RNA–Protein interactions for RNA: ENST00000340677.9

CDK11B-201, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-201ENST00000340677 DNAJB8Q8NHS0 232 aa16.83■□□□□ 0.28
CDK11B-201ENST00000340677 ZFP90Q8TF47 636 aa16.83■□□□□ 0.28
CDK11B-201ENST00000340677 VRK1Q99986 396 aaPredicted RBP16.83■□□□□ 0.28
CDK11B-201ENST00000340677 AGPAT3Q9NRZ7 376 aa16.83■□□□□ 0.28
CDK11B-201ENST00000340677 CCDC59Q9P031 241 aaKnown RBP16.83■□□□□ 0.28
CDK11B-201ENST00000340677 ARMCX3Q9UH62 379 aaPredicted RBP16.83■□□□□ 0.28
CDK11B-201ENST00000340677 PLCL2Q9UPR0 1127 aa16.83■□□□□ 0.28
CDK11B-201ENST00000340677 HSPE1-MOB4S4R3N1 261 aa16.83■□□□□ 0.28
CDK11B-201ENST00000340677 A0A087X0T9 212 aa16.82■□□□□ 0.28
CDK11B-201ENST00000340677 PDZK1P1A8MUH7 402 aa16.82■□□□□ 0.28
CDK11B-201ENST00000340677 FCHO1O14526 889 aa16.82■□□□□ 0.28
CDK11B-201ENST00000340677 NOL4O94818 638 aa16.82■□□□□ 0.28
CDK11B-201ENST00000340677 WDPCPO95876 746 aa16.82■□□□□ 0.28
CDK11B-201ENST00000340677 S100A9P06702 114 aaKnown RBP16.82■□□□□ 0.28
CDK11B-201ENST00000340677 ANXA8P13928 327 aa16.82■□□□□ 0.28
CDK11B-201ENST00000340677 GNG10P50151 68 aa16.82■□□□□ 0.28
CDK11B-201ENST00000340677 TSPAN5P62079 268 aa16.82■□□□□ 0.28
CDK11B-201ENST00000340677 KCNJ11Q14654 390 aa16.82■□□□□ 0.28
CDK11B-201ENST00000340677 TMEM44Q2T9K0 475 aa16.82■□□□□ 0.28
CDK11B-201ENST00000340677 ANXA8L1Q5VT79 327 aa16.82■□□□□ 0.28
CDK11B-201ENST00000340677 BBS12Q6ZW61 710 aa16.82■□□□□ 0.28
CDK11B-201ENST00000340677 RNF34Q969K3 372 aa16.82■□□□□ 0.28
CDK11B-201ENST00000340677 CAMK1GQ96NX5 476 aa16.82■□□□□ 0.28
CDK11B-201ENST00000340677 QRFPRQ96P65 431 aa16.82■□□□□ 0.28
CDK11B-201ENST00000340677 ZCCHC4Q9H5U6 513 aa16.82■□□□□ 0.28
CDK11B-201ENST00000340677 PLSCR2Q9NRY7 297 aa16.82■□□□□ 0.28
CDK11B-201ENST00000340677 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.82■□□□□ 0.28
CDK11B-201ENST00000340677 ZNF69Q9UC07 566 aa16.82■□□□□ 0.28
CDK11B-201ENST00000340677 PARP2Q9UGN5 583 aa16.82■□□□□ 0.28
CDK11B-201ENST00000340677 ADAMTS1Q9UHI8 967 aa16.82■□□□□ 0.28
CDK11B-201ENST00000340677 STOML2Q9UJZ1 356 aa16.82■□□□□ 0.28
CDK11B-201ENST00000340677 RAB23Q9ULC3 237 aa16.82■□□□□ 0.28
CDK11B-201ENST00000340677 PCDHGA7Q9Y5G6 932 aa16.82■□□□□ 0.28
CDK11B-201ENST00000340677 DOCK3Q8IZD9 2030 aa16.82■□□□□ 0.28
CDK11B-201ENST00000340677 PQLC2LA1A4F0 135 aa16.81■□□□□ 0.28
CDK11B-201ENST00000340677 NOP56O00567 594 aaKnown RBP16.81■□□□□ 0.28
CDK11B-201ENST00000340677 TM4SF4P48230 202 aa16.81■□□□□ 0.28
CDK11B-201ENST00000340677 DIO1P49895 249 aa16.81■□□□□ 0.28
CDK11B-201ENST00000340677 ADAM15Q13444 863 aa16.81■□□□□ 0.28
CDK11B-201ENST00000340677 EMC2Q15006 297 aa16.81■□□□□ 0.28
CDK11B-201ENST00000340677 NOXA1Q86UR1 476 aa16.81■□□□□ 0.28
CDK11B-201ENST00000340677 LACC1Q8IV20 430 aa16.81■□□□□ 0.28
CDK11B-201ENST00000340677 ZSCAN1Q8NBB4 408 aa16.81■□□□□ 0.28
CDK11B-201ENST00000340677 TMEM161BQ8NDZ6 487 aa16.81■□□□□ 0.28
CDK11B-201ENST00000340677 SETD7Q8WTS6 366 aaKnown RBP16.81■□□□□ 0.28
CDK11B-201ENST00000340677 EDARADDQ8WWZ3 215 aa16.81■□□□□ 0.28
CDK11B-201ENST00000340677 TMEM121Q9BTD3 319 aa16.81■□□□□ 0.28
CDK11B-201ENST00000340677 BDH2Q9BUT1 245 aa16.81■□□□□ 0.28
CDK11B-201ENST00000340677 BBS2Q9BXC9 721 aa16.81■□□□□ 0.28
CDK11B-201ENST00000340677 ABHD16BQ9H3Z7 469 aa16.81■□□□□ 0.28
CDK11B-201ENST00000340677 ZSWIM8A7E2V4 1837 aa16.81■□□□□ 0.28
CDK11B-201ENST00000340677 SSU72P8A0A1W2PR75 194 aa16.81■□□□□ 0.28
CDK11B-201ENST00000340677 RPL10P27635 214 aaKnown RBP16.81■□□□□ 0.28
CDK11B-201ENST00000340677 GDI1P31150 447 aa16.81■□□□□ 0.28
CDK11B-201ENST00000340677 HTR3AP46098 478 aa16.81■□□□□ 0.28
CDK11B-201ENST00000340677 RPL10AP62906 217 aaKnown RBP16.81■□□□□ 0.28
CDK11B-201ENST00000340677 ZNF33AQ06730 810 aa16.81■□□□□ 0.28
CDK11B-201ENST00000340677 ORC1Q13415 861 aa16.81■□□□□ 0.28
CDK11B-201ENST00000340677 PSMD5Q16401 504 aa16.81■□□□□ 0.28
CDK11B-201ENST00000340677 PFKFB4Q16877 469 aa16.81■□□□□ 0.28
CDK11B-201ENST00000340677 TYSND1Q2T9J0 566 aa16.81■□□□□ 0.28
CDK11B-201ENST00000340677 ZCCHC12Q6PEW1 402 aa16.81■□□□□ 0.28
CDK11B-201ENST00000340677 SPOCD1Q6ZMY3 1216 aa16.81■□□□□ 0.28
CDK11B-201ENST00000340677 HORMAD1Q86X24 394 aa16.81■□□□□ 0.28
CDK11B-201ENST00000340677 CARM1Q86X55 608 aa16.81■□□□□ 0.28
CDK11B-201ENST00000340677 MAP4K3Q8IVH8 894 aa16.81■□□□□ 0.28
CDK11B-201ENST00000340677 SGTBQ96EQ0 304 aa16.81■□□□□ 0.28
CDK11B-201ENST00000340677 PWWP2AQ96N64 755 aa16.81■□□□□ 0.28
CDK11B-201ENST00000340677 OSBPL11Q9BXB4 747 aa16.81■□□□□ 0.28
CDK11B-201ENST00000340677 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.81■□□□□ 0.28
CDK11B-201ENST00000340677 SAGE1Q9NXZ1 904 aa16.81■□□□□ 0.28
CDK11B-201ENST00000340677 PCDHA3Q9Y5H8 950 aa16.81■□□□□ 0.28
CDK11B-201ENST00000340677 TRPV2Q9Y5S1 764 aa16.81■□□□□ 0.28
CDK11B-201ENST00000340677 DCLK1O15075 740 aa16.8■□□□□ 0.28
CDK11B-201ENST00000340677 GPR37O15354 613 aa16.8■□□□□ 0.28
CDK11B-201ENST00000340677 RHOBTB1O94844 696 aa16.8■□□□□ 0.28
CDK11B-201ENST00000340677 SNAI1O95863 264 aaPredicted RBP16.8■□□□□ 0.28
CDK11B-201ENST00000340677 CHRNA1P02708 482 aa16.8■□□□□ 0.28
CDK11B-201ENST00000340677 SERPING1P05155 500 aa16.8■□□□□ 0.28
CDK11B-201ENST00000340677 PDHA2P29803 388 aa16.8■□□□□ 0.28
CDK11B-201ENST00000340677 GPX4P36969 197 aaPredicted RBP16.8■□□□□ 0.28
CDK11B-201ENST00000340677 UBE2IP63279 158 aaKnown RBP16.8■□□□□ 0.28
CDK11B-201ENST00000340677 ARHGAP1Q07960 439 aa16.8■□□□□ 0.28
CDK11B-201ENST00000340677 PUDPQ08623 228 aa16.8■□□□□ 0.28
CDK11B-201ENST00000340677 INCA1Q0VD86 236 aa16.8■□□□□ 0.28
CDK11B-201ENST00000340677 OVGP1Q12889 678 aa16.8■□□□□ 0.28
CDK11B-201ENST00000340677 MAP2K5Q13163 448 aa16.8■□□□□ 0.28
CDK11B-201ENST00000340677 RPS6KA1Q15418 735 aa16.8■□□□□ 0.28
CDK11B-201ENST00000340677 GPAT4Q86UL3 456 aa16.8■□□□□ 0.28
CDK11B-201ENST00000340677 ZNF248Q8NDW4 579 aa16.8■□□□□ 0.28
CDK11B-201ENST00000340677 PGAP3Q96FM1 320 aaPredicted RBP16.8■□□□□ 0.28
CDK11B-201ENST00000340677 SPATA33Q96N06 139 aa16.8■□□□□ 0.28
CDK11B-201ENST00000340677 TINF2Q9BSI4 451 aa16.8■□□□□ 0.28
CDK11B-201ENST00000340677 NAT9Q9BTE0 207 aa16.8■□□□□ 0.28
CDK11B-201ENST00000340677 PSMD13Q9UNM6 376 aa16.8■□□□□ 0.28
CDK11B-201ENST00000340677 PIPSLA2A3N6 862 aa16.8■□□□□ 0.28
CDK11B-201ENST00000340677 TRABD2BA6NFA1 517 aa16.8■□□□□ 0.28
CDK11B-201ENST00000340677 CLDN3O15551 220 aa16.8■□□□□ 0.28
CDK11B-201ENST00000340677 SORBS2O94875 1100 aaKnown RBP16.8■□□□□ 0.28
CDK11B-201ENST00000340677 FGFR1P11362 822 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms