RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 C19orf60Q96EN9 201 aa12.46□□□□□ -0.41
LIMK1-201ENST00000336180 CENPOQ9BU64 300 aa12.46□□□□□ -0.41
LIMK1-201ENST00000336180 SEZ6LQ9BYH1 1024 aa12.46□□□□□ -0.41
LIMK1-201ENST00000336180 NSUN3Q9H649 340 aaKnown RBP12.46□□□□□ -0.41
LIMK1-201ENST00000336180 DCLRE1BQ9H816 532 aa12.46□□□□□ -0.41
LIMK1-201ENST00000336180 EBF2Q9HAK2 575 aa12.46□□□□□ -0.41
LIMK1-201ENST00000336180 AXIN1O15169 862 aa12.46□□□□□ -0.42
LIMK1-201ENST00000336180 SNX2O60749 519 aa12.46□□□□□ -0.42
LIMK1-201ENST00000336180 ATP6V1G1O75348 118 aa12.46□□□□□ -0.42
LIMK1-201ENST00000336180 H2AFYO75367 372 aaKnown RBP12.46□□□□□ -0.42
LIMK1-201ENST00000336180 TSPAN12O95859 305 aa12.46□□□□□ -0.42
LIMK1-201ENST00000336180 OLFM2O95897 454 aa12.46□□□□□ -0.42
LIMK1-201ENST00000336180 HLA-EP13747 358 aa12.46□□□□□ -0.42
LIMK1-201ENST00000336180 OGNP20774 298 aaKnown RBP12.46□□□□□ -0.42
LIMK1-201ENST00000336180 HSPA7P48741 367 aa12.46□□□□□ -0.42
LIMK1-201ENST00000336180 MRPS22P82650 360 aaKnown RBP12.46□□□□□ -0.42
LIMK1-201ENST00000336180 MS4A2Q01362 244 aa12.46□□□□□ -0.42
LIMK1-201ENST00000336180 CLCQ05315 142 aa12.46□□□□□ -0.42
LIMK1-201ENST00000336180 CAPRIN1Q14444 709 aaKnown RBP12.46□□□□□ -0.42
LIMK1-201ENST00000336180 RFTN1Q14699 578 aaPredicted RBP12.46□□□□□ -0.42
LIMK1-201ENST00000336180 MPPE1Q53F39 396 aa12.46□□□□□ -0.42
LIMK1-201ENST00000336180 ARHGAP24Q8N264 748 aa12.46□□□□□ -0.42
LIMK1-201ENST00000336180 MRPL43Q8N983 215 aaKnown RBP12.46□□□□□ -0.42
LIMK1-201ENST00000336180 CEP70Q8NHQ1 597 aa12.46□□□□□ -0.42
LIMK1-201ENST00000336180 MMADHCQ9H3L0 296 aaPredicted RBP12.46□□□□□ -0.42
LIMK1-201ENST00000336180 LATS2Q9NRM7 1088 aa12.46□□□□□ -0.42
LIMK1-201ENST00000336180 KIAA1522Q9P206 1035 aaPredicted RBP12.46□□□□□ -0.42
LIMK1-201ENST00000336180 RABL2BQ9UNT1 228 aa12.46□□□□□ -0.42
LIMK1-201ENST00000336180 INSL6Q9Y581 213 aa12.46□□□□□ -0.42
LIMK1-201ENST00000336180 A0A0J9YYE9 177 aa12.45□□□□□ -0.42
LIMK1-201ENST00000336180 A0A1W2PQ67 120 aa12.45□□□□□ -0.42
LIMK1-201ENST00000336180 RGSL1A5PLK6 1076 aa12.45□□□□□ -0.42
LIMK1-201ENST00000336180 KIAA0355O15063 1070 aa12.45□□□□□ -0.42
LIMK1-201ENST00000336180 FZD6O60353 706 aa12.45□□□□□ -0.42
LIMK1-201ENST00000336180 HNRNPCL1O60812 293 aaKnown RBP12.45□□□□□ -0.42
LIMK1-201ENST00000336180 TRBC1P01850 177 aa12.45□□□□□ -0.42
LIMK1-201ENST00000336180 CYBBP04839 570 aa12.45□□□□□ -0.42
LIMK1-201ENST00000336180 HTR6P50406 440 aa12.45□□□□□ -0.42
LIMK1-201ENST00000336180 IL2P60568 153 aa12.45□□□□□ -0.42
LIMK1-201ENST00000336180 TNK2Q07912 1038 aa12.45□□□□□ -0.42
LIMK1-201ENST00000336180 CEACAM7Q14002 265 aa12.45□□□□□ -0.42
LIMK1-201ENST00000336180 VPS26BQ4G0F5 336 aa12.45□□□□□ -0.42
LIMK1-201ENST00000336180 LRRC74BQ6ZQY2 392 aa12.45□□□□□ -0.42
LIMK1-201ENST00000336180 FRA10AC1Q70Z53 315 aa12.45□□□□□ -0.42
LIMK1-201ENST00000336180 SYVN1Q86TM6 617 aa12.45□□□□□ -0.42
LIMK1-201ENST00000336180 GPSM1Q86YR5 675 aa12.45□□□□□ -0.42
LIMK1-201ENST00000336180 OR2AP1Q8NGE2 309 aa12.45□□□□□ -0.42
LIMK1-201ENST00000336180 SPPL3Q8TCT6 385 aa12.45□□□□□ -0.42
LIMK1-201ENST00000336180 EGFL8Q99944 293 aa12.45□□□□□ -0.42
LIMK1-201ENST00000336180 HGH1Q9BTY7 390 aa12.45□□□□□ -0.42
LIMK1-201ENST00000336180 CLPBQ9H078 707 aa12.45□□□□□ -0.42
LIMK1-201ENST00000336180 IGFLR1Q9H665 355 aa12.45□□□□□ -0.42
LIMK1-201ENST00000336180 TDP1Q9NUW8 608 aa12.45□□□□□ -0.42
LIMK1-201ENST00000336180 ZNF225Q9UK10 706 aa12.45□□□□□ -0.42
LIMK1-201ENST00000336180 WASH3PC4AMC7 463 aa12.45□□□□□ -0.42
LIMK1-201ENST00000336180 SH3BGRLO75368 114 aa12.45□□□□□ -0.42
LIMK1-201ENST00000336180 FPGSQ05932 587 aa12.45□□□□□ -0.42
LIMK1-201ENST00000336180 PHKG1Q16816 387 aa12.45□□□□□ -0.42
LIMK1-201ENST00000336180 ATP13A5Q4VNC0 1218 aa12.45□□□□□ -0.42
LIMK1-201ENST00000336180 WLSQ5T9L3 541 aa12.45□□□□□ -0.42
LIMK1-201ENST00000336180 C6orf163Q5TEZ5 329 aa12.45□□□□□ -0.42
LIMK1-201ENST00000336180 CRTC1Q6UUV9 634 aa12.45□□□□□ -0.42
LIMK1-201ENST00000336180 SERPINA13PQ6UXR4 307 aa12.45□□□□□ -0.42
LIMK1-201ENST00000336180 HTR3DQ70Z44 454 aa12.45□□□□□ -0.42
LIMK1-201ENST00000336180 RAB44Q7Z6P3 723 aaPredicted RBP12.45□□□□□ -0.42
LIMK1-201ENST00000336180 GPR150Q8NGU9 434 aa12.45□□□□□ -0.42
LIMK1-201ENST00000336180 FAM110BQ8TC76 370 aa12.45□□□□□ -0.42
LIMK1-201ENST00000336180 UCMAQ8WVF2 138 aa12.45□□□□□ -0.42
LIMK1-201ENST00000336180 ATP6V1E2Q96A05 226 aa12.45□□□□□ -0.42
LIMK1-201ENST00000336180 WDR41Q9HAD4 459 aa12.45□□□□□ -0.42
LIMK1-201ENST00000336180 PIDD1Q9HB75 910 aa12.45□□□□□ -0.42
LIMK1-201ENST00000336180 HACD3Q9P035 362 aa12.45□□□□□ -0.42
LIMK1-201ENST00000336180 ARIH1Q9Y4X5 557 aaPredicted RBP12.45□□□□□ -0.42
LIMK1-201ENST00000336180 GOLGA4Q13439 2230 aaKnown RBP12.45□□□□□ -0.42
LIMK1-201ENST00000336180 RFXAPO00287 272 aa12.45□□□□□ -0.42
LIMK1-201ENST00000336180 IGSF6O95976 241 aa12.45□□□□□ -0.42
LIMK1-201ENST00000336180 CA3P07451 260 aa12.45□□□□□ -0.42
LIMK1-201ENST00000336180 ANPEPP15144 967 aa12.45□□□□□ -0.42
LIMK1-201ENST00000336180 TTPAP49638 278 aa12.45□□□□□ -0.42
LIMK1-201ENST00000336180 CLCN4P51793 760 aa12.45□□□□□ -0.42
LIMK1-201ENST00000336180 HSPA14Q0VDF9 509 aa12.45□□□□□ -0.42
LIMK1-201ENST00000336180 SLC14A2Q15849 920 aa12.45□□□□□ -0.42
LIMK1-201ENST00000336180 INO80DQ53TQ3 878 aaPredicted RBP12.45□□□□□ -0.42
LIMK1-201ENST00000336180 C22orf39Q6P5X5 142 aa12.45□□□□□ -0.42
LIMK1-201ENST00000336180 C12orf40Q86WS4 652 aa12.45□□□□□ -0.42
LIMK1-201ENST00000336180 STAG3L4Q8TBR4 150 aa12.45□□□□□ -0.42
LIMK1-201ENST00000336180 DLG3Q92796 817 aa12.45□□□□□ -0.42
LIMK1-201ENST00000336180 VPS33AQ96AX1 596 aa12.45□□□□□ -0.42
LIMK1-201ENST00000336180 PYCR2Q96C36 320 aa12.45□□□□□ -0.42
LIMK1-201ENST00000336180 TEX37Q96LM6 180 aa12.45□□□□□ -0.42
LIMK1-201ENST00000336180 ATP13A3Q9H7F0 1226 aa12.45□□□□□ -0.42
LIMK1-201ENST00000336180 EML4Q9HC35 981 aaKnown RBP12.45□□□□□ -0.42
LIMK1-201ENST00000336180 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.45□□□□□ -0.42
LIMK1-201ENST00000336180 ZNHIT2Q9UHR6 403 aa12.45□□□□□ -0.42
LIMK1-201ENST00000336180 GLYATL1P3A0A0U1RQE8 302 aa12.44□□□□□ -0.42
LIMK1-201ENST00000336180 PSMD12O00232 456 aaPredicted RBP12.44□□□□□ -0.42
LIMK1-201ENST00000336180 AZIN1O14977 448 aa12.44□□□□□ -0.42
LIMK1-201ENST00000336180 MAGEC1O60732 1142 aa12.44□□□□□ -0.42
LIMK1-201ENST00000336180 HGFP14210 728 aa12.44□□□□□ -0.42
LIMK1-201ENST00000336180 HMGCLP35914 325 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms