RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 SKIDA1Q1XH10 827 aa15.55■□□□□ 0.08
TSPAN4-201ENST00000346501 PLA2G4EQ3MJ16 856 aa15.55■□□□□ 0.08
TSPAN4-201ENST00000346501 PHF19Q5T6S3 580 aa15.55■□□□□ 0.08
TSPAN4-201ENST00000346501 GPRC6AQ5T6X5 926 aa15.55■□□□□ 0.08
TSPAN4-201ENST00000346501 KCTD11Q693B1 232 aa15.55■□□□□ 0.08
TSPAN4-201ENST00000346501 DRICH1Q6PGQ1 229 aaPredicted RBP15.55■□□□□ 0.08
TSPAN4-201ENST00000346501 IYDQ6PHW0 289 aa15.55■□□□□ 0.08
TSPAN4-201ENST00000346501 ZNF438Q7Z4V0 828 aa15.55■□□□□ 0.08
TSPAN4-201ENST00000346501 AMZ2Q86W34 360 aa15.55■□□□□ 0.08
TSPAN4-201ENST00000346501 KLHDC8BQ8IXV7 354 aa15.55■□□□□ 0.08
TSPAN4-201ENST00000346501 SLC37A2Q8TED4 501 aa15.55■□□□□ 0.08
TSPAN4-201ENST00000346501 STYXQ8WUJ0 223 aa15.55■□□□□ 0.08
TSPAN4-201ENST00000346501 PATE1Q8WXA2 126 aa15.55■□□□□ 0.08
TSPAN4-201ENST00000346501 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.55■□□□□ 0.08
TSPAN4-201ENST00000346501 LIN37Q96GY3 246 aaPredicted RBP15.55■□□□□ 0.08
TSPAN4-201ENST00000346501 PBKQ96KB5 322 aa15.55■□□□□ 0.08
TSPAN4-201ENST00000346501 TTC1Q99614 292 aa15.55■□□□□ 0.08
TSPAN4-201ENST00000346501 CMKLR1Q99788 373 aa15.55■□□□□ 0.08
TSPAN4-201ENST00000346501 SARS2Q9NP81 518 aaKnown RBP15.55■□□□□ 0.08
TSPAN4-201ENST00000346501 RAB6BQ9NRW1 208 aa15.55■□□□□ 0.08
TSPAN4-201ENST00000346501 TBC1D29Q9UFV1 150 aa15.55■□□□□ 0.08
TSPAN4-201ENST00000346501 FKBPLQ9UIM3 349 aa15.55■□□□□ 0.08
TSPAN4-201ENST00000346501 SATB2Q9UPW6 733 aa15.55■□□□□ 0.08
TSPAN4-201ENST00000346501 DRG1Q9Y295 367 aaKnown RBP15.55■□□□□ 0.08
TSPAN4-201ENST00000346501 DNAJC16Q9Y2G8 782 aa15.55■□□□□ 0.08
TSPAN4-201ENST00000346501 PCDHGA8Q9Y5G5 932 aa15.55■□□□□ 0.08
TSPAN4-201ENST00000346501 EPG5Q9HCE0 2579 aa15.55■□□□□ 0.08
TSPAN4-201ENST00000346501 IGF2RP11717 2491 aa15.54■□□□□ 0.08
TSPAN4-201ENST00000346501 A0A1W2PQM1 296 aa15.54■□□□□ 0.08
TSPAN4-201ENST00000346501 DUX1O43812 170 aa15.54■□□□□ 0.08
TSPAN4-201ENST00000346501 VIPP01282 170 aa15.54■□□□□ 0.08
TSPAN4-201ENST00000346501 CXCR5P32302 372 aa15.54■□□□□ 0.08
TSPAN4-201ENST00000346501 OR1D5P58170 312 aa15.54■□□□□ 0.08
TSPAN4-201ENST00000346501 ERVPABLB-1P60509 514 aa15.54■□□□□ 0.08
TSPAN4-201ENST00000346501 TMPRSS15P98073 1019 aa15.54■□□□□ 0.08
TSPAN4-201ENST00000346501 NFATC2Q13469 925 aa15.54■□□□□ 0.08
TSPAN4-201ENST00000346501 OLIG2Q13516 323 aa15.54■□□□□ 0.08
TSPAN4-201ENST00000346501 POU6F1Q14863 301 aa15.54■□□□□ 0.08
TSPAN4-201ENST00000346501 NR1D2Q14995 579 aa15.54■□□□□ 0.08
TSPAN4-201ENST00000346501 TBC1D25Q3MII6 688 aa15.54■□□□□ 0.08
TSPAN4-201ENST00000346501 GPR33Q49SQ1 333 aa15.54■□□□□ 0.08
TSPAN4-201ENST00000346501 ZNF449Q6P9G9 518 aa15.54■□□□□ 0.08
TSPAN4-201ENST00000346501 RAB11FIP2Q7L804 512 aa15.54■□□□□ 0.08
TSPAN4-201ENST00000346501 SFTPA2Q8IWL1 248 aa15.54■□□□□ 0.08
TSPAN4-201ENST00000346501 FBXO39Q8N4B4 442 aa15.54■□□□□ 0.08
TSPAN4-201ENST00000346501 CCDC97Q96F63 343 aaPredicted RBP15.54■□□□□ 0.08
TSPAN4-201ENST00000346501 DCBLD2Q96PD2 775 aa15.54■□□□□ 0.08
TSPAN4-201ENST00000346501 EPB41L1Q9H4G0 881 aa15.54■□□□□ 0.08
TSPAN4-201ENST00000346501 VPS37BQ9H9H4 285 aa15.54■□□□□ 0.08
TSPAN4-201ENST00000346501 ETNK1Q9HBU6 452 aa15.54■□□□□ 0.08
TSPAN4-201ENST00000346501 RAXQ9Y2V3 346 aa15.54■□□□□ 0.08
TSPAN4-201ENST00000346501 CACNA1BQ00975 2339 aa15.54■□□□□ 0.08
TSPAN4-201ENST00000346501 ACACAQ13085 2346 aa15.54■□□□□ 0.08
TSPAN4-201ENST00000346501 HEATR9A2RTY3 570 aa15.53■□□□□ 0.08
TSPAN4-201ENST00000346501 F8W8V4 182 aa15.53■□□□□ 0.08
TSPAN4-201ENST00000346501 PLD2O14939 933 aa15.53■□□□□ 0.08
TSPAN4-201ENST00000346501 PPM1DO15297 605 aa15.53■□□□□ 0.08
TSPAN4-201ENST00000346501 DXOO77932 396 aaKnown RBP15.53■□□□□ 0.08
TSPAN4-201ENST00000346501 CAPNS1P04632 268 aa15.53■□□□□ 0.08
TSPAN4-201ENST00000346501 APRTP07741 180 aa15.53■□□□□ 0.08
TSPAN4-201ENST00000346501 TPH1P17752 444 aa15.53■□□□□ 0.08
TSPAN4-201ENST00000346501 PCBP4P57723 403 aaKnown RBP15.53■□□□□ 0.08
TSPAN4-201ENST00000346501 B4GALNT1Q00973 533 aa15.53■□□□□ 0.08
TSPAN4-201ENST00000346501 ZRANB3Q5FWF4 1079 aa15.53■□□□□ 0.08
TSPAN4-201ENST00000346501 DENND5AQ6IQ26 1287 aa15.53■□□□□ 0.08
TSPAN4-201ENST00000346501 TMEM220Q6QAJ8 160 aa15.53■□□□□ 0.08
TSPAN4-201ENST00000346501 USP53Q70EK8 1073 aa15.53■□□□□ 0.08
TSPAN4-201ENST00000346501 TAS2R42Q7RTR8 314 aa15.53■□□□□ 0.08
TSPAN4-201ENST00000346501 SNX20Q7Z614 316 aa15.53■□□□□ 0.08
TSPAN4-201ENST00000346501 RBM12BQ8IXT5 1001 aaKnown RBP15.53■□□□□ 0.08
TSPAN4-201ENST00000346501 BEND7Q8N7W2 519 aaPredicted RBP15.53■□□□□ 0.08
TSPAN4-201ENST00000346501 OR13C4Q8NGS5 318 aa15.53■□□□□ 0.08
TSPAN4-201ENST00000346501 CXorf40BQ96DE9 158 aa15.53■□□□□ 0.08
TSPAN4-201ENST00000346501 COPS8Q99627 209 aa15.53■□□□□ 0.08
TSPAN4-201ENST00000346501 FOXP3Q9BZS1 431 aa15.53■□□□□ 0.08
TSPAN4-201ENST00000346501 PRDM8Q9NQV8 689 aa15.53■□□□□ 0.08
TSPAN4-201ENST00000346501 CPNE7Q9UBL6 633 aa15.53■□□□□ 0.08
TSPAN4-201ENST00000346501 ATXN7L1Q9ULK2 861 aaPredicted RBP15.53■□□□□ 0.08
TSPAN4-201ENST00000346501 ST14Q9Y5Y6 855 aa15.53■□□□□ 0.08
TSPAN4-201ENST00000346501 UNC13CQ8NB66 2214 aa15.52■□□□□ 0.08
TSPAN4-201ENST00000346501 GOLGA6L10A0A0M3HER8 536 aa15.52■□□□□ 0.08
TSPAN4-201ENST00000346501 OR2AG2A6NM03 316 aa15.52■□□□□ 0.08
TSPAN4-201ENST00000346501 B4GAT1O43505 415 aa15.52■□□□□ 0.08
TSPAN4-201ENST00000346501 LDB2O43679 373 aa15.52■□□□□ 0.08
TSPAN4-201ENST00000346501 POP7O75817 140 aaKnown RBP15.52■□□□□ 0.08
TSPAN4-201ENST00000346501 TNFSF15O95150 251 aa15.52■□□□□ 0.08
TSPAN4-201ENST00000346501 MC4RP32245 332 aa15.52■□□□□ 0.08
TSPAN4-201ENST00000346501 PPARGP37231 505 aaPredicted RBP15.52■□□□□ 0.08
TSPAN4-201ENST00000346501 ZNF140P52738 457 aaPredicted RBP15.52■□□□□ 0.08
TSPAN4-201ENST00000346501 EPHA4P54764 986 aa15.52■□□□□ 0.08
TSPAN4-201ENST00000346501 BASP1P80723 227 aaKnown RBP15.52■□□□□ 0.08
TSPAN4-201ENST00000346501 SARNPP82979 210 aaKnown RBP15.52■□□□□ 0.08
TSPAN4-201ENST00000346501 SEMA5AQ13591 1074 aa15.52■□□□□ 0.08
TSPAN4-201ENST00000346501 TRA2AQ13595 282 aaKnown RBP eCLIP15.52■□□□□ 0.08
TSPAN4-201ENST00000346501 PTPRCAPQ14761 206 aa15.52■□□□□ 0.08
TSPAN4-201ENST00000346501 SEPT7Q16181 437 aaKnown RBP15.52■□□□□ 0.08
TSPAN4-201ENST00000346501 FNBP1LQ5T0N5 605 aa15.52■□□□□ 0.08
TSPAN4-201ENST00000346501 TMEM164Q5U3C3 297 aa15.52■□□□□ 0.08
TSPAN4-201ENST00000346501 IGF2-ASQ6U949 168 aa15.52■□□□□ 0.08
TSPAN4-201ENST00000346501 WASH2PQ6VEQ5 465 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms