ 1.26
NPAS3-201ENST00000346562 MDM4O15151 490 aa22.92■■□□□ 1.26
NPAS3-201ENST00000346562 USP4Q13107 963 aa22.92■■□□□ 1.26
NPAS3-201ENST00000346562 CAPSLQ8WWF8 208 aa22.92■■□□□ 1.26
NPAS3-201ENST00000346562 MAGEH1Q9H213 219 aa22.92■■□□□ 1.26
NPAS3-201ENST00000346562 IQGAP1P46940 1657 aa22.92■■□□□ 1.26
NPAS3-201ENST00000346562 ZNF879B4DU55 563 aa22.92■■□□□ 1.26
NPAS3-201ENST00000346562 TP73O15350 636 aa22.92■■□□□ 1.26
NPAS3-201ENST00000346562 DGKZQ13574 1117 aa22.92■■□□□ 1.26
NPAS3-201ENST00000346562 OR5T3Q8NGG3 340 aa22.92■■□□□ 1.26
NPAS3-201ENST00000346562 CD99L2Q8TCZ2 262 aa22.92■■□□□ 1.26
NPAS3-201ENST00000346562 TWIST2Q8WVJ9 160 aa22.92■■□□□ 1.26
NPAS3-201ENST00000346562 CCDC28BQ9BUN5 200 aa22.92■■□□□ 1.26
NPAS3-201ENST00000346562 CHMP1AQ9HD42 196 aaPredicted RBP22.92■■□□□ 1.26
NPAS3-201ENST00000346562 HMGXB4Q9UGU5 601 aa22.92■■□□□ 1.26
NPAS3-201ENST00000346562 CORO1CQ9ULV4 474 aaPredicted RBP22.92■■□□□ 1.26
NPAS3-201ENST00000346562 PRKAB1Q9Y478 270 aa22.92■■□□□ 1.26
NPAS3-201ENST00000346562 MAP4K5Q9Y4K4 846 aa22.92■■□□□ 1.26
NPAS3-201ENST00000346562 SEPT4O43236 478 aa22.91■■□□□ 1.26
NPAS3-201ENST00000346562 C9P02748 559 aa22.91■■□□□ 1.26
NPAS3-201ENST00000346562 MTHFRP42898 656 aa22.91■■□□□ 1.26
NPAS3-201ENST00000346562 FUKQ8N0W3 1084 aa22.91■■□□□ 1.26
NPAS3-201ENST00000346562 PIGXQ8TBF5 258 aa22.91■■□□□ 1.26
NPAS3-201ENST00000346562 ZBTB48P10074 688 aaPredicted RBP22.91■■□□□ 1.26
NPAS3-201ENST00000346562 FOLH1Q04609 750 aa22.91■■□□□ 1.26
NPAS3-201ENST00000346562 GK5Q6ZS86 529 aa22.91■■□□□ 1.26
NPAS3-201ENST00000346562 YTHDF3Q7Z739 585 aaKnown RBP22.91■■□□□ 1.26
NPAS3-201ENST00000346562 MEIOBQ8N635 442 aa22.91■■□□□ 1.26
NPAS3-201ENST00000346562 ACBD6Q9BR61 282 aa22.91■■□□□ 1.26
NPAS3-201ENST00000346562 DNAJC28Q9NX36 388 aa22.91■■□□□ 1.26
NPAS3-201ENST00000346562 SDC2P34741 201 aa22.91■■□□□ 1.26
NPAS3-201ENST00000346562 RPL5P46777 297 aaKnown RBP22.91■■□□□ 1.26
NPAS3-201ENST00000346562 NDST2P52849 883 aa22.91■■□□□ 1.26
NPAS3-201ENST00000346562 PRR5P85299 388 aa22.91■■□□□ 1.26
NPAS3-201ENST00000346562 GTF2H2Q13888 395 aa22.91■■□□□ 1.26
NPAS3-201ENST00000346562 GTF2H2CQ6P1K8 395 aa22.91■■□□□ 1.26
NPAS3-201ENST00000346562 TRPV1Q8NER1 839 aa22.91■■□□□ 1.26
NPAS3-201ENST00000346562 SNX33Q8WV41 574 aa22.91■■□□□ 1.26
NPAS3-201ENST00000346562 SLC4A9Q96Q91 983 aa22.91■■□□□ 1.26
NPAS3-201ENST00000346562 GPR21Q99679 349 aa22.91■■□□□ 1.26
NPAS3-201ENST00000346562 OAS3Q9Y6K5 1087 aaKnown RBP22.91■■□□□ 1.26
NPAS3-201ENST00000346562 FADS2P1A8MWK0 482 aa22.91■■□□□ 1.26
NPAS3-201ENST00000346562 FFAR2O15552 330 aa22.91■■□□□ 1.26
NPAS3-201ENST00000346562 OR1F1O43749 312 aa22.91■■□□□ 1.26
NPAS3-201ENST00000346562 DUSP11O75319 330 aaKnown RBP22.91■■□□□ 1.26
NPAS3-201ENST00000346562 KRT36O76013 467 aa22.91■■□□□ 1.26
NPAS3-201ENST00000346562 GNA12Q03113 381 aa22.91■■□□□ 1.26
NPAS3-201ENST00000346562 RFWD3Q6PCD5 774 aa22.91■■□□□ 1.26
NPAS3-201ENST00000346562 SEZ6LQ9BYH1 1024 aa22.91■■□□□ 1.26
NPAS3-201ENST00000346562 NMUR1Q9HB89 426 aa22.91■■□□□ 1.26
NPAS3-201ENST00000346562 B3GALT2O43825 422 aa22.9■■□□□ 1.26
NPAS3-201ENST00000346562 GATBO75879 557 aaKnown RBP22.9■■□□□ 1.26
NPAS3-201ENST00000346562 PCSK2P16519 638 aa22.9■■□□□ 1.26
NPAS3-201ENST00000346562 RPIAP49247 311 aa22.9■■□□□ 1.26
NPAS3-201ENST00000346562 SCRN3Q0VDG4 424 aa22.9■■□□□ 1.26
NPAS3-201ENST00000346562 RBM18Q96H35 190 aaKnown RBP22.9■■□□□ 1.26
NPAS3-201ENST00000346562 DPEP2Q9H4A9 486 aa22.9■■□□□ 1.26
NPAS3-201ENST00000346562 PDZD7Q9H5P4 517 aa22.9■■□□□ 1.26
NPAS3-201ENST00000346562 TLX3O43711 291 aaPredicted RBP22.9■■□□□ 1.26
NPAS3-201ENST00000346562 CHP2O43745 196 aa22.9■■□□□ 1.26
NPAS3-201ENST00000346562 FADS2O95864 444 aaKnown RBP22.9■■□□□ 1.26
NPAS3-201ENST00000346562 CYB5AP00167 134 aa22.9■■□□□ 1.26
NPAS3-201ENST00000346562 DGKGP49619 791 aa22.9■■□□□ 1.26
NPAS3-201ENST00000346562 CASP9P55211 416 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms