RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 CLEC6AQ6EIG7 209 aa16.77■□□□□ 0.28
DDX41-201ENST00000330503 CYHR1Q6ZMK1 362 aa16.77■□□□□ 0.28
DDX41-201ENST00000330503 GPSM1Q86YR5 675 aa16.77■□□□□ 0.28
DDX41-201ENST00000330503 C1orf21Q9H246 121 aa16.77■□□□□ 0.28
DDX41-201ENST00000330503 ZDHHC3Q9NYG2 299 aa16.77■□□□□ 0.28
DDX41-201ENST00000330503 IL36AQ9UHA7 158 aa16.77■□□□□ 0.28
DDX41-201ENST00000330503 SKAP2O75563 359 aaPredicted RBP16.76■□□□□ 0.27
DDX41-201ENST00000330503 FCARP24071 287 aa16.76■□□□□ 0.27
DDX41-201ENST00000330503 PRDX6P30041 224 aa16.76■□□□□ 0.27
DDX41-201ENST00000330503 VIPR1P32241 457 aa16.76■□□□□ 0.27
DDX41-201ENST00000330503 AGTR2P50052 363 aa16.76■□□□□ 0.27
DDX41-201ENST00000330503 B4GALNT1Q00973 533 aa16.76■□□□□ 0.27
DDX41-201ENST00000330503 GPRC6AQ5T6X5 926 aa16.76■□□□□ 0.27
DDX41-201ENST00000330503 GPR149Q86SP6 731 aa16.76■□□□□ 0.27
DDX41-201ENST00000330503 ACTRT2Q8TDY3 377 aa16.76■□□□□ 0.27
DDX41-201ENST00000330503 CATSPER2Q96P56 530 aa16.76■□□□□ 0.27
DDX41-201ENST00000330503 LENG8Q96PV6 779 aaPredicted RBP16.76■□□□□ 0.27
DDX41-201ENST00000330503 PLEKHG4BQ96PX9 1271 aa16.76■□□□□ 0.27
DDX41-201ENST00000330503 C1QTNF3Q9BXJ4 246 aa16.76■□□□□ 0.27
DDX41-201ENST00000330503 DENND2DQ9H6A0 471 aaPredicted RBP16.76■□□□□ 0.27
DDX41-201ENST00000330503 TRPV4Q9HBA0 871 aa16.76■□□□□ 0.27
DDX41-201ENST00000330503 PCDH12Q9NPG4 1184 aa16.76■□□□□ 0.27
DDX41-201ENST00000330503 LOC100653049A0A140TA62 436 aa16.76■□□□□ 0.27
DDX41-201ENST00000330503 A0A1B0GTL3 188 aa16.76■□□□□ 0.27
DDX41-201ENST00000330503 NCF1BA6NI72 391 aaPredicted RBP16.76■□□□□ 0.27
DDX41-201ENST00000330503 NCF1CA8MVU1 366 aaPredicted RBP16.76■□□□□ 0.27
DDX41-201ENST00000330503 STX16-NPEPL1H3BU86 382 aa16.76■□□□□ 0.27
DDX41-201ENST00000330503 STX16O14662 325 aa16.76■□□□□ 0.27
DDX41-201ENST00000330503 KRT34O76011 436 aa16.76■□□□□ 0.27
DDX41-201ENST00000330503 TRIM16O95361 564 aa16.76■□□□□ 0.27
DDX41-201ENST00000330503 FGF4P08620 206 aa16.76■□□□□ 0.27
DDX41-201ENST00000330503 RPS17P08708 135 aaKnown RBP16.76■□□□□ 0.27
DDX41-201ENST00000330503 COX4I1P13073 169 aa16.76■□□□□ 0.27
DDX41-201ENST00000330503 NCF1P14598 390 aaPredicted RBP16.76■□□□□ 0.27
DDX41-201ENST00000330503 GM2AP17900 193 aa16.76■□□□□ 0.27
DDX41-201ENST00000330503 PGM1P36871 562 aa16.76■□□□□ 0.27
DDX41-201ENST00000330503 INHBCP55103 352 aa16.76■□□□□ 0.27
DDX41-201ENST00000330503 SATB1Q01826 763 aa16.76■□□□□ 0.27
DDX41-201ENST00000330503 PPP2R2DQ66LE6 453 aa16.76■□□□□ 0.27
DDX41-201ENST00000330503 TANGO2Q6ICL3 276 aa16.76■□□□□ 0.27
DDX41-201ENST00000330503 GET4Q7L5D6 327 aaPredicted RBP16.76■□□□□ 0.27
DDX41-201ENST00000330503 HSD11B1LQ7Z5J1 315 aa16.76■□□□□ 0.27
DDX41-201ENST00000330503 TRPC4APQ8TEL6 797 aa16.76■□□□□ 0.27
DDX41-201ENST00000330503 CMTM5Q96DZ9 223 aa16.76■□□□□ 0.27
DDX41-201ENST00000330503 ABCG8Q9H221 673 aa16.76■□□□□ 0.27
DDX41-201ENST00000330503 HPS4Q9NQG7 708 aa16.76■□□□□ 0.27
DDX41-201ENST00000330503 DZANK1Q9NVP4 752 aa16.76■□□□□ 0.27
DDX41-201ENST00000330503 GDE1Q9NZC3 331 aa16.76■□□□□ 0.27
DDX41-201ENST00000330503 CD84Q9UIB8 345 aa16.76■□□□□ 0.27
DDX41-201ENST00000330503 SLC8A2Q9UPR5 921 aa16.76■□□□□ 0.27
DDX41-201ENST00000330503 CDH23Q9H251 3354 aa16.76■□□□□ 0.27
DDX41-201ENST00000330503 RANBP2P49792 3224 aaKnown RBP16.76■□□□□ 0.27
DDX41-201ENST00000330503 MEI4A8MW99 385 aa16.75■□□□□ 0.27
DDX41-201ENST00000330503 NFATC1O95644 943 aa16.75■□□□□ 0.27
DDX41-201ENST00000330503 PIK3R1P27986 724 aa16.75■□□□□ 0.27
DDX41-201ENST00000330503 CLCQ05315 142 aa16.75■□□□□ 0.27
DDX41-201ENST00000330503 ZNF805Q5CZA5 627 aa16.75■□□□□ 0.27
DDX41-201ENST00000330503 CLYBLQ8N0X4 340 aa16.75■□□□□ 0.27
DDX41-201ENST00000330503 CEP70Q8NHQ1 597 aa16.75■□□□□ 0.27
DDX41-201ENST00000330503 ASB2Q96Q27 587 aa16.75■□□□□ 0.27
DDX41-201ENST00000330503 CDCA3Q99618 268 aaPredicted RBP16.75■□□□□ 0.27
DDX41-201ENST00000330503 MID1IP1Q9NPA3 183 aa16.75■□□□□ 0.27
DDX41-201ENST00000330503 IGLV3-16A0A075B6K0 115 aa16.75■□□□□ 0.27
DDX41-201ENST00000330503 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.75■□□□□ 0.27
DDX41-201ENST00000330503 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.75■□□□□ 0.27
DDX41-201ENST00000330503 UPK3BL1B0FP48 263 aa16.75■□□□□ 0.27
DDX41-201ENST00000330503 UPK3BL2E5RIL1 263 aa16.75■□□□□ 0.27
DDX41-201ENST00000330503 LINC01565O15544 149 aa16.75■□□□□ 0.27
DDX41-201ENST00000330503 WFS1O76024 890 aa16.75■□□□□ 0.27
DDX41-201ENST00000330503 CYP2A6P11509 494 aaPredicted RBP16.75■□□□□ 0.27
DDX41-201ENST00000330503 COPAP53621 1224 aa16.75■□□□□ 0.27
DDX41-201ENST00000330503 FOXA1P55317 472 aa16.75■□□□□ 0.27
DDX41-201ENST00000330503 SLC25A3Q00325 362 aa16.75■□□□□ 0.27
DDX41-201ENST00000330503 ACSBG2Q5FVE4 666 aa16.75■□□□□ 0.27
DDX41-201ENST00000330503 WASHC2DQ5SRD0 308 aa16.75■□□□□ 0.27
DDX41-201ENST00000330503 ZDHHC20Q5W0Z9 365 aa16.75■□□□□ 0.27
DDX41-201ENST00000330503 ANKS6Q68DC2 871 aa16.75■□□□□ 0.27
DDX41-201ENST00000330503 SBSNQ6UWP8 590 aa16.75■□□□□ 0.27
DDX41-201ENST00000330503 CHSY3Q70JA7 882 aa16.75■□□□□ 0.27
DDX41-201ENST00000330503 SFTPA1Q8IWL2 248 aa16.75■□□□□ 0.27
DDX41-201ENST00000330503 PELI3Q8N2H9 469 aa16.75■□□□□ 0.27
DDX41-201ENST00000330503 AFAP1L2Q8N4X5 818 aa16.75■□□□□ 0.27
DDX41-201ENST00000330503 ZNF483Q8TF39 744 aaPredicted RBP16.75■□□□□ 0.27
DDX41-201ENST00000330503 MCUR1Q96AQ8 359 aa16.75■□□□□ 0.27
DDX41-201ENST00000330503 MARK4Q96L34 752 aa16.75■□□□□ 0.27
DDX41-201ENST00000330503 MMADHCQ9H3L0 296 aaPredicted RBP16.75■□□□□ 0.27
DDX41-201ENST00000330503 LATS2Q9NRM7 1088 aa16.75■□□□□ 0.27
DDX41-201ENST00000330503 DKK3Q9UBP4 350 aa16.75■□□□□ 0.27
DDX41-201ENST00000330503 MBD1Q9UIS9 605 aaPredicted RBP16.75■□□□□ 0.27
DDX41-201ENST00000330503 TSR3Q9UJK0 312 aaKnown RBP16.75■□□□□ 0.27
DDX41-201ENST00000330503 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.75■□□□□ 0.27
DDX41-201ENST00000330503 C16orf96A6NNT2 1141 aa16.74■□□□□ 0.27
DDX41-201ENST00000330503 MAGEC1O60732 1142 aa16.74■□□□□ 0.27
DDX41-201ENST00000330503 ZNF30P17039 623 aa16.74■□□□□ 0.27
DDX41-201ENST00000330503 NSG1P42857 185 aa16.74■□□□□ 0.27
DDX41-201ENST00000330503 MNAT1P51948 309 aa16.74■□□□□ 0.27
DDX41-201ENST00000330503 ARHGEF7Q14155 803 aa16.74■□□□□ 0.27
DDX41-201ENST00000330503 TGFBIQ15582 683 aa16.74■□□□□ 0.27
DDX41-201ENST00000330503 POM121L1PQ3SYA9 428 aa16.74■□□□□ 0.27
DDX41-201ENST00000330503 NAIF1Q69YI7 327 aaPredicted RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms