RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 UGT2B10P36537 528 aa9.58□□□□□ -0.88
PTCHD4-201ENST00000339488 GP5P40197 560 aa9.58□□□□□ -0.88
PTCHD4-201ENST00000339488 ARFIP1P53367 373 aa9.58□□□□□ -0.88
PTCHD4-201ENST00000339488 RGS1Q08116 209 aa9.58□□□□□ -0.88
PTCHD4-201ENST00000339488 RIN1Q13671 783 aa9.58□□□□□ -0.88
PTCHD4-201ENST00000339488 FASTKQ14296 549 aaKnown RBP9.58□□□□□ -0.88
PTCHD4-201ENST00000339488 LTB4RQ15722 352 aa9.58□□□□□ -0.88
PTCHD4-201ENST00000339488 KIF19Q2TAC6 998 aa9.58□□□□□ -0.88
PTCHD4-201ENST00000339488 PADI6Q6TGC4 694 aa9.58□□□□□ -0.88
PTCHD4-201ENST00000339488 OTOP2Q7RTS6 562 aa9.58□□□□□ -0.88
PTCHD4-201ENST00000339488 CNTD1Q8N815 330 aa9.58□□□□□ -0.88
PTCHD4-201ENST00000339488 SLC30A3Q99726 388 aa9.58□□□□□ -0.88
PTCHD4-201ENST00000339488 CNPY3Q9BT09 278 aa9.58□□□□□ -0.88
PTCHD4-201ENST00000339488 ISCA1Q9BUE6 129 aa9.58□□□□□ -0.88
PTCHD4-201ENST00000339488 ZNF416Q9BWM5 594 aa9.58□□□□□ -0.88
PTCHD4-201ENST00000339488 ACTR6Q9GZN1 396 aa9.58□□□□□ -0.88
PTCHD4-201ENST00000339488 STARD7Q9NQZ5 370 aa9.58□□□□□ -0.88
PTCHD4-201ENST00000339488 HPF1Q9NWY4 346 aa9.58□□□□□ -0.88
PTCHD4-201ENST00000339488 INTS6Q9UL03 887 aaKnown RBP9.58□□□□□ -0.88
PTCHD4-201ENST00000339488 DLEC1Q9Y238 1755 aa9.58□□□□□ -0.88
PTCHD4-201ENST00000339488 ARPC2O15144 300 aa9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 PMPCBO75439 489 aa9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 ATP6AP2O75787 350 aa9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 CYP3A4P08684 503 aa9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 CHRM5P08912 532 aaPredicted RBP9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 DNAJB1P25685 340 aa9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 GRK3P35626 688 aa9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 ATN1P54259 1190 aaPredicted RBP9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 NAGLUP54802 743 aa9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 KCNK10P57789 538 aa9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 SCRN3Q0VDG4 424 aa9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 INPP5AQ14642 412 aa9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 CLCA4Q14CN2 919 aa9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 PSMD5Q16401 504 aa9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 SMN1Q16637 294 aaKnown RBP9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 SPDYE7PQ495Y7 208 aa9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 SAMD4BQ5PRF9 694 aaKnown RBP9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 C12orf60Q5U649 245 aa9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 PLD5Q8N7P1 536 aa9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 OR10T2Q8NGX3 314 aa9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 RNF145Q96MT1 663 aa9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 AMBRA1Q9C0C7 1298 aa9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 PNPLA8Q9NP80 782 aa9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 FBXO10Q9UK96 956 aa9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 PRELID3BQ9Y3B1 194 aa9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 CNTNAP1P78357 1384 aa9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 DOT1LQ8TEK3 1739 aa9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 TRAV19A0A0A6YYK7 116 aa9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 G3V2L1 256 aa9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 H0Y626 953 aa9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 ALDH1A1P00352 501 aa9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 MT-ND2P03891 347 aa9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 THRBP10828 461 aa9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 APEHP13798 732 aaKnown RBP9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 RFX1P22670 979 aa9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 ERP29P30040 261 aaKnown RBP9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 CD6P30203 668 aa9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 TRIM23P36406 574 aa9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 BRCC3P46736 316 aa9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 GRIA4P48058 902 aa9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 GLUD2P49448 558 aa9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 RPL14P50914 215 aaKnown RBP9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 TRAP1Q12931 704 aaKnown RBP9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 CCINQ13939 588 aa9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 PDSS1Q5T2R2 415 aa9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 ZBTB37Q5TC79 503 aa9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 RETSATQ6NUM9 610 aa9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 KDELC1Q6UW63 502 aa9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 CHMP1BQ7LBR1 199 aa9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 SNX20Q7Z614 316 aa9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 ZBTB33Q86T24 672 aa9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 RETREG3Q86VR2 466 aa9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 KIF18BQ86Y91 864 aa9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 CBWD2Q8IUF1 395 aa9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 SPATA6LQ8N4H0 392 aa9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 ARRDC4Q8NCT1 418 aa9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 BEST2Q8NFU1 509 aa9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 SLC2A14Q8TDB8 520 aa9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 TMCO6Q96DC7 493 aa9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 GFM1Q96RP9 751 aaKnown RBP9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 YTHDF1Q9BYJ9 559 aaKnown RBP9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 IL20Q9NYY1 176 aa9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 HSPBP1Q9NZL4 362 aa9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 PFDN2Q9UHV9 154 aa9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 BRWD3Q6RI45 1802 aa9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 WDR27A2RRH5 827 aa9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 FAM159BA6NKW6 160 aa9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 TTLL8A6PVC2 850 aa9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 SPATA31C2B4DYI2 1134 aa9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 EEF2KO00418 725 aaKnown RBP9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 PPP1R11O60927 126 aaPredicted RBP9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 MED26O95402 600 aa9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 NR3C2P08235 984 aa9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 CYP4B1P13584 511 aa9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 HOXB1P14653 301 aaPredicted RBP9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 HOXA7P31268 230 aaPredicted RBP9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 ATP5OP48047 213 aa9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 EPHA5P54756 1037 aa9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 ARSFP54793 590 aa9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 CABP4P57796 275 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms