RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 CNDP2Q96KP4 475 aaKnown RBP19.22■□□□□ 0.67
HDAC4-201ENST00000345617 TRIM64CA6NLI5 447 aa19.22■□□□□ 0.67
HDAC4-201ENST00000345617 GRIA1P42261 906 aa19.22■□□□□ 0.67
HDAC4-201ENST00000345617 HSPA14Q0VDF9 509 aa19.22■□□□□ 0.67
HDAC4-201ENST00000345617 ZNF350Q9GZX5 532 aa19.22■□□□□ 0.67
HDAC4-201ENST00000345617 PGM5Q15124 567 aa19.22■□□□□ 0.67
HDAC4-201ENST00000345617 TMEM161BQ8NDZ6 487 aa19.22■□□□□ 0.67
HDAC4-201ENST00000345617 FKBP7Q9Y680 259 aa19.22■□□□□ 0.67
HDAC4-201ENST00000345617 ARID1AO14497 2285 aa19.22■□□□□ 0.67
HDAC4-201ENST00000345617 NFASCO94856 1347 aa19.22■□□□□ 0.67
HDAC4-201ENST00000345617 CYP3A7-CYP3A51PA0A087WV96 503 aa19.22■□□□□ 0.67
HDAC4-201ENST00000345617 UPP2O95045 317 aa19.22■□□□□ 0.67
HDAC4-201ENST00000345617 CCNB2O95067 398 aa19.22■□□□□ 0.67
HDAC4-201ENST00000345617 RAP2AP10114 183 aa19.22■□□□□ 0.67
HDAC4-201ENST00000345617 ZNF3P17036 446 aa19.22■□□□□ 0.67
HDAC4-201ENST00000345617 MSR1P21757 451 aa19.22■□□□□ 0.67
HDAC4-201ENST00000345617 CYP3A7P24462 503 aa19.22■□□□□ 0.67
HDAC4-201ENST00000345617 SLC7A1P30825 629 aa19.22■□□□□ 0.67
HDAC4-201ENST00000345617 F8VP50 259 aa19.22■□□□□ 0.67
HDAC4-201ENST00000345617 DHX15O43143 795 aaKnown RBP19.22■□□□□ 0.67
HDAC4-201ENST00000345617 PEX2P28328 305 aa19.22■□□□□ 0.67
HDAC4-201ENST00000345617 LINGO1Q96FE5 620 aa19.22■□□□□ 0.67
HDAC4-201ENST00000345617 NUDT4Q9NZJ9 180 aa19.22■□□□□ 0.67
HDAC4-201ENST00000345617 HNRNPLP14866 589 aaKnown RBP eCLIP19.22■□□□□ 0.674e-8■■■■■ 27.1
HDAC4-201ENST00000345617 ATP5C1P36542 298 aaKnown RBP19.22■□□□□ 0.67
HDAC4-201ENST00000345617 AKAP12Q02952 1782 aa19.22■□□□□ 0.67
HDAC4-201ENST00000345617 TACSTD2P09758 323 aa19.22■□□□□ 0.67
HDAC4-201ENST00000345617 DNASE1L1P49184 302 aa19.22■□□□□ 0.67
HDAC4-201ENST00000345617 MARSP56192 900 aaKnown RBP19.22■□□□□ 0.67
HDAC4-201ENST00000345617 TIGD6Q17RP2 521 aa19.22■□□□□ 0.67
HDAC4-201ENST00000345617 OR2L3Q8NG85 312 aa19.22■□□□□ 0.67
HDAC4-201ENST00000345617 THAP6Q8TBB0 222 aa19.22■□□□□ 0.67
HDAC4-201ENST00000345617 FER1L4A9Z1Z3 1794 aa19.21■□□□□ 0.67
HDAC4-201ENST00000345617 PNLDC1Q8NA58 520 aaKnown RBP19.21■□□□□ 0.67
HDAC4-201ENST00000345617 OR2B2Q9GZK3 357 aa19.21■□□□□ 0.67
HDAC4-201ENST00000345617 LRRC4CQ9HCJ2 640 aa19.21■□□□□ 0.67
HDAC4-201ENST00000345617 KERAO60938 352 aa19.21■□□□□ 0.67
HDAC4-201ENST00000345617 C4orf46Q504U0 113 aa19.21■□□□□ 0.67
HDAC4-201ENST00000345617 GLYATQ6IB77 296 aa19.21■□□□□ 0.67
HDAC4-201ENST00000345617 MAB21L2Q9Y586 359 aa19.21■□□□□ 0.67
HDAC4-201ENST00000345617 C8BP07358 591 aa19.21■□□□□ 0.67
HDAC4-201ENST00000345617 CSTF1Q05048 431 aaKnown RBP19.21■□□□□ 0.67
HDAC4-201ENST00000345617 FAM91A1Q658Y4 838 aa19.21■□□□□ 0.67
HDAC4-201ENST00000345617 DCDC2CA8MYV0 355 aa19.21■□□□□ 0.67
HDAC4-201ENST00000345617 CLDN9O95484 217 aa19.21■□□□□ 0.67
HDAC4-201ENST00000345617 HTR1BP28222 390 aa19.21■□□□□ 0.67
HDAC4-201ENST00000345617 CLCN3P51790 818 aa19.21■□□□□ 0.67
HDAC4-201ENST00000345617 TOMM20Q15388 145 aa19.21■□□□□ 0.67
HDAC4-201ENST00000345617 TMEM27Q9HBJ8 222 aa19.21■□□□□ 0.67
HDAC4-201ENST00000345617 VWA7Q9Y334 891 aa19.21■□□□□ 0.67
HDAC4-201ENST00000345617 CD247P20963 164 aa19.21■□□□□ 0.67
HDAC4-201ENST00000345617 ATP13A4Q4VNC1 1196 aa19.21■□□□□ 0.67
HDAC4-201ENST00000345617 PRAMEF17Q5VTA0 474 aa19.21■□□□□ 0.67
HDAC4-201ENST00000345617 C12orf43Q96C57 262 aaKnown RBP19.21■□□□□ 0.67
HDAC4-201ENST00000345617 MIA3Q5JRA6 1907 aa19.21■□□□□ 0.67
HDAC4-201ENST00000345617 SLC26A9Q7LBE3 791 aa19.21■□□□□ 0.67
HDAC4-201ENST00000345617 IGSF9Q9P2J2 1179 aa19.21■□□□□ 0.67
HDAC4-201ENST00000345617 LINGO3P0C6S8 592 aa19.21■□□□□ 0.67
HDAC4-201ENST00000345617 MATKP42679 507 aa19.21■□□□□ 0.67
HDAC4-201ENST00000345617 AP2S1P53680 142 aaPredicted RBP19.21■□□□□ 0.67
HDAC4-201ENST00000345617 CAPN13Q6MZZ7 669 aaPredicted RBP19.21■□□□□ 0.67
HDAC4-201ENST00000345617 GALNT5Q7Z7M9 940 aa19.21■□□□□ 0.67
HDAC4-201ENST00000345617 CCSER2Q9H7U1 834 aa19.21■□□□□ 0.67
HDAC4-201ENST00000345617 ADGRD1Q6QNK2 874 aa19.2■□□□□ 0.66
HDAC4-201ENST00000345617 ASB9Q96DX5 294 aa19.2■□□□□ 0.66
HDAC4-201ENST00000345617 ISPDA4D126 451 aa19.2■□□□□ 0.66
HDAC4-201ENST00000345617 FCGRTP55899 365 aa19.2■□□□□ 0.66
HDAC4-201ENST00000345617 DCDC1P59894 354 aa19.2■□□□□ 0.66
HDAC4-201ENST00000345617 CDKL4Q5MAI5 379 aa19.2■□□□□ 0.66
HDAC4-201ENST00000345617 ATG13O75143 517 aa19.2■□□□□ 0.66
HDAC4-201ENST00000345617 IFI30P13284 250 aa19.2■□□□□ 0.66
HDAC4-201ENST00000345617 NATD1Q8N6N6 113 aa19.2■□□□□ 0.66
HDAC4-201ENST00000345617 ARRDC4Q8NCT1 418 aa19.2■□□□□ 0.66
HDAC4-201ENST00000345617 TCF25Q9BQ70 676 aa19.2■□□□□ 0.66
HDAC4-201ENST00000345617 CUEDC1Q9NWM3 386 aaPredicted RBP19.2■□□□□ 0.66
HDAC4-201ENST00000345617 PRR36Q9H6K5 1346 aa19.2■□□□□ 0.66
HDAC4-201ENST00000345617 MAPK3P27361 379 aaPredicted RBP19.2■□□□□ 0.66
HDAC4-201ENST00000345617 KLHDC10Q6PID8 442 aa19.2■□□□□ 0.66
HDAC4-201ENST00000345617 SLC38A4Q969I6 547 aa19.2■□□□□ 0.66
HDAC4-201ENST00000345617 ALDH2P05091 517 aa19.2■□□□□ 0.66
HDAC4-201ENST00000345617 SLC18A1P54219 525 aa19.2■□□□□ 0.66
HDAC4-201ENST00000345617 PRKAG1P54619 331 aa19.2■□□□□ 0.66
HDAC4-201ENST00000345617 GALNTL5Q7Z4T8 443 aa19.2■□□□□ 0.66
HDAC4-201ENST00000345617 RIOX2Q8IUF8 465 aa19.2■□□□□ 0.66
HDAC4-201ENST00000345617 ZNF563Q8TA94 476 aa19.2■□□□□ 0.66
HDAC4-201ENST00000345617 C8orf48Q96LL4 319 aa19.2■□□□□ 0.66
HDAC4-201ENST00000345617 ZNF471Q9BX82 626 aaPredicted RBP19.2■□□□□ 0.66
HDAC4-201ENST00000345617 C5orf60A6NFR6 353 aa19.2■□□□□ 0.66
HDAC4-201ENST00000345617 EML1O00423 815 aa19.2■□□□□ 0.66
HDAC4-201ENST00000345617 LPCAT4Q643R3 524 aa19.2■□□□□ 0.66
HDAC4-201ENST00000345617 SERPINA13PQ6UXR4 307 aa19.2■□□□□ 0.66
HDAC4-201ENST00000345617 GPR156Q8NFN8 814 aa19.2■□□□□ 0.66
HDAC4-201ENST00000345617 UNKLQ9H9P5 680 aaKnown RBP19.2■□□□□ 0.66
HDAC4-201ENST00000345617 TMEM5Q9Y2B1 443 aa19.2■□□□□ 0.66
HDAC4-201ENST00000345617 SDK1Q7Z5N4 2213 aa19.2■□□□□ 0.66
HDAC4-201ENST00000345617 ENDOD1O94919 500 aa19.2■□□□□ 0.66
HDAC4-201ENST00000345617 GNAZP19086 355 aa19.2■□□□□ 0.66
HDAC4-201ENST00000345617 CYP4F8P98187 520 aa19.2■□□□□ 0.66
HDAC4-201ENST00000345617 PON3Q15166 354 aa19.2■□□□□ 0.66
HDAC4-201ENST00000345617 HJURPQ8NCD3 748 aaPredicted RBP19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms