RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 CHRNA6Q15825 494 aa19.88■□□□□ 0.77
SYNE2-201ENST00000341472 INSCQ1MX18 579 aa19.88■□□□□ 0.77
SYNE2-201ENST00000341472 ANKRD20A2Q5SQ80 823 aa19.88■□□□□ 0.77
SYNE2-201ENST00000341472 ANKRD20A1Q5TYW2 823 aa19.88■□□□□ 0.77
SYNE2-201ENST00000341472 ANKRD20A3Q5VUR7 823 aa19.88■□□□□ 0.77
SYNE2-201ENST00000341472 CCDC81Q6ZN84 652 aa19.88■□□□□ 0.77
SYNE2-201ENST00000341472 PEX26Q7Z412 305 aa19.88■□□□□ 0.77
SYNE2-201ENST00000341472 GLT6D1Q7Z4J2 308 aa19.88■□□□□ 0.77
SYNE2-201ENST00000341472 SYCE1Q8N0S2 351 aa19.88■□□□□ 0.77
SYNE2-201ENST00000341472 UBL4BQ8N7F7 174 aa19.88■□□□□ 0.77
SYNE2-201ENST00000341472 LSM14AQ8ND56 463 aaKnown RBP19.88■□□□□ 0.77
SYNE2-201ENST00000341472 AGBL5Q8NDL9 886 aa19.88■□□□□ 0.77
SYNE2-201ENST00000341472 TTC25Q96NG3 672 aa19.88■□□□□ 0.77
SYNE2-201ENST00000341472 CCNL2Q96S94 520 aaPredicted RBP19.88■□□□□ 0.77
SYNE2-201ENST00000341472 FICDQ9BVA6 458 aa19.88■□□□□ 0.77
SYNE2-201ENST00000341472 B3GNT4Q9C0J1 378 aa19.88■□□□□ 0.77
SYNE2-201ENST00000341472 ZMYND15Q9H091 742 aa19.88■□□□□ 0.77
SYNE2-201ENST00000341472 DNAJC16Q9Y2G8 782 aa19.88■□□□□ 0.77
SYNE2-201ENST00000341472 AAR2Q9Y312 384 aaKnown RBP19.88■□□□□ 0.77
SYNE2-201ENST00000341472 ARHGEF17Q96PE2 2063 aaPredicted RBP19.88■□□□□ 0.77
SYNE2-201ENST00000341472 ATXN7O15265 892 aaPredicted RBP19.87■□□□□ 0.77
SYNE2-201ENST00000341472 STX7O15400 261 aaKnown RBP19.87■□□□□ 0.77
SYNE2-201ENST00000341472 BUD23O43709 281 aaKnown RBP19.87■□□□□ 0.77
SYNE2-201ENST00000341472 DUX1O43812 170 aa19.87■□□□□ 0.77
SYNE2-201ENST00000341472 UGT1A9O60656 530 aa19.87■□□□□ 0.77
SYNE2-201ENST00000341472 PPFIA2O75334 1257 aa19.87■□□□□ 0.77
SYNE2-201ENST00000341472 PTMAP06454 111 aaKnown RBP19.87■□□□□ 0.77
SYNE2-201ENST00000341472 UGT1A6P19224 532 aa19.87■□□□□ 0.77
SYNE2-201ENST00000341472 UGT1A1P22309 533 aa19.87■□□□□ 0.77
SYNE2-201ENST00000341472 UGT1A4P22310 534 aa19.87■□□□□ 0.77
SYNE2-201ENST00000341472 CSF2RBP32927 897 aa19.87■□□□□ 0.77
SYNE2-201ENST00000341472 UGT1A3P35503 534 aa19.87■□□□□ 0.77
SYNE2-201ENST00000341472 TGIF1Q15583 401 aa19.87■□□□□ 0.77
SYNE2-201ENST00000341472 KHDC1Q4VXA5 237 aaKnown RBP19.87■□□□□ 0.77
SYNE2-201ENST00000341472 AADACL2Q6P093 401 aa19.87■□□□□ 0.77
SYNE2-201ENST00000341472 RANBP10Q6VN20 620 aa19.87■□□□□ 0.77
SYNE2-201ENST00000341472 TMEM139Q8IV31 216 aa19.87■□□□□ 0.77
SYNE2-201ENST00000341472 SPC24Q8NBT2 197 aa19.87■□□□□ 0.77
SYNE2-201ENST00000341472 SLC39A7Q92504 469 aa19.87■□□□□ 0.77
SYNE2-201ENST00000341472 NCSTNQ92542 709 aa19.87■□□□□ 0.77
SYNE2-201ENST00000341472 TAAR9Q96RI9 348 aa19.87■□□□□ 0.77
SYNE2-201ENST00000341472 FAM118BQ9BPY3 351 aa19.87■□□□□ 0.77
SYNE2-201ENST00000341472 TIMM29Q9BSF4 260 aa19.87■□□□□ 0.77
SYNE2-201ENST00000341472 UGT1A7Q9HAW7 530 aa19.87■□□□□ 0.77
SYNE2-201ENST00000341472 UGT1A10Q9HAW8 530 aa19.87■□□□□ 0.77
SYNE2-201ENST00000341472 UGT1A8Q9HAW9 530 aa19.87■□□□□ 0.77
SYNE2-201ENST00000341472 TMEM9Q9P0T7 183 aa19.87■□□□□ 0.77
SYNE2-201ENST00000341472 PDP2Q9P2J9 529 aa19.87■□□□□ 0.77
SYNE2-201ENST00000341472 PCDHB11Q9Y5F2 797 aa19.87■□□□□ 0.77
SYNE2-201ENST00000341472 GLYATL1P3A0A0U1RQE8 302 aa19.86■□□□□ 0.77
SYNE2-201ENST00000341472 GOLGA6L9A6NEM1 432 aa19.86■□□□□ 0.77
SYNE2-201ENST00000341472 C9orf172C9J069 976 aa19.86■□□□□ 0.77
SYNE2-201ENST00000341472 K7ENP7 123 aa19.86■□□□□ 0.77
SYNE2-201ENST00000341472 TK2O00142 265 aa19.86■□□□□ 0.77
SYNE2-201ENST00000341472 ZNF189O75820 626 aaPredicted RBP19.86■□□□□ 0.77
SYNE2-201ENST00000341472 THRAP10827 490 aa19.86■□□□□ 0.77
SYNE2-201ENST00000341472 FGF3P11487 239 aaPredicted RBP19.86■□□□□ 0.77
SYNE2-201ENST00000341472 VCLP18206 1134 aa19.86■□□□□ 0.77
SYNE2-201ENST00000341472 XRCC1P18887 633 aaPredicted RBP19.86■□□□□ 0.77
SYNE2-201ENST00000341472 IDSP22304 550 aa19.86■□□□□ 0.77
SYNE2-201ENST00000341472 CDC25BP30305 580 aa19.86■□□□□ 0.77
SYNE2-201ENST00000341472 RHDQ02161 417 aa19.86■□□□□ 0.77
SYNE2-201ENST00000341472 PLA2G4EQ3MJ16 856 aa19.86■□□□□ 0.77
SYNE2-201ENST00000341472 INO80CQ6PI98 192 aaPredicted RBP19.86■□□□□ 0.77
SYNE2-201ENST00000341472 WDR74Q6RFH5 385 aaPredicted RBP19.86■□□□□ 0.77
SYNE2-201ENST00000341472 FAM151BQ6UXP7 276 aa19.86■□□□□ 0.77
SYNE2-201ENST00000341472 ZFAND4Q86XD8 727 aa19.86■□□□□ 0.77
SYNE2-201ENST00000341472 ZNF547Q8IVP9 402 aa19.86■□□□□ 0.77
SYNE2-201ENST00000341472 CCDC112Q8NEF3 446 aa19.86■□□□□ 0.77
SYNE2-201ENST00000341472 SNRNP27Q8WVK2 155 aaKnown RBP19.86■□□□□ 0.77
SYNE2-201ENST00000341472 EPB41L1Q9H4G0 881 aa19.86■□□□□ 0.77
SYNE2-201ENST00000341472 TRIM10Q9UDY6 481 aa19.86■□□□□ 0.77
SYNE2-201ENST00000341472 FASNP49327 2511 aaKnown RBP19.86■□□□□ 0.77
SYNE2-201ENST00000341472 C2orf81A6NN90 581 aa19.85■□□□□ 0.77
SYNE2-201ENST00000341472 PDZK1P1A8MUH7 402 aa19.85■□□□□ 0.77
SYNE2-201ENST00000341472 MIF4GDA9UHW6 222 aaKnown RBP19.85■□□□□ 0.77
SYNE2-201ENST00000341472 KCNJ13O60928 360 aa19.85■□□□□ 0.77
SYNE2-201ENST00000341472 VIPP01282 170 aa19.85■□□□□ 0.77
SYNE2-201ENST00000341472 LIPCP11150 499 aa19.85■□□□□ 0.77
SYNE2-201ENST00000341472 CD82P27701 267 aa19.85■□□□□ 0.77
SYNE2-201ENST00000341472 ADRA1AP35348 466 aa19.85■□□□□ 0.77
SYNE2-201ENST00000341472 MAPK9P45984 424 aa19.85■□□□□ 0.77
SYNE2-201ENST00000341472 EPHA4P54764 986 aa19.85■□□□□ 0.77
SYNE2-201ENST00000341472 UBE2IP63279 158 aaKnown RBP19.85■□□□□ 0.77
SYNE2-201ENST00000341472 COL9A2Q14055 689 aaPredicted RBP19.85■□□□□ 0.77
SYNE2-201ENST00000341472 SNAP47Q5SQN1 464 aa19.85■□□□□ 0.77
SYNE2-201ENST00000341472 LDLRAP1Q5SW96 308 aa19.85■□□□□ 0.77
SYNE2-201ENST00000341472 ABRAXAS1Q6UWZ7 409 aa19.85■□□□□ 0.77
SYNE2-201ENST00000341472 TRAPPC5Q8IUR0 188 aa19.85■□□□□ 0.77
SYNE2-201ENST00000341472 TRIM48Q8IWZ4 208 aa19.85■□□□□ 0.77
SYNE2-201ENST00000341472 TTC13Q8NBP0 860 aa19.85■□□□□ 0.77
SYNE2-201ENST00000341472 CCDC110Q8TBZ0 833 aa19.85■□□□□ 0.77
SYNE2-201ENST00000341472 ZNF398Q8TD17 642 aa19.85■□□□□ 0.77
SYNE2-201ENST00000341472 SPATA13Q96N96 652 aa19.85■□□□□ 0.77
SYNE2-201ENST00000341472 PPP1R2P1Q96PQ5 205 aa19.85■□□□□ 0.77
SYNE2-201ENST00000341472 APOL2Q9BQE5 337 aa19.85■□□□□ 0.77
SYNE2-201ENST00000341472 DESI2Q9BSY9 194 aa19.85■□□□□ 0.77
SYNE2-201ENST00000341472 FOXJ2Q9P0K8 574 aa19.85■□□□□ 0.77
SYNE2-201ENST00000341472 SCHIP1Q9P0W5 487 aaPredicted RBP19.85■□□□□ 0.77
SYNE2-201ENST00000341472 PCDHGA3Q9Y5H0 932 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms