RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 AHCYL1O43865 530 aa15.28■□□□□ 0.04
UPF3B-202ENST00000345865 TIPRLO75663 272 aa15.28■□□□□ 0.04
UPF3B-202ENST00000345865 ESR1P03372 595 aa15.28■□□□□ 0.04
UPF3B-202ENST00000345865 SOD2P04179 222 aa15.28■□□□□ 0.04
UPF3B-202ENST00000345865 UROSP10746 265 aa15.28■□□□□ 0.04
UPF3B-202ENST00000345865 GKP32189 559 aa15.28■□□□□ 0.04
UPF3B-202ENST00000345865 HMGCLP35914 325 aa15.28■□□□□ 0.04
UPF3B-202ENST00000345865 POLE2P56282 527 aa15.28■□□□□ 0.04
UPF3B-202ENST00000345865 ERVPABLB-1P60509 514 aa15.28■□□□□ 0.04
UPF3B-202ENST00000345865 UFM1P61960 85 aa15.28■□□□□ 0.04
UPF3B-202ENST00000345865 IKBKEQ14164 716 aa15.28■□□□□ 0.04
UPF3B-202ENST00000345865 RPS6KA2Q15349 733 aa15.28■□□□□ 0.04
UPF3B-202ENST00000345865 PAGE3Q5JUK9 113 aa15.28■□□□□ 0.04
UPF3B-202ENST00000345865 TXNDC8Q6A555 127 aa15.28■□□□□ 0.04
UPF3B-202ENST00000345865 TXNDC11Q6PKC3 985 aa15.28■□□□□ 0.04
UPF3B-202ENST00000345865 APCDD1Q8J025 514 aa15.28■□□□□ 0.04
UPF3B-202ENST00000345865 ARL14EPQ8N8R7 260 aaPredicted RBP15.28■□□□□ 0.04
UPF3B-202ENST00000345865 VWCEQ96DN2 955 aa15.28■□□□□ 0.04
UPF3B-202ENST00000345865 C1orf50Q9BV19 199 aa15.28■□□□□ 0.04
UPF3B-202ENST00000345865 BOCQ9BWV1 1114 aa15.28■□□□□ 0.04
UPF3B-202ENST00000345865 Q9H521 79 aa15.28■□□□□ 0.04
UPF3B-202ENST00000345865 SLAMF8Q9P0V8 285 aa15.28■□□□□ 0.04
UPF3B-202ENST00000345865 OR6B1O95007 311 aa15.27■□□□□ 0.04
UPF3B-202ENST00000345865 MLYCDO95822 493 aa15.27■□□□□ 0.04
UPF3B-202ENST00000345865 TFAP2AP05549 437 aa15.27■□□□□ 0.04
UPF3B-202ENST00000345865 PABPC4LP0CB38 370 aaKnown RBP15.27■□□□□ 0.04
UPF3B-202ENST00000345865 IL12AP29459 219 aa15.27■□□□□ 0.04
UPF3B-202ENST00000345865 DEFB115Q30KQ5 88 aa15.27■□□□□ 0.04
UPF3B-202ENST00000345865 LETMD1Q6P1Q0 360 aa15.27■□□□□ 0.04
UPF3B-202ENST00000345865 ZNF783Q6ZMS7 281 aa15.27■□□□□ 0.04
UPF3B-202ENST00000345865 Q6ZSR9 355 aa15.27■□□□□ 0.04
UPF3B-202ENST00000345865 CDYL2Q8N8U2 506 aa15.27■□□□□ 0.04
UPF3B-202ENST00000345865 OR2T34Q8NGX1 318 aa15.27■□□□□ 0.04
UPF3B-202ENST00000345865 OR2T3Q8NH03 318 aa15.27■□□□□ 0.04
UPF3B-202ENST00000345865 RIN3Q8TB24 985 aa15.27■□□□□ 0.04
UPF3B-202ENST00000345865 PIP4K2CQ8TBX8 421 aa15.27■□□□□ 0.04
UPF3B-202ENST00000345865 CIB1Q99828 191 aa15.27■□□□□ 0.04
UPF3B-202ENST00000345865 GPR63Q9BZJ6 419 aa15.27■□□□□ 0.04
UPF3B-202ENST00000345865 HSFX1Q9UBD0 423 aa15.27■□□□□ 0.04
UPF3B-202ENST00000345865 CLEC4EQ9ULY5 219 aa15.27■□□□□ 0.04
UPF3B-202ENST00000345865 LZTS1Q9Y250 596 aa15.27■□□□□ 0.04
UPF3B-202ENST00000345865 PCDHA9Q9Y5H5 950 aa15.27■□□□□ 0.04
UPF3B-202ENST00000345865 ST14Q9Y5Y6 855 aa15.27■□□□□ 0.04
UPF3B-202ENST00000345865 OBSL1O75147 1896 aa15.27■□□□□ 0.04
UPF3B-202ENST00000345865 A0A1B0GTW7 788 aa15.27■□□□□ 0.03
UPF3B-202ENST00000345865 SNX2O60749 519 aa15.27■□□□□ 0.03
UPF3B-202ENST00000345865 VPS4BO75351 444 aa15.27■□□□□ 0.03
UPF3B-202ENST00000345865 CKMT2P17540 419 aa15.27■□□□□ 0.03
UPF3B-202ENST00000345865 CACNG1Q06432 222 aa15.27■□□□□ 0.03
UPF3B-202ENST00000345865 RCAN2Q14206 197 aa15.27■□□□□ 0.03
UPF3B-202ENST00000345865 TPGS2Q68CL5 300 aa15.27■□□□□ 0.03
UPF3B-202ENST00000345865 IYDQ6PHW0 289 aa15.27■□□□□ 0.03
UPF3B-202ENST00000345865 SBSNQ6UWP8 590 aa15.27■□□□□ 0.03
UPF3B-202ENST00000345865 FAM151BQ6UXP7 276 aa15.27■□□□□ 0.03
UPF3B-202ENST00000345865 GPRIN3Q6ZVF9 776 aa15.27■□□□□ 0.03
UPF3B-202ENST00000345865 SPPL2CQ8IUH8 684 aa15.27■□□□□ 0.03
UPF3B-202ENST00000345865 OR56A4Q8NGH8 313 aa15.27■□□□□ 0.03
UPF3B-202ENST00000345865 LKAAEAR1Q8TD35 194 aa15.27■□□□□ 0.03
UPF3B-202ENST00000345865 RPL10LQ96L21 214 aaKnown RBP15.27■□□□□ 0.03
UPF3B-202ENST00000345865 ZNF597Q96LX8 424 aa15.27■□□□□ 0.03
UPF3B-202ENST00000345865 HBEGFQ99075 208 aa15.27■□□□□ 0.03
UPF3B-202ENST00000345865 CENPKQ9BS16 269 aa15.27■□□□□ 0.03
UPF3B-202ENST00000345865 NUSAP1Q9BXS6 441 aaKnown RBP15.27■□□□□ 0.03
UPF3B-202ENST00000345865 HACD3Q9P035 362 aa15.27■□□□□ 0.03
UPF3B-202ENST00000345865 DHRS7Q9Y394 339 aa15.27■□□□□ 0.03
UPF3B-202ENST00000345865 PKP3Q9Y446 797 aa15.27■□□□□ 0.03
UPF3B-202ENST00000345865 ZFC3H1O60293 1989 aaKnown RBP15.26■□□□□ 0.03
UPF3B-202ENST00000345865 A0A1W2PP18 115 aa15.26■□□□□ 0.03
UPF3B-202ENST00000345865 PGLSO95336 258 aa15.26■□□□□ 0.03
UPF3B-202ENST00000345865 HSD17B1P14061 328 aa15.26■□□□□ 0.03
UPF3B-202ENST00000345865 HTR6P50406 440 aa15.26■□□□□ 0.03
UPF3B-202ENST00000345865 MAP7D1Q3KQU3 841 aa15.26■□□□□ 0.03
UPF3B-202ENST00000345865 PABPC1LQ4VXU2 614 aaKnown RBP15.26■□□□□ 0.03
UPF3B-202ENST00000345865 RABL3Q5HYI8 236 aa15.26■□□□□ 0.03
UPF3B-202ENST00000345865 Q6ZNB5 142 aa15.26■□□□□ 0.03
UPF3B-202ENST00000345865 SPATA19Q7Z5L4 167 aa15.26■□□□□ 0.03
UPF3B-202ENST00000345865 DNAJB14Q8TBM8 379 aa15.26■□□□□ 0.03
UPF3B-202ENST00000345865 NUDT8Q8WV74 236 aa15.26■□□□□ 0.03
UPF3B-202ENST00000345865 PBXIP1Q96AQ6 731 aa15.26■□□□□ 0.03
UPF3B-202ENST00000345865 BRINP2Q9C0B6 783 aa15.26■□□□□ 0.03
UPF3B-202ENST00000345865 MAGEE1Q9HCI5 957 aa15.26■□□□□ 0.03
UPF3B-202ENST00000345865 EVLQ9UI08 416 aaPredicted RBP15.26■□□□□ 0.03
UPF3B-202ENST00000345865 RNF11Q9Y3C5 154 aa15.26■□□□□ 0.03
UPF3B-202ENST00000345865 PRSS21Q9Y6M0 314 aa15.26■□□□□ 0.03
UPF3B-202ENST00000345865 PIKFYVEQ9Y2I7 2098 aa15.26■□□□□ 0.03
UPF3B-202ENST00000345865 PRRG1O14668 218 aa15.26■□□□□ 0.03
UPF3B-202ENST00000345865 PRMT5O14744 637 aaPredicted RBP15.26■□□□□ 0.03
UPF3B-202ENST00000345865 KIF3CO14782 793 aa15.26■□□□□ 0.03
UPF3B-202ENST00000345865 PFDN6O15212 129 aa15.26■□□□□ 0.03
UPF3B-202ENST00000345865 BAIAP3O94812 1187 aa15.26■□□□□ 0.03
UPF3B-202ENST00000345865 SPATA31D3P0C874 917 aa15.26■□□□□ 0.03
UPF3B-202ENST00000345865 ITGB6P18564 788 aa15.26■□□□□ 0.03
UPF3B-202ENST00000345865 UGT1A6P19224 532 aa15.26■□□□□ 0.03
UPF3B-202ENST00000345865 GSTT1P30711 240 aa15.26■□□□□ 0.03
UPF3B-202ENST00000345865 AARS2Q5JTZ9 985 aaKnown RBP15.26■□□□□ 0.03
UPF3B-202ENST00000345865 C6orf136Q5SQH8 315 aa15.26■□□□□ 0.03
UPF3B-202ENST00000345865 SLC30A9Q6PML9 568 aa15.26■□□□□ 0.03
UPF3B-202ENST00000345865 SPATA31D4Q6ZUB0 917 aa15.26■□□□□ 0.03
UPF3B-202ENST00000345865 GALNT15Q8N3T1 639 aa15.26■□□□□ 0.03
UPF3B-202ENST00000345865 CLDN19Q8N6F1 224 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms