RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 PCDHGA7Q9Y5G6 932 aa14.24□□□□□ -0.13
HMGN3-202ENST00000344726 ARL5AQ9Y689 179 aa14.24□□□□□ -0.13
HMGN3-202ENST00000344726 SDK2Q58EX2 2172 aa14.24□□□□□ -0.13
HMGN3-202ENST00000344726 BAHCC1Q9P281 2608 aa14.24□□□□□ -0.13
HMGN3-202ENST00000344726 FASNP49327 2511 aaKnown RBP14.23□□□□□ -0.13
HMGN3-202ENST00000344726 KALRNO60229 2985 aa14.23□□□□□ -0.13
HMGN3-202ENST00000344726 IGHV1OR21-1A0A087WYE8 117 aa14.23□□□□□ -0.13
HMGN3-202ENST00000344726 PRAMEF33A0A0G2JMD5 474 aa14.23□□□□□ -0.13
HMGN3-202ENST00000344726 IGHV5-10-1A0A0J9YXX1 117 aa14.23□□□□□ -0.13
HMGN3-202ENST00000344726 C5orf60A6NFR6 353 aa14.23□□□□□ -0.13
HMGN3-202ENST00000344726 PRR19A6NJB7 356 aa14.23□□□□□ -0.13
HMGN3-202ENST00000344726 GOLGA6L6A8MZA4 724 aa14.23□□□□□ -0.13
HMGN3-202ENST00000344726 GPR89AB7ZAQ6 455 aa14.23□□□□□ -0.13
HMGN3-202ENST00000344726 C9orf172C9J069 976 aa14.23□□□□□ -0.13
HMGN3-202ENST00000344726 TMX2-CTNND1H3BSU7 103 aa14.23□□□□□ -0.13
HMGN3-202ENST00000344726 EFSO43281 561 aa14.23□□□□□ -0.13
HMGN3-202ENST00000344726 SNX2O60749 519 aa14.23□□□□□ -0.13
HMGN3-202ENST00000344726 PRAMEF10O60809 474 aa14.23□□□□□ -0.13
HMGN3-202ENST00000344726 CPNE6O95741 557 aa14.23□□□□□ -0.13
HMGN3-202ENST00000344726 GPR89BP0CG08 455 aa14.23□□□□□ -0.13
HMGN3-202ENST00000344726 CCL4P13236 92 aa14.23□□□□□ -0.13
HMGN3-202ENST00000344726 MPSTP25325 297 aa14.23□□□□□ -0.13
HMGN3-202ENST00000344726 SPAM1P38567 509 aa14.23□□□□□ -0.13
HMGN3-202ENST00000344726 TNNT3P45378 269 aaPredicted RBP14.23□□□□□ -0.13
HMGN3-202ENST00000344726 GPR3P46089 330 aa14.23□□□□□ -0.13
HMGN3-202ENST00000344726 ARSDP51689 593 aa14.23□□□□□ -0.13
HMGN3-202ENST00000344726 TMPRSS3P57727 454 aa14.23□□□□□ -0.13
HMGN3-202ENST00000344726 SPARCL1Q14515 664 aa14.23□□□□□ -0.13
HMGN3-202ENST00000344726 TGIF1Q15583 401 aa14.23□□□□□ -0.13
HMGN3-202ENST00000344726 PHF19Q5T6S3 580 aa14.23□□□□□ -0.13
HMGN3-202ENST00000344726 DENND5AQ6IQ26 1287 aa14.23□□□□□ -0.13
HMGN3-202ENST00000344726 IYDQ6PHW0 289 aa14.23□□□□□ -0.13
HMGN3-202ENST00000344726 FAM151BQ6UXP7 276 aa14.23□□□□□ -0.13
HMGN3-202ENST00000344726 C11orf96Q7Z7L8 435 aa14.23□□□□□ -0.13
HMGN3-202ENST00000344726 FAM71DQ8N9W8 422 aa14.23□□□□□ -0.13
HMGN3-202ENST00000344726 SLC35B2Q8TB61 432 aa14.23□□□□□ -0.13
HMGN3-202ENST00000344726 DTX3LQ8TDB6 740 aa14.23□□□□□ -0.13
HMGN3-202ENST00000344726 CCDC74BQ96LY2 380 aa14.23□□□□□ -0.13
HMGN3-202ENST00000344726 FERMT1Q9BQL6 677 aa14.23□□□□□ -0.13
HMGN3-202ENST00000344726 SCHIP1Q9P0W5 487 aaPredicted RBP14.23□□□□□ -0.13
HMGN3-202ENST00000344726 CFAP46Q8IYW2 2715 aa14.22□□□□□ -0.13
HMGN3-202ENST00000344726 TEX51A0A1B0GUA7 166 aa14.22□□□□□ -0.13
HMGN3-202ENST00000344726 GOLGA6L9A6NEM1 432 aa14.22□□□□□ -0.13
HMGN3-202ENST00000344726 ATXN7O15265 892 aaPredicted RBP14.22□□□□□ -0.13
HMGN3-202ENST00000344726 ARHGAP6O43182 974 aa14.22□□□□□ -0.13
HMGN3-202ENST00000344726 VEGFDO43915 354 aa14.22□□□□□ -0.13
HMGN3-202ENST00000344726 STK10O94804 968 aaKnown RBP14.22□□□□□ -0.13
HMGN3-202ENST00000344726 CDK14O94921 469 aa14.22□□□□□ -0.13
HMGN3-202ENST00000344726 METTL18O95568 372 aa14.22□□□□□ -0.13
HMGN3-202ENST00000344726 F3P13726 295 aa14.22□□□□□ -0.13
HMGN3-202ENST00000344726 ZNF7P17097 686 aaPredicted RBP14.22□□□□□ -0.13
HMGN3-202ENST00000344726 CLCNKAP51800 687 aa14.22□□□□□ -0.13
HMGN3-202ENST00000344726 TMEM115Q12893 351 aaPredicted RBP14.22□□□□□ -0.13
HMGN3-202ENST00000344726 BIRC2Q13490 618 aa14.22□□□□□ -0.13
HMGN3-202ENST00000344726 KCTD11Q693B1 232 aa14.22□□□□□ -0.13
HMGN3-202ENST00000344726 MICALCLQ6ZW33 695 aa14.22□□□□□ -0.13
HMGN3-202ENST00000344726 PIM3Q86V86 326 aa14.22□□□□□ -0.13
HMGN3-202ENST00000344726 LRRTM4Q86VH4 590 aa14.22□□□□□ -0.13
HMGN3-202ENST00000344726 JAMLQ86YT9 394 aa14.22□□□□□ -0.13
HMGN3-202ENST00000344726 TTC13Q8NBP0 860 aa14.22□□□□□ -0.13
HMGN3-202ENST00000344726 SNRNP27Q8WVK2 155 aaKnown RBP14.22□□□□□ -0.13
HMGN3-202ENST00000344726 ATG4AQ8WYN0 398 aa14.22□□□□□ -0.13
HMGN3-202ENST00000344726 TBL1YQ9BQ87 522 aa14.22□□□□□ -0.13
HMGN3-202ENST00000344726 TMEM121Q9BTD3 319 aa14.22□□□□□ -0.13
HMGN3-202ENST00000344726 TSGA10Q9BZW7 698 aa14.22□□□□□ -0.13
HMGN3-202ENST00000344726 KCNK4Q9NYG8 393 aa14.22□□□□□ -0.13
HMGN3-202ENST00000344726 ACSL6Q9UKU0 697 aa14.22□□□□□ -0.13
HMGN3-202ENST00000344726 AAR2Q9Y312 384 aaKnown RBP14.22□□□□□ -0.13
HMGN3-202ENST00000344726 GLYATL1P3A0A0U1RQE8 302 aa14.21□□□□□ -0.13
HMGN3-202ENST00000344726 KMOO15229 486 aa14.21□□□□□ -0.13
HMGN3-202ENST00000344726 KRT86O43790 486 aa14.21□□□□□ -0.13
HMGN3-202ENST00000344726 PTMAP06454 111 aaKnown RBP14.21□□□□□ -0.13
HMGN3-202ENST00000344726 JMJD7P0C870 316 aa14.21□□□□□ -0.13
HMGN3-202ENST00000344726 THRAP10827 490 aa14.21□□□□□ -0.13
HMGN3-202ENST00000344726 CTSCP53634 463 aa14.21□□□□□ -0.13
HMGN3-202ENST00000344726 LIMK2P53671 638 aa14.21□□□□□ -0.13
HMGN3-202ENST00000344726 MAPK10P53779 464 aa14.21□□□□□ -0.13
HMGN3-202ENST00000344726 HHEXQ03014 270 aa14.21□□□□□ -0.13
HMGN3-202ENST00000344726 NFATC2Q13469 925 aa14.21□□□□□ -0.13
HMGN3-202ENST00000344726 SQSTM1Q13501 440 aa14.21□□□□□ -0.13
HMGN3-202ENST00000344726 PRPSAP1Q14558 356 aa14.21□□□□□ -0.13
HMGN3-202ENST00000344726 TAF1AQ15573 450 aaPredicted RBP14.21□□□□□ -0.13
HMGN3-202ENST00000344726 INSCQ1MX18 579 aa14.21□□□□□ -0.13
HMGN3-202ENST00000344726 BROXQ5VW32 411 aa14.21□□□□□ -0.13
HMGN3-202ENST00000344726 ZFAND4Q86XD8 727 aa14.21□□□□□ -0.13
HMGN3-202ENST00000344726 LRRC8AQ8IWT6 810 aa14.21□□□□□ -0.13
HMGN3-202ENST00000344726 RASGEF1AQ8N9B8 481 aa14.21□□□□□ -0.13
HMGN3-202ENST00000344726 DDHD1Q8NEL9 900 aa14.21□□□□□ -0.13
HMGN3-202ENST00000344726 OR4K2Q8NGD2 314 aa14.21□□□□□ -0.13
HMGN3-202ENST00000344726 OR13C4Q8NGS5 318 aa14.21□□□□□ -0.13
HMGN3-202ENST00000344726 GDAP1Q8TB36 358 aa14.21□□□□□ -0.13
HMGN3-202ENST00000344726 USP7Q93009 1102 aa14.21□□□□□ -0.13
HMGN3-202ENST00000344726 TIMM29Q9BSF4 260 aa14.21□□□□□ -0.13
HMGN3-202ENST00000344726 MFRPQ9BY79 579 aa14.21□□□□□ -0.13
HMGN3-202ENST00000344726 OSGEPL1Q9H4B0 414 aa14.21□□□□□ -0.13
HMGN3-202ENST00000344726 SARS2Q9NP81 518 aaKnown RBP14.21□□□□□ -0.13
HMGN3-202ENST00000344726 FKBPLQ9UIM3 349 aa14.21□□□□□ -0.13
HMGN3-202ENST00000344726 DNAJC16Q9Y2G8 782 aa14.21□□□□□ -0.13
HMGN3-202ENST00000344726 PKP3Q9Y446 797 aa14.21□□□□□ -0.13
HMGN3-202ENST00000344726 KIR2DS5A0A0G2JLQ3 304 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms