RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 EEF1DP29692 281 aaKnown RBP22.18■■□□□ 1.14
PDLIM2-203ENST00000339162 AGTR2P50052 363 aa22.18■■□□□ 1.14
PDLIM2-203ENST00000339162 HK3P52790 923 aa22.18■■□□□ 1.14
PDLIM2-203ENST00000339162 FNDC3BQ53EP0 1204 aaKnown RBP22.18■■□□□ 1.14
PDLIM2-203ENST00000339162 RAB44Q7Z6P3 723 aaPredicted RBP22.18■■□□□ 1.14
PDLIM2-203ENST00000339162 MARK4Q96L34 752 aa22.18■■□□□ 1.14
PDLIM2-203ENST00000339162 C19orf43Q9BQ61 176 aa22.18■■□□□ 1.14
PDLIM2-203ENST00000339162 MBD1Q9UIS9 605 aaPredicted RBP22.18■■□□□ 1.14
PDLIM2-203ENST00000339162 CDYLQ9Y232 598 aa22.18■■□□□ 1.14
PDLIM2-203ENST00000339162 C16orf96A6NNT2 1141 aa22.18■■□□□ 1.14
PDLIM2-203ENST00000339162 SLCO1B7G3V0H7 640 aa22.18■■□□□ 1.14
PDLIM2-203ENST00000339162 KPNA3O00505 521 aaPredicted RBP22.18■■□□□ 1.14
PDLIM2-203ENST00000339162 HNRNPCL1O60812 293 aaKnown RBP22.18■■□□□ 1.14
PDLIM2-203ENST00000339162 AOC1P19801 751 aa22.18■■□□□ 1.14
PDLIM2-203ENST00000339162 ETV3P41162 512 aa22.18■■□□□ 1.14
PDLIM2-203ENST00000339162 ZNF805Q5CZA5 627 aa22.18■■□□□ 1.14
PDLIM2-203ENST00000339162 Q6ZVL8 140 aa22.18■■□□□ 1.14
PDLIM2-203ENST00000339162 TMPRSS11EQ9UL52 423 aa22.18■■□□□ 1.14
PDLIM2-203ENST00000339162 ITM2BQ9Y287 266 aa22.18■■□□□ 1.14
PDLIM2-203ENST00000339162 ZNF106Q9H2Y7 1883 aaKnown RBP22.17■■□□□ 1.14
PDLIM2-203ENST00000339162 LOC100653049A0A140TA62 436 aa22.17■■□□□ 1.14
PDLIM2-203ENST00000339162 A0A1W2PQ67 120 aa22.17■■□□□ 1.14
PDLIM2-203ENST00000339162 AGAP14A8MT82 685 aa22.17■■□□□ 1.14
PDLIM2-203ENST00000339162 UPK3BL1B0FP48 263 aa22.17■■□□□ 1.14
PDLIM2-203ENST00000339162 UPK3BL2E5RIL1 263 aa22.17■■□□□ 1.14
PDLIM2-203ENST00000339162 MGRN1O60291 552 aa22.17■■□□□ 1.14
PDLIM2-203ENST00000339162 KRT34O76011 436 aa22.17■■□□□ 1.14
PDLIM2-203ENST00000339162 HK2P52789 917 aa22.17■■□□□ 1.14
PDLIM2-203ENST00000339162 SH3BP2P78314 561 aa22.17■■□□□ 1.14
PDLIM2-203ENST00000339162 B4GALNT1Q00973 533 aa22.17■■□□□ 1.14
PDLIM2-203ENST00000339162 BTKQ06187 659 aa22.17■■□□□ 1.14
PDLIM2-203ENST00000339162 TEX9Q8N6V9 391 aa22.17■■□□□ 1.14
PDLIM2-203ENST00000339162 TRPC4APQ8TEL6 797 aa22.17■■□□□ 1.14
PDLIM2-203ENST00000339162 RAB3IPQ96QF0 476 aaPredicted RBP22.17■■□□□ 1.14
PDLIM2-203ENST00000339162 SPATA16Q9BXB7 569 aa22.17■■□□□ 1.14
PDLIM2-203ENST00000339162 THG1LQ9NWX6 298 aaKnown RBP22.17■■□□□ 1.14
PDLIM2-203ENST00000339162 SORCS3Q9UPU3 1222 aa22.17■■□□□ 1.14
PDLIM2-203ENST00000339162 MEI4A8MW99 385 aa22.16■■□□□ 1.14
PDLIM2-203ENST00000339162 MTX2O75431 263 aa22.16■■□□□ 1.14
PDLIM2-203ENST00000339162 XPAP23025 273 aaPredicted RBP22.16■■□□□ 1.14
PDLIM2-203ENST00000339162 VIPR1P32241 457 aa22.16■■□□□ 1.14
PDLIM2-203ENST00000339162 GRIN2CQ14957 1233 aa22.16■■□□□ 1.14
PDLIM2-203ENST00000339162 LYPLAL1Q5VWZ2 237 aa22.16■■□□□ 1.14
PDLIM2-203ENST00000339162 ANKRD54Q6NXT1 300 aa22.16■■□□□ 1.14
PDLIM2-203ENST00000339162 ACAD11Q709F0 780 aa22.16■■□□□ 1.14
PDLIM2-203ENST00000339162 DET1Q7L5Y6 550 aa22.16■■□□□ 1.14
PDLIM2-203ENST00000339162 PARP9Q8IXQ6 854 aa22.16■■□□□ 1.14
PDLIM2-203ENST00000339162 PPP2R3CQ969Q6 453 aa22.16■■□□□ 1.14
PDLIM2-203ENST00000339162 PLEKHG4BQ96PX9 1271 aa22.16■■□□□ 1.14
PDLIM2-203ENST00000339162 GDF15Q99988 308 aa22.16■■□□□ 1.14
PDLIM2-203ENST00000339162 KXD1Q9BQD3 176 aa22.16■■□□□ 1.14
PDLIM2-203ENST00000339162 SDAD1Q9NVU7 687 aaKnown RBP eCLIP22.16■■□□□ 1.14
PDLIM2-203ENST00000339162 CDH7Q9ULB5 785 aa22.16■■□□□ 1.14
PDLIM2-203ENST00000339162 TRAF6Q9Y4K3 522 aa22.16■■□□□ 1.14
PDLIM2-203ENST00000339162 A0A1B0GTL3 188 aa22.16■■□□□ 1.14
PDLIM2-203ENST00000339162 CCDC85CA6NKD9 419 aa22.16■■□□□ 1.14
PDLIM2-203ENST00000339162 SYCE1LA8MT33 242 aa22.16■■□□□ 1.14
PDLIM2-203ENST00000339162 HNRNPH1P31943 449 aaKnown RBP22.16■■□□□ 1.14
PDLIM2-203ENST00000339162 GPSM1Q86YR5 675 aa22.16■■□□□ 1.14
PDLIM2-203ENST00000339162 RBM15BQ8NDT2 890 aaKnown RBP22.16■■□□□ 1.14
PDLIM2-203ENST00000339162 MYADMQ96S97 322 aa22.16■■□□□ 1.14
PDLIM2-203ENST00000339162 COPS8Q99627 209 aa22.16■■□□□ 1.14
PDLIM2-203ENST00000339162 MID1IP1Q9NPA3 183 aa22.16■■□□□ 1.14
PDLIM2-203ENST00000339162 SEMA4BQ9NPR2 832 aaPredicted RBP22.16■■□□□ 1.14
PDLIM2-203ENST00000339162 ZDHHC3Q9NYG2 299 aa22.16■■□□□ 1.14
PDLIM2-203ENST00000339162 PKD2L2Q9NZM6 624 aa22.16■■□□□ 1.14
PDLIM2-203ENST00000339162 CD274Q9NZQ7 290 aa22.16■■□□□ 1.14
PDLIM2-203ENST00000339162 ASB1Q9Y576 335 aa22.16■■□□□ 1.14
PDLIM2-203ENST00000339162 SPECC1L-ADORA2AF8WAN1 911 aa22.15■■□□□ 1.14
PDLIM2-203ENST00000339162 SDHDO14521 159 aa22.15■■□□□ 1.14
PDLIM2-203ENST00000339162 GSC2O15499 205 aa22.15■■□□□ 1.14
PDLIM2-203ENST00000339162 CDK14O94921 469 aa22.15■■□□□ 1.14
PDLIM2-203ENST00000339162 CYP2A6P11509 494 aaPredicted RBP22.15■■□□□ 1.14
PDLIM2-203ENST00000339162 PTPN5P54829 565 aa22.15■■□□□ 1.14
PDLIM2-203ENST00000339162 TBCCQ15814 346 aa22.15■■□□□ 1.14
PDLIM2-203ENST00000339162 ACSBG2Q5FVE4 666 aa22.15■■□□□ 1.14
PDLIM2-203ENST00000339162 EP400NLQ6ZTU2 488 aa22.15■■□□□ 1.14
PDLIM2-203ENST00000339162 PARS2Q7L3T8 475 aaKnown RBP22.15■■□□□ 1.14
PDLIM2-203ENST00000339162 KIAA1958Q8N8K9 716 aa22.15■■□□□ 1.14
PDLIM2-203ENST00000339162 CATSPER2Q96P56 530 aa22.15■■□□□ 1.14
PDLIM2-203ENST00000339162 TRMOQ9BU70 441 aa22.15■■□□□ 1.14
PDLIM2-203ENST00000339162 TRPV4Q9HBA0 871 aa22.15■■□□□ 1.14
PDLIM2-203ENST00000339162 BAIAP2L1Q9UHR4 511 aa22.15■■□□□ 1.14
PDLIM2-203ENST00000339162 TBC1D3BA6NDS4 549 aa22.15■■□□□ 1.14
PDLIM2-203ENST00000339162 PLK4O00444 970 aa22.15■■□□□ 1.14
PDLIM2-203ENST00000339162 NSG1P42857 185 aa22.15■■□□□ 1.14
PDLIM2-203ENST00000339162 FOXA1P55317 472 aa22.15■■□□□ 1.14
PDLIM2-203ENST00000339162 GALNT1Q10472 559 aaPredicted RBP22.15■■□□□ 1.14
PDLIM2-203ENST00000339162 TGFBIQ15582 683 aa22.15■■□□□ 1.14
PDLIM2-203ENST00000339162 PIKFYVEQ9Y2I7 2098 aa22.14■■□□□ 1.14
PDLIM2-203ENST00000339162 SNUPNO95149 360 aaKnown RBP22.14■■□□□ 1.14
PDLIM2-203ENST00000339162 MXRA7P84157 204 aa22.14■■□□□ 1.14
PDLIM2-203ENST00000339162 DLX2Q07687 328 aaPredicted RBP22.14■■□□□ 1.14
PDLIM2-203ENST00000339162 RALGDSQ12967 914 aa22.14■■□□□ 1.14
PDLIM2-203ENST00000339162 ZNF234Q14588 700 aa22.14■■□□□ 1.14
PDLIM2-203ENST00000339162 PDGFRLQ15198 375 aa22.14■■□□□ 1.14
PDLIM2-203ENST00000339162 C18orf21Q32NC0 220 aaPredicted RBP22.14■■□□□ 1.14
PDLIM2-203ENST00000339162 METTL21CQ5VZV1 264 aa22.14■■□□□ 1.14
PDLIM2-203ENST00000339162 MACC1Q6ZN28 852 aa22.14■■□□□ 1.14
PDLIM2-203ENST00000339162 KCNA7Q96RP8 456 aa22.14■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms