RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 NCBP2-AS2Q69YL0 99 aa12.7□□□□□ -0.38
LIN54-201ENST00000340417 ZNF248Q8NDW4 579 aa12.7□□□□□ -0.38
LIN54-201ENST00000340417 CATSPER2Q96P56 530 aa12.7□□□□□ -0.38
LIN54-201ENST00000340417 ANKHQ9HCJ1 492 aa12.7□□□□□ -0.38
LIN54-201ENST00000340417 IGLON5A6NGN9 336 aa12.7□□□□□ -0.38
LIN54-201ENST00000340417 SLC25A12O75746 678 aa12.7□□□□□ -0.38
LIN54-201ENST00000340417 PTP4A2Q12974 167 aa12.7□□□□□ -0.38
LIN54-201ENST00000340417 CCNYL2Q5T2Q4 361 aa12.7□□□□□ -0.38
LIN54-201ENST00000340417 FAM171BQ6P995 826 aa12.7□□□□□ -0.38
LIN54-201ENST00000340417 C15orf39Q6ZRI6 1047 aa12.7□□□□□ -0.38
LIN54-201ENST00000340417 R3HCC1LQ7Z5L2 792 aaKnown RBP12.7□□□□□ -0.38
LIN54-201ENST00000340417 MR1Q95460 341 aa12.7□□□□□ -0.38
LIN54-201ENST00000340417 ZDHHC12Q96GR4 267 aa12.7□□□□□ -0.38
LIN54-201ENST00000340417 RXFP1Q9HBX9 757 aa12.7□□□□□ -0.38
LIN54-201ENST00000340417 ANKRD66B4E2M5 251 aa12.7□□□□□ -0.38
LIN54-201ENST00000340417 THRAP10827 490 aa12.7□□□□□ -0.38
LIN54-201ENST00000340417 TSPAN8P19075 237 aa12.7□□□□□ -0.38
LIN54-201ENST00000340417 CTGFP29279 349 aa12.7□□□□□ -0.38
LIN54-201ENST00000340417 AFF1P51825 1210 aaKnown RBP12.7□□□□□ -0.38
LIN54-201ENST00000340417 SLC13A2Q13183 592 aa12.7□□□□□ -0.38
LIN54-201ENST00000340417 KRT73Q86Y46 540 aa12.7□□□□□ -0.38
LIN54-201ENST00000340417 OR4E2Q8NGC2 313 aa12.7□□□□□ -0.38
LIN54-201ENST00000340417 MSANTD3Q96H12 275 aa12.7□□□□□ -0.38
LIN54-201ENST00000340417 PPP3R2Q96LZ3 170 aa12.7□□□□□ -0.38
LIN54-201ENST00000340417 POLR1BQ9H9Y6 1135 aa12.7□□□□□ -0.38
LIN54-201ENST00000340417 SLCO3A1Q9UIG8 710 aa12.7□□□□□ -0.38
LIN54-201ENST00000340417 ADAM12O43184 909 aa12.7□□□□□ -0.38
LIN54-201ENST00000340417 PI15O43692 258 aa12.7□□□□□ -0.38
LIN54-201ENST00000340417 DUX1O43812 170 aa12.7□□□□□ -0.38
LIN54-201ENST00000340417 MATN4O95460 622 aa12.7□□□□□ -0.38
LIN54-201ENST00000340417 RPS7P62081 194 aaKnown RBP12.7□□□□□ -0.38
LIN54-201ENST00000340417 RASA2Q15283 850 aa12.7□□□□□ -0.38
LIN54-201ENST00000340417 C3orf58Q8NDZ4 430 aa12.7□□□□□ -0.38
LIN54-201ENST00000340417 OR13C4Q8NGS5 318 aa12.7□□□□□ -0.38
LIN54-201ENST00000340417 RBM18Q96H35 190 aaKnown RBP12.7□□□□□ -0.38
LIN54-201ENST00000340417 RETREG1Q9H6L5 497 aa12.7□□□□□ -0.38
LIN54-201ENST00000340417 ZBTB42B2RXF5 422 aa12.7□□□□□ -0.38
LIN54-201ENST00000340417 B3GALT2O43825 422 aa12.7□□□□□ -0.38
LIN54-201ENST00000340417 EPN2O95208 641 aa12.7□□□□□ -0.38
LIN54-201ENST00000340417 RABIFP47224 123 aa12.7□□□□□ -0.38
LIN54-201ENST00000340417 AP2B1P63010 937 aa12.7□□□□□ -0.38
LIN54-201ENST00000340417 ADGRG2Q8IZP9 1017 aa12.7□□□□□ -0.38
LIN54-201ENST00000340417 ICA1LQ8NDH6 482 aa12.7□□□□□ -0.38
LIN54-201ENST00000340417 FIBINQ8TAL6 211 aa12.7□□□□□ -0.38
LIN54-201ENST00000340417 IGSF8Q969P0 613 aa12.7□□□□□ -0.38
LIN54-201ENST00000340417 NRBF2Q96F24 287 aa12.7□□□□□ -0.38
LIN54-201ENST00000340417 GAL3ST4Q96RP7 486 aa12.7□□□□□ -0.38
LIN54-201ENST00000340417 EIF2B4Q9UI10 523 aaKnown RBP12.7□□□□□ -0.38
LIN54-201ENST00000340417 GTF2A1LQ9UNN4 478 aa12.7□□□□□ -0.38
LIN54-201ENST00000340417 STK16O75716 305 aa12.69□□□□□ -0.38
LIN54-201ENST00000340417 ATP1B2P14415 290 aaPredicted RBP12.69□□□□□ -0.38
LIN54-201ENST00000340417 CD70P32970 193 aa12.69□□□□□ -0.38
LIN54-201ENST00000340417 SIRPB2Q5JXA9 342 aa12.69□□□□□ -0.38
LIN54-201ENST00000340417 ARHGAP40Q5TG30 622 aa12.69□□□□□ -0.38
LIN54-201ENST00000340417 ZNF555Q8NEP9 628 aa12.69□□□□□ -0.38
LIN54-201ENST00000340417 ADCY4Q8NFM4 1077 aa12.69□□□□□ -0.38
LIN54-201ENST00000340417 TOE1Q96GM8 510 aaKnown RBP12.69□□□□□ -0.38
LIN54-201ENST00000340417 PIF1Q9H611 641 aa12.69□□□□□ -0.38
LIN54-201ENST00000340417 EFCAB1Q9HAE3 211 aa12.69□□□□□ -0.38
LIN54-201ENST00000340417 C3orf14Q9HBI5 128 aa12.69□□□□□ -0.38
LIN54-201ENST00000340417 R3HDM2Q9Y2K5 976 aaKnown RBP12.69□□□□□ -0.38
LIN54-201ENST00000340417 SNX5Q9Y5X3 404 aa12.69□□□□□ -0.38
LIN54-201ENST00000340417 MAST2Q6P0Q8 1798 aa12.69□□□□□ -0.38
LIN54-201ENST00000340417 A6NCN8 305 aa12.69□□□□□ -0.38
LIN54-201ENST00000340417 LRRC14BA6NHZ5 514 aa12.69□□□□□ -0.38
LIN54-201ENST00000340417 ITPKBP27987 946 aa12.69□□□□□ -0.38
LIN54-201ENST00000340417 DRG2P55039 364 aaKnown RBP12.69□□□□□ -0.38
LIN54-201ENST00000340417 RPL26P61254 145 aaKnown RBP12.69□□□□□ -0.38
LIN54-201ENST00000340417 ESRRGP62508 458 aa12.69□□□□□ -0.38
LIN54-201ENST00000340417 MRPS21P82921 87 aaKnown RBP12.69□□□□□ -0.38
LIN54-201ENST00000340417 PWP1Q13610 501 aa12.69□□□□□ -0.38
LIN54-201ENST00000340417 CAB39LQ9H9S4 337 aa12.69□□□□□ -0.38
LIN54-201ENST00000340417 RPL26L1Q9UNX3 145 aaKnown RBP12.69□□□□□ -0.38
LIN54-201ENST00000340417 CHURC1-FNTBB4DL54 471 aa12.69□□□□□ -0.38
LIN54-201ENST00000340417 SOCS5O75159 536 aa12.69□□□□□ -0.38
LIN54-201ENST00000340417 RECQL5O94762 991 aaPredicted RBP12.69□□□□□ -0.38
LIN54-201ENST00000340417 HIST1H2ABP04908 130 aa12.69□□□□□ -0.38
LIN54-201ENST00000340417 LAMP2P13473 410 aa12.69□□□□□ -0.38
LIN54-201ENST00000340417 MED27Q6P2C8 311 aa12.69□□□□□ -0.38
LIN54-201ENST00000340417 HIST3H2AQ7L7L0 130 aa12.69□□□□□ -0.38
LIN54-201ENST00000340417 APTXQ7Z2E3 356 aaKnown RBP12.69□□□□□ -0.38
LIN54-201ENST00000340417 CREG2Q8IUH2 290 aa12.69□□□□□ -0.38
LIN54-201ENST00000340417 TMEM130Q8N3G9 435 aa12.69□□□□□ -0.38
LIN54-201ENST00000340417 TMEM145Q8NBT3 493 aa12.69□□□□□ -0.38
LIN54-201ENST00000340417 HIST1H2ACQ93077 130 aa12.69□□□□□ -0.38
LIN54-201ENST00000340417 SNX15Q9NRS6 342 aa12.69□□□□□ -0.38
LIN54-201ENST00000340417 NMBRP28336 390 aa12.69□□□□□ -0.38
LIN54-201ENST00000340417 CRATP43155 626 aa12.69□□□□□ -0.38
LIN54-201ENST00000340417 COPAP53621 1224 aa12.69□□□□□ -0.38
LIN54-201ENST00000340417 RPL38P63173 70 aaKnown RBP12.69□□□□□ -0.38
LIN54-201ENST00000340417 BIKQ13323 160 aa12.69□□□□□ -0.38
LIN54-201ENST00000340417 APCDD1Q8J025 514 aa12.69□□□□□ -0.38
LIN54-201ENST00000340417 STX19Q8N4C7 294 aa12.69□□□□□ -0.38
LIN54-201ENST00000340417 POMGNT2Q8NAT1 580 aa12.69□□□□□ -0.38
LIN54-201ENST00000340417 HSPA12BQ96MM6 686 aa12.69□□□□□ -0.38
LIN54-201ENST00000340417 TCF7L2Q9NQB0 619 aa12.69□□□□□ -0.38
LIN54-201ENST00000340417 FBXW2Q9UKT8 454 aa12.69□□□□□ -0.38
LIN54-201ENST00000340417 H0Y3Z8 333 aa12.69□□□□□ -0.38
LIN54-201ENST00000340417 SNCBQ16143 134 aa12.69□□□□□ -0.38
LIN54-201ENST00000340417 RNASEH2BQ5TBB1 312 aaKnown RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms