RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 CPXM1Q96SM3 734 aa5.55□□□□□ -1.52
CSDE1-202ENST00000339438 MBOAT4Q96T53 435 aa5.55□□□□□ -1.52
CSDE1-202ENST00000339438 C17orf62Q9BQA9 187 aa5.55□□□□□ -1.52
CSDE1-202ENST00000339438 C9orf16Q9BUW7 83 aa5.55□□□□□ -1.52
CSDE1-202ENST00000339438 GON7Q9BXV9 100 aa5.55□□□□□ -1.52
CSDE1-202ENST00000339438 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.55□□□□□ -1.523e-6■■□□□ 12
CSDE1-202ENST00000339438 ZNF304Q9HCX3 659 aa5.55□□□□□ -1.52
CSDE1-202ENST00000339438 TNFRSF12AQ9NP84 129 aa5.55□□□□□ -1.52
CSDE1-202ENST00000339438 IL23AQ9NPF7 189 aa5.55□□□□□ -1.52
CSDE1-202ENST00000339438 C8orf4Q9NR00 106 aa5.55□□□□□ -1.52
CSDE1-202ENST00000339438 PAQR5Q9NXK6 330 aaPredicted RBP5.55□□□□□ -1.52
CSDE1-202ENST00000339438 MAP10Q9P2G4 905 aa5.55□□□□□ -1.52
CSDE1-202ENST00000339438 RAP2CQ9Y3L5 183 aa5.55□□□□□ -1.52
CSDE1-202ENST00000339438 PCDHA10Q9Y5I2 948 aa5.55□□□□□ -1.52
CSDE1-202ENST00000339438 NRCAMQ92823 1304 aa5.55□□□□□ -1.52
CSDE1-202ENST00000339438 TEX51A0A1B0GUA7 166 aa5.55□□□□□ -1.52
CSDE1-202ENST00000339438 CCDC78A2IDD5 438 aa5.55□□□□□ -1.52
CSDE1-202ENST00000339438 AQP12BA6NM10 295 aa5.55□□□□□ -1.52
CSDE1-202ENST00000339438 SNTNA6NMZ2 147 aa5.55□□□□□ -1.52
CSDE1-202ENST00000339438 METTL18O95568 372 aa5.55□□□□□ -1.52
CSDE1-202ENST00000339438 GLP2RO95838 553 aa5.55□□□□□ -1.52
CSDE1-202ENST00000339438 RBP1P09455 135 aa5.55□□□□□ -1.52
CSDE1-202ENST00000339438 ZNF286BP0CG31 522 aa5.55□□□□□ -1.52
CSDE1-202ENST00000339438 IL7RP16871 459 aa5.55□□□□□ -1.52
CSDE1-202ENST00000339438 HTR2BP41595 481 aa5.55□□□□□ -1.52
CSDE1-202ENST00000339438 RPL14P50914 215 aaKnown RBP5.55□□□□□ -1.52
CSDE1-202ENST00000339438 VBP1P61758 197 aa5.55□□□□□ -1.52
CSDE1-202ENST00000339438 EMX1Q04741 257 aaPredicted RBP5.55□□□□□ -1.52
CSDE1-202ENST00000339438 POLD3Q15054 466 aaPredicted RBP5.55□□□□□ -1.52
CSDE1-202ENST00000339438 PSMD5Q16401 504 aa5.55□□□□□ -1.52
CSDE1-202ENST00000339438 FAM214AQ32MH5 1076 aa5.55□□□□□ -1.52
CSDE1-202ENST00000339438 SEZ6Q53EL9 994 aa5.55□□□□□ -1.52
CSDE1-202ENST00000339438 TOR2AQ5JU69 321 aa5.55□□□□□ -1.52
CSDE1-202ENST00000339438 TSTD2Q5T7W7 516 aa5.55□□□□□ -1.52
CSDE1-202ENST00000339438 RSBN1Q5VWQ0 802 aaPredicted RBP5.55□□□□□ -1.52
CSDE1-202ENST00000339438 ERAP2Q6P179 960 aa5.55□□□□□ -1.52
CSDE1-202ENST00000339438 TXNDC11Q6PKC3 985 aa5.55□□□□□ -1.52
CSDE1-202ENST00000339438 AQP12AQ8IXF9 295 aa5.55□□□□□ -1.52
CSDE1-202ENST00000339438 RIMKLAQ8IXN7 391 aa5.55□□□□□ -1.52
CSDE1-202ENST00000339438 DDIASQ8IXT1 998 aa5.55□□□□□ -1.52
CSDE1-202ENST00000339438 THNSL1Q8IYQ7 743 aa5.55□□□□□ -1.52
CSDE1-202ENST00000339438 DHRSXQ8N5I4 330 aa5.55□□□□□ -1.52
CSDE1-202ENST00000339438 AGR3Q8TD06 166 aa5.55□□□□□ -1.52
CSDE1-202ENST00000339438 SUSD6Q92537 303 aa5.55□□□□□ -1.52
CSDE1-202ENST00000339438 RPL10LQ96L21 214 aaKnown RBP5.55□□□□□ -1.52
CSDE1-202ENST00000339438 HEXIM2Q96MH2 286 aaKnown RBP5.55□□□□□ -1.52
CSDE1-202ENST00000339438 PEBP4Q96S96 227 aa5.55□□□□□ -1.52
CSDE1-202ENST00000339438 MRPL9Q9BYD2 267 aaKnown RBP5.55□□□□□ -1.52
CSDE1-202ENST00000339438 PBX4Q9BYU1 374 aa5.55□□□□□ -1.52
CSDE1-202ENST00000339438 IL22Q9GZX6 179 aa5.55□□□□□ -1.52
CSDE1-202ENST00000339438 ADA2Q9NZK5 511 aa5.55□□□□□ -1.52
CSDE1-202ENST00000339438 AP3M1Q9Y2T2 418 aa5.55□□□□□ -1.52
CSDE1-202ENST00000339438 AGAP5A6NIR3 686 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 C12orf71A8MTZ7 269 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 CAPN5O15484 640 aaPredicted RBP5.54□□□□□ -1.52
CSDE1-202ENST00000339438 ALPLP05186 524 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 ZNF30P17039 623 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 CYP2A7P20853 494 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 EEF1DP29692 281 aaKnown RBP5.54□□□□□ -1.52
CSDE1-202ENST00000339438 ETV6P41212 452 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 RFX2P48378 723 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 PSEN2P49810 448 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 ART3Q13508 389 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 RAB6CQ53S08 254 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 ARL13AQ5H913 290 aaPredicted RBP5.54□□□□□ -1.52
CSDE1-202ENST00000339438 CLLU1OSQ5K130 101 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 FAM122CQ6P4D5 195 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 DHFR2Q86XF0 187 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 PSMA8Q8TAA3 256 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 PIK3R3Q92569 461 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 HDAC2Q92769 488 aaKnown RBP5.54□□□□□ -1.52
CSDE1-202ENST00000339438 COQ7Q99807 217 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 TTYH2Q9BSA4 534 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 LRRC3Q9BY71 257 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 AMBRA1Q9C0C7 1298 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 RAB6CQ9H0N0 254 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 DPEP3Q9H4B8 488 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 RSAD1Q9HA92 442 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 WDR70Q9NW82 654 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 STMN3Q9NZ72 180 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 ZNF229Q9UJW7 825 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 NUP50Q9UKX7 468 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 CAB39Q9Y376 341 aaPredicted RBP5.54□□□□□ -1.52
CSDE1-202ENST00000339438 HCN4Q9Y3Q4 1203 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 A0A0B4J293 547 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 TMEM233B4DJY2 109 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 DSCR3O14972 297 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 RAD51BO15315 384 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 PI15O43692 258 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 TLL1O43897 1013 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 AGXTP21549 392 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 FMO4P31512 558 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 CDH5P33151 784 aaPredicted RBP5.54□□□□□ -1.52
CSDE1-202ENST00000339438 UGT2B10P36537 528 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 MLLT3P42568 568 aaPredicted RBP5.54□□□□□ -1.52
CSDE1-202ENST00000339438 OSTNP61366 133 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 ERVK-21P61565 698 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 NCS1P62166 190 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 TAP1Q03518 808 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 PIGHQ14442 188 aaPredicted RBP5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 182.9 ms